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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAN2B1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
90.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
73.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
65.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
55.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
52.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
52.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
49.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
44.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
44.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
43.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
43.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
40.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
40.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
39.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
38.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
36.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
35.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
35.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
34.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
33.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
33.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
32.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
30.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
30.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
29.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
28.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
28.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
26.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
25.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
24.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
22.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
21.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
20.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
19.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAN2B1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
131.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
127.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
126.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
125.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
110.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
103.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
99.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
99.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
98.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
95.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
92.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
87.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
86.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
85.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
84.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
83.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
83.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
82.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
81.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
81.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
81.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
80.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
80.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
79.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
79.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
78.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
78.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
77.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
77.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
77.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
76.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
76.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
74.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
74.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
74.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
74.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
74.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
72.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
72.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
71.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
71.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
70.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
70.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
70.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
70.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
69.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
69.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
68.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
68.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
67.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
67.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
67.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
66.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
66.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
66.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
65.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
65.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
65.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
65.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
65.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
64.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
64.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
63.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
63.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
63.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
63.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
62.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
62.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
62.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
62.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
62.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
62.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
62.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
61.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
61.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
60.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
60.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
60.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
60.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
60.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
60.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
59.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
59.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
59.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
59.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
59.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
59.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
59.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
58.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
58.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
58.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
57.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
57.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
57.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
57.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
57.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
56.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
56.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
56.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
56.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
56.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
56.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
56.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
55.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
55.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
55.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
55.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
55.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
54.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
54.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
54.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
54.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
53.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
53.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
53.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
52.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
52.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
52.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
52.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
52.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
51.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
51.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
51.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
51.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
50.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
50.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
50.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
50.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
50.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
50.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
50.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
49.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
49.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
49.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
49.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
49.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
49.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
49.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
49.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
49.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
49.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
49.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
49.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
48.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
48.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
48.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
48.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
48.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
48.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
48.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
48.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
47.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
47.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
47.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
47.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
47.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
47.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
47.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
47.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
47.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
46.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
46.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
46.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
46.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
46.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
46.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
46.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
46.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
46.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
46.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
45.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
45.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
45.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
45.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
45.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
45.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
45.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
45.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
45.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
45.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
45.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
45.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
44.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
44.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
44.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
44.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
44.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
44.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
44.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
44.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
44.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
43.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
43.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
43.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
43.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
43.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
43.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
43.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
43.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
42.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
42.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
42.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
42.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
42.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
41.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
41.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
41.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
41.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
41.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
41.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
40.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
40.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
40.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
40.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
40.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
40.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
40.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
40.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
40.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
40.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
40.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
40.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
40.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
39.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
39.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
39.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
39.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
39.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
39.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
39.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
39.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
39.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
39.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
39.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
39.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
39.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
39.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
39.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
38.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
38.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
38.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
38.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
38.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
38.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
38.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
38.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
37.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
37.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
37.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
37.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
37.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
37.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
36.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
36.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
36.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
36.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
36.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
36.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
36.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
35.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
35.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
35.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
35.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
35.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
35.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
35.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
34.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
34.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
34.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
34.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
34.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
34.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
34.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
34.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
34.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
34.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
34.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
34.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
34.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
33.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
33.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
33.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
33.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
32.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
32.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
32.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
32.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
32.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
32.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
32.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
32.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
32.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
31.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
31.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
31.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
31.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
31.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
30.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
30.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
30.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
30.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
30.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
30.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
29.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
29.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
28.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
28.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
28.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
28.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
28.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
27.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
27.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
27.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
27.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
27.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
27.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
27.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
27.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
27.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
27.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
26.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
26.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
26.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
26.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
26.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
26.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
25.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
24.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
24.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
23.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
23.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
23.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
23.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
22.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
22.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
21.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
21.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
20.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
20.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
12.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
12.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAN2B1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
129.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
120.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
104.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
96.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
94.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
89.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
86.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
85.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
85.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
84.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
79.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
79.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
75.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
74.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
71.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
70.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
69.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
66.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
65.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
62.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
61.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
61.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
60.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
59.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
59.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
58.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
57.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
56.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
56.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
56.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
53.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
52.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
51.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
50.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
49.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
49.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
48.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
48.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
47.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
47.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
47.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
47.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
46.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
44.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
44.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
43.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
43.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
42.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
42.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
40.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
39.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
38.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
37.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
36.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
36.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
34.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
34.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
33.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
32.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
31.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
30.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
29.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
28.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAN2B1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
176.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
162.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
144.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
134.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
130.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
105.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
100.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
100.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
99.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
91.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
90.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
90.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
88.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
86.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
86.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
85.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
84.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
83.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
82.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
81.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
80.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
78.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
78.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
75.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
73.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
71.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
69.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
69.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
69.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
69.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
68.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
68.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
68.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
68.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
66.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
65.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
65.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
64.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
64.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
64.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
64.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
63.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
63.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
63.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
63.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
62.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
61.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
60.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
60.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
60.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
59.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
59.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
57.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
57.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
56.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
56.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
56.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
56.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
55.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
54.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
54.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
54.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
54.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
54.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
54.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
54.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
53.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
52.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
52.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
52.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
52.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
52.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
52.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
52.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
51.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
51.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
51.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
50.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
50.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
49.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
49.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
49.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
49.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
48.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
48.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
48.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
48.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
48.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
48.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
48.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
47.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
47.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
46.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
46.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
46.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
46.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
45.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
45.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
45.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
45.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
45.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
44.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
44.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
44.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
44.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
44.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
43.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
43.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
43.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
43.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
43.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
43.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
43.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
43.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
43.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
42.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
42.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
42.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
42.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
42.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
41.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
41.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
41.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
41.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
41.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
41.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
41.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
41.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
40.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
40.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
40.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
40.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
39.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
39.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
38.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
38.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
38.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
38.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
37.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
37.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
36.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
35.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
35.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
35.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
35.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
35.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
34.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
34.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
34.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
34.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
34.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
33.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
33.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
33.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
33.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
33.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
33.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
33.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
32.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
32.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
32.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
32.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
31.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
31.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
30.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
30.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
30.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
30.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
29.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
29.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
29.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
29.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
29.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
28.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
28.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
28.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
27.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
27.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
27.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
27.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
27.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
27.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
26.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
26.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
26.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
26.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
24.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
24.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
23.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
23.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
22.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
22.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
20.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
20.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
19.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
18.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
17.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
3.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
1.5
CPT0088550004
Tumor
1.1
CPT0078660003
Tumor
0.7
CPT0012180003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0026420001
Normal
0.5
CPT0081880003
Tumor
0.5
CPT0079180003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0088920001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0010110003
Tumor
0.4
CPT0010120001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0020120003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0063330001
Normal
0.4
CPT0066480003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0010170001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0088780001
Normal
0.3
CPT0065430003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0014470001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0025050003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0006730001
Normal
0.2
CPT0064370003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0015730003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0088500001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0019990003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0077500001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0075720003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0001510001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0000790001
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0086890003
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0079510001
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0025110003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0064400001
Normal
-0.4
CPT0012370003
Tumor
-0.4
CPT0088900003
Tumor
-0.5
CPT0012900004
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0077490003
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0009000003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0069000003
Tumor
-0.6
CPT0088970003
Tumor
-0.6
CPT0079270003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0002270011
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
