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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAN2B1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
122.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
108.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
107.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
82.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
81.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
81.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
78.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
76.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
73.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
71.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
70.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
68.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
66.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
65.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
64.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
64.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
64.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
64.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
63.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
63.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
62.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
62.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
60.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
58.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
58.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
57.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
57.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
54.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
53.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
52.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
52.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
52.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
51.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
50.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
50.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
49.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
49.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
48.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
48.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
48.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
47.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
47.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
46.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
45.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
45.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
45.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
44.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
44.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
44.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
44.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
44.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
44.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
44.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
43.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
43.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
43.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
43.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
43.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
42.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
42.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
42.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
42.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
42.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
42.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
42.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
41.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
41.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
40.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
40.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
40.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
39.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
39.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
39.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
39.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
39.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
39.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
39.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
39.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
39.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
39.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
39.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
39.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
39.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
39.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
38.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
38.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
38.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
38.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
38.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
38.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
37.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
37.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
37.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
37.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
37.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
37.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
37.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
37.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
37.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
37.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
37.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
36.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
36.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
35.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
35.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
35.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
34.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
34.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
34.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
34.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
34.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
34.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
34.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
34.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
34.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
33.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
33.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
33.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
33.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
32.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
32.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
32.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
32.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
32.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
32.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
32.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
32.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
32.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
32.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
32.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
31.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
31.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
31.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
31.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
31.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
31.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
31.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
31.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
30.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
30.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
30.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
30.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
30.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
30.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
30.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
30.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
30.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
30.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
30.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
29.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
29.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
29.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
29.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
29.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
29.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
29.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
28.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
28.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
28.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
28.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
28.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
28.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
28.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
28.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
28.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
28.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
28.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
28.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
28.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
27.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
27.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
27.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
27.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
27.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
26.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
26.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
26.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
26.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
26.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
26.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
26.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
26.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
25.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
25.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
25.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
25.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
25.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
25.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
25.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
25.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
25.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
25.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
24.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
24.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
24.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
24.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
24.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
24.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
24.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
24.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
24.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
24.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
24.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
24.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
24.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
24.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
24.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
24.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
23.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
23.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
23.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
23.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
23.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
23.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
23.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
23.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
23.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
23.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
22.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
22.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
22.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
22.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
22.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
22.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
22.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
22.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
22.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
22.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
22.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
22.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
22.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
22.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
22.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
22.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
22.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
21.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
21.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
21.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
21.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
21.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
21.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
21.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
21.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
21.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
21.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
21.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
20.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
20.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
20.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
20.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
20.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
20.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
19.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
19.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
19.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
18.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
18.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
18.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
18.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
18.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
17.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
17.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
17.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
17.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
17.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
17.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
17.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
17.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
17.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
17.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
17.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
16.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
16.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
16.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
16.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
15.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
15.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
15.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
15.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
14.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
14.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
14.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
13.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
13.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
13.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
13.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
12.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
12.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
12.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
12.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
11.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
11.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAN2B1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.1
Number of samples
231
Samples
Sample
Description
TPM
DO23523
0 years, male, NA, stage:3, alive, 1080 days
137.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
98.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
95.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
94.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
77.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
74.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
68.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
65.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
64.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
64.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
62.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
62.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
61.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
60.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
58.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
56.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
56.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
53.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
53.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
53.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
52.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
52.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
50.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
49.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
47.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
45.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
45.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
44.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
44.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
44.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
44.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
43.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
42.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
42.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
42.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
42.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
42.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
41.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
41.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
41.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
41.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
40.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
40.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
40.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
40.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
40.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
39.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
39.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
39.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
39.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
39.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
39.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
38.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
38.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
38.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
38.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
38.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
37.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
37.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
37.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
37.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
37.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
37.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
37.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
37.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
36.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
36.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
36.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
35.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
35.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
35.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
35.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
35.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
35.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
34.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
34.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
34.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
33.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
33.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
33.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
33.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
32.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
32.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
32.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
32.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
32.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
32.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
32.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
32.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
31.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
31.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
31.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
31.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
31.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
31.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
31.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
31.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
31.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
30.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
30.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
30.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
30.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
30.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
30.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
30.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
29.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
29.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
29.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
29.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
29.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
29.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
29.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
28.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
28.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
28.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
27.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
27.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
27.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
27.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
27.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
27.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
27.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
27.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
27.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
26.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
26.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
26.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
26.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
25.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
25.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
24.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
24.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
24.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
24.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
24.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
24.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
24.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
24.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
24.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
24.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
23.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
23.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
23.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
23.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
23.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
23.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
23.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
23.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
22.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
22.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
22.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
22.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
22.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
22.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
22.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
22.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
22.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
22.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
21.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
21.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
21.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
21.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
21.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
21.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
21.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
21.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
20.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
20.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
20.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
20.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
19.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
19.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
19.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
19.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
19.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
18.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
18.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
18.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
18.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
17.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
17.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
17.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
17.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
17.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
16.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
16.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
16.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
16.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
15.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
15.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
15.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
14.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
14.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
11.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
9.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
7.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
1.5
363
Tumor
1.0
451
Tumor
1.0
477
Tumor
1.0
743
Tumor
0.8
137
Tumor
0.8
221
Tumor
0.7
641
Tumor
0.7
277
Tumor
0.6
425
Tumor
0.6
983
Tumor
0.6
395
Tumor
0.5
443
Tumor
0.5
445
Tumor
0.5
111
Normal
0.5
141
Tumor
0.5
713
Tumor
0.5
975
Tumor
0.5
463
Tumor
0.4
462
Normal
0.4
697
Tumor
0.4
661
Tumor
0.4
867
Tumor
0.4
471
Tumor
0.4
881
Tumor
0.4
1025
Tumor
0.4
131
Tumor
0.4
426
Normal
0.4
568
Normal
0.4
464
Normal
0.4
123
Tumor
0.3
376
Normal
0.3
311
Tumor
0.3
394
Normal
0.3
528
Normal
0.3
421
Tumor
0.3
526
Normal
0.3
428
Normal
0.3
414
Normal
0.3
564
Normal
0.3
434
Normal
0.3
466
Normal
0.3
917
Tumor
0.3
461
Tumor
0.3
937
Tumor
0.3
755
Tumor
0.3
666
Normal
0.3
482
Normal
0.3
362
Normal
0.3
132
Normal
0.3
136
Normal
0.3
954
Normal
0.3
354
Normal
0.3
314
Normal
0.3
356
Normal
0.3
617
Tumor
0.3
262
Normal
0.3
686
Normal
0.3
864
Normal
0.3
618
Normal
0.3
868
Normal
0.3
114
Normal
0.3
978
Normal
0.3
696
Normal
0.2
715
Tumor
0.2
222
Normal
0.2
514
Normal
0.2
268
Normal
0.2
285
Tumor
0.2
212
Normal
0.2
468
Normal
0.2
271
Tumor
0.2
858
Normal
0.2
145
Tumor
0.2
162
Normal
0.2
171
Tumor
0.2
424
Normal
0.2
353
Tumor
0.2
452
Normal
0.2
433
Tumor
0.2
456
Normal
0.2
361
Tumor
0.2
912
Normal
0.2
882
Normal
0.2
714
Normal
0.2
344
Normal
0.2
286
Normal
0.2
258
Normal
0.2
878
Normal
0.2
352
Normal
0.2
297
Tumor
0.2
223
Tumor
0.2
616
Normal
0.2
723
Tumor
0.2
474
Normal
0.2
392
Normal
0.2
1016
Normal
0.2
756
Normal
0.2
866
Normal
0.2
884
Normal
0.2
342
Normal
0.2
396
Normal
0.2
364
Normal
0.2
188
Normal
0.2
261
Tumor
0.2
138
Normal
0.2
358
Normal
0.2
742
Normal
0.2
1046
Normal
0.2
218
Normal
0.2
172
Normal
0.2
187
Tumor
0.2
672
Normal
0.1
126
Normal
0.1
1043
Tumor
0.1
192
Normal
0.1
648
Normal
0.1
128
Normal
0.1
922
Normal
0.1
386
Normal
0.1
446
Normal
0.1
685
Tumor
0.1
824
Normal
0.1
636
Normal
0.1
911
Tumor
0.1
862
Normal
0.1
444
Normal
0.1
191
Tumor
0.1
546
Normal
0.1
195
Tumor
0.1
518
Normal
0.1
926
Normal
0.1
938
Normal
0.1
186
Normal
0.1
721
Tumor
0.1
536
Normal
0.1
524
Normal
0.1
642
Normal
0.1
722
Normal
0.1
142
Normal
0.1
312
Normal
0.1
863
Tumor
0.1
146
Normal
0.1
664
Normal
0.1
913
Tumor
0.1
455
Tumor
0.1
967
Tumor
0.1
415
Tumor
0.1
716
Normal
0.1
224
Normal
0.1
918
Normal
0.1
267
Tumor
0.1
232
Normal
0.1
217
Tumor
0.1
448
Normal
0.1
432
Normal
0.1
467
Tumor
0.1
283
Tumor
0.1
147
Tumor
0.1
493
Tumor
0.1
728
Normal
0.1
944
Normal
0.1
366
Normal
0.1
916
Normal
0.1
662
Normal
0.1
228
Normal
0.1
278
Normal
0.1
412
Normal
0.1
388
Normal
0.1
298
Normal
0.1
436
Normal
0.1
148
Normal
0.1
778
Normal
0.1
1028
Normal
0.1
422
Normal
0.1
647
Tumor
0.1
332
Normal
0.1
328
Normal
0.1
498
Normal
0.1
558
Normal
0.1
534
Normal
0.1
284
Normal
0.1
553
Tumor
0.1
368
Normal
0.1
367
Tumor
0.1
385
Tumor
0.0
447
Tumor
0.0
384
Normal
0.0
272
Normal
0.0
423
Tumor
0.0
984
Normal
0.0
727
Tumor
0.0
852
Normal
0.0
214
Normal
0.0
416
Normal
0.0
535
Tumor
0.0
976
Normal
0.0
196
Normal
0.0
966
Normal
0.0
921
Tumor
0.0
478
Normal
0.0
185
Tumor
0.0
1015
Tumor
0.0
343
Tumor
0.0
124
Normal
0.0
786
Normal
0.0
465
Tumor
0.0
375
Tumor
0.0
746
Normal
0.0
1022
Normal
0.0
877
Tumor
0.0
1014
Normal
0.0
724
Normal
0.0
744
Normal
0.0
516
Normal
0.0
1031
Tumor
0.0
628
Normal
0.0
1042
Normal
0.0
341
Tumor
0.0
411
Tumor
0.0
413
Tumor
0.0
857
Tumor
0.0
914
Normal
0.0
738
Normal
0.0
964
Normal
0.0
924
Normal
0.0
494
Normal
0.0
472
Normal
0.0
615
Tumor
0.0
1044
Normal
0.0
538
Normal
0.0
557
Tumor
0.0
484
Normal
0.0
257
Tumor
0.0
523
Tumor
0.0
968
Normal
0.0
814
Normal
0.0
492
Normal
0.0
545
Tumor
0.0
327
Tumor
0.0
955
Tumor
-0.1
818
Normal
-0.1
517
Tumor
-0.1
1032
Normal
-0.1
113
Tumor
-0.1
963
Tumor
-0.1
331
Tumor
-0.1
952
Normal
-0.1
481
Tumor
-0.1
515
Tumor
-0.1
488
Normal
-0.1
383
Tumor
-0.1
956
Normal
-0.1
823
Tumor
-0.1
365
Tumor
-0.1
574
Normal
-0.1
125
Tumor
-0.1
527
Tumor
-0.1
213
Tumor
-0.1
393
Tumor
-0.1
883
Tumor
-0.1
785
Tumor
-0.1
943
Tumor
-0.1
161
Tumor
-0.1
737
Tumor
-0.1
1026
Normal
-0.1
1045
Tumor
-0.1
698
Normal
-0.1
435
Tumor
-0.1
695
Tumor
-0.2
127
Tumor
-0.2
982
Normal
-0.2
112
Tumor
-0.2
923
Tumor
-0.2
745
Tumor
-0.2
816
Normal
-0.2
965
Tumor
-0.2
635
Tumor
-0.2
874
Normal
-0.2
231
Tumor
-0.2
525
Tumor
-0.2
387
Tumor
-0.2
977
Tumor
-0.2
483
Tumor
-0.2
671
Tumor
-0.2
563
Tumor
-0.2
958
Normal
-0.2
427
Tumor
-0.2
135
Tumor
-0.2
915
Tumor
-0.2
1021
Tumor
-0.3
851
Tumor
-0.3
227
Tumor
-0.3
391
Tumor
-0.3
572
Normal
-0.3
817
Tumor
-0.3
665
Tumor
-0.3
815
Tumor
-0.3
554
Normal
-0.3
431
Tumor
-0.3
861
Tumor
-0.3
533
Tumor
-0.3
491
Tumor
-0.3
567
Tumor
-0.3
951
Tumor
-0.4
627
Tumor
-0.4
573
Tumor
-0.4
357
Tumor
-0.4
663
Tumor
-0.4
355
Tumor
-0.4
777
Tumor
-0.4
537
Tumor
-0.5
873
Tumor
-0.5
953
Tumor
-0.5
351
Tumor
-0.5
313
Tumor
-0.5
497
Tumor
-0.5
487
Tumor
-0.5
813
Tumor
-0.5
865
Tumor
-0.5
473
Tumor
-0.5
1041
Tumor
-0.5
925
Tumor
-0.7
513
Tumor
-0.7
1027
Tumor
-0.7
957
Tumor
-0.7
741
Tumor
-0.7
981
Tumor
-0.8
1013
Tumor
-1.0
571
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
