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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUSC3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
105.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
65.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
39.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
25.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
23.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
22.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
17.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
8.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
2.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUSC3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
144.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
94.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
85.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
77.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
77.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
76.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
73.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
72.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
66.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
64.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
61.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
61.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
60.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
59.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
58.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
58.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
57.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
57.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
57.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
57.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
56.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
56.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
56.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
55.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
54.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
54.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
54.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
54.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
53.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
53.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
53.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
53.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
53.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
53.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
53.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
52.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
52.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
52.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
52.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
52.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
52.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
51.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
51.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
51.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
50.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
49.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
49.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
48.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
48.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
48.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
48.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
47.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
47.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
46.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
46.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
46.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
46.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
45.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
45.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
44.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
44.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
44.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
43.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
43.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
43.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
42.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
42.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
42.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
42.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
42.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
41.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
41.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
41.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
41.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
41.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
41.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
40.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
39.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
39.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
39.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
39.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
38.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
38.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
38.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
38.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
38.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
38.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
37.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
37.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
37.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
37.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
37.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
36.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
36.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
35.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
35.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
35.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
35.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
35.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
35.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
35.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
35.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
34.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
34.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
34.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
34.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
34.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
34.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
33.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
33.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
33.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
33.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
33.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
33.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
32.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
32.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
32.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
32.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
31.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
31.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
31.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
31.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
31.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
31.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
31.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
31.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
31.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
31.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
31.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
31.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
31.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
30.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
30.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
30.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
30.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
30.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
30.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
29.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
29.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
29.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
28.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
28.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
28.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
28.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
28.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
28.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
28.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
27.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
27.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
26.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
26.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
25.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
25.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
25.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
25.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
25.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
25.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
25.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
24.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
24.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
24.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
24.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
24.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
24.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
23.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
22.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
22.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
22.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
22.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
22.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
20.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
20.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
20.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
20.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
17.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
13.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
8.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
8.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
8.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
7.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
7.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
7.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
7.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
6.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
6.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
6.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
6.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
6.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
6.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
6.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
6.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
5.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
5.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
5.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
5.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
5.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
5.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
5.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
5.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
4.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
4.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
4.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
4.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
4.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
4.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
3.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
3.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
3.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
2.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
2.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
2.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
2.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
2.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
2.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
2.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
2.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
2.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
2.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
1.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUSC3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
84.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
75.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
74.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
65.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
62.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
55.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
52.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
50.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
48.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
47.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
46.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
46.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
45.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
45.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
44.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
44.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
43.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
43.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
41.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
40.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
38.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
36.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
34.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
33.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
30.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
30.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
29.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
29.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
27.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
9.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
9.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
7.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
7.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
5.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
5.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
4.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
4.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
3.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
3.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUSC3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
210.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
154.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
154.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
147.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
131.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
131.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
128.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
119.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
117.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
116.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
114.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
105.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
102.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
101.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
100.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
97.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
97.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
97.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
95.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
93.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
89.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
89.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
89.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
88.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
85.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
85.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
82.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
81.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
81.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
80.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
79.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
79.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
79.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
78.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
78.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
78.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
78.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
78.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
78.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
78.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
77.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
76.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
75.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
75.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
75.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
74.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
72.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
72.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
71.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
70.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
69.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
69.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
68.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
68.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
67.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
67.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
66.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
66.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
64.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
64.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
64.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
63.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
63.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
63.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
63.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
62.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
62.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
62.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
62.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
61.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
61.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
61.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
61.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
60.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
59.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
59.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
59.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
58.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
58.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
58.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
58.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
58.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
58.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
57.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
57.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
57.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
57.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
57.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
56.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
55.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
55.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
55.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
55.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
54.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
54.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
54.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
53.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
53.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
53.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
53.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
53.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
52.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
52.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
52.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
52.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
52.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
51.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
50.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
50.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
50.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
49.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
49.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
48.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
48.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
48.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
48.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
48.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
47.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
47.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
47.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
47.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
46.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
46.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
46.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
45.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
45.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
45.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
45.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
45.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
44.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
44.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
43.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
43.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
43.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
43.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
42.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
42.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
41.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
41.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
41.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
41.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
41.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
40.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
40.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
40.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
39.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
39.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
38.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
38.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
38.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
38.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
37.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
37.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
37.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
37.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
37.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
37.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
36.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
36.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
36.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
36.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
36.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
35.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
35.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
35.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
35.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
35.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
35.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
35.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
35.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
34.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
34.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
34.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
34.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
33.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
32.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
32.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
30.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
30.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
29.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
29.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
28.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
28.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
27.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
27.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
27.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
27.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
27.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
26.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
25.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
25.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
24.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
24.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
23.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
22.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
16.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
13.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
3.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0023690003
Tumor
1.4
CPT0002350011
Tumor
1.2
CPT0075560003
Tumor
1.1
CPT0088970003
Tumor
0.9
CPT0086950003
Tumor
0.8
CPT0000790001
Normal
0.8
CPT0081880003
Tumor
0.8
CPT0088690003
Tumor
0.8
CPT0092790003
Tumor
0.7
CPT0025290003
Tumor
0.7
CPT0020120003
Tumor
0.6
CPT0065690003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0088780001
Normal
0.5
CPT0025170003
Tumor
0.4
CPT0088710001
Normal
0.4
CPT0010160003
Tumor
0.4
CPT0001550001
Normal
0.4
CPT0088640003
Normal
0.3
CPT0019990003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0078670001
Normal
0.3
CPT0006900003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0086970003
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0089480003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0089460004
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0078930003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0066470004
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0000780007
Tumor
-0.3
CPT0064400001
Normal
-0.3
CPT0026410003
Tumor
-0.3
CPT0092800003
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0020020001
Normal
-0.5
CPT0077490003
Tumor
-0.5
CPT0075570001
Normal
-0.5
CPT0078840001
Normal
-0.6
CPT0001340003
Tumor
-0.7
CPT0081600003
Tumor
-0.8
CPT0078830003
Tumor
-0.9
CPT0023710001
Normal
-0.9
CPT0081620001
Normal
-0.9
CPT0010120001
Normal
-0.9
CPT0077500001
Normal
-1.0
CPT0010110003
Tumor
-1.1
CPT0006950001
Normal
-1.2
CPT0025610001
Normal
-1.6
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0079000001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0007470001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0078990003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
