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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
88.8
nTPM
HPA Brain:
215.3
nTPM
GTEx:
88.8
nTPM
FANTOM5:
173.5
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
215.3
Sample id
Sample description
nTPM
Amygdala nTPM: 195.0
2814
Male, age 76, right hemisphere
582.3
2695
Female, age 67, right hemisphere
142.6
2517
Female, age 94, left hemisphere
112.1
1987
Female, age 91, left hemisphere
74.0
2514
Male, age 75, right hemisphere
64.2
Basal amygdala nTPM: 203.3
1955
Male, age 76, both hemispheres
327.0
2243
Female, age 91, right hemisphere
307.9
2110
Male, age 80, left hemisphere
211.8
2685
Female, age 94, left hemisphere
193.3
2827
Female, age 67, right hemisphere
114.3
2609
Male, age 75, right hemisphere
65.2
Central amygdala nTPM: 215.3
1905
Male, age 76, both hemispheres
563.5
2239
Male, age 80, left hemisphere
221.4
2701
Female, age 91, right hemisphere
140.2
2826
Female, age 94, left hemisphere
99.0
2515
Male, age 75, right hemisphere
52.5
Corticomedial amygdala nTPM: 183.9
2240
Male, age 76, both hemispheres
398.4
2242
Female, age 91, right hemisphere
225.0
2829
Male, age 80, left hemisphere
195.7
2535
Female, age 67, right hemisphere
120.2
2429
Female, age 94, left hemisphere
105.5
2428
Male, age 75, right hemisphere
58.5
Lateral amygdala nTPM: 212.5
1883
Male, age 76, both hemispheres
692.7
2534
Female, age 94, left hemisphere
192.8
2255
Female, age 91, right hemisphere
142.3
2256
Male, age 80, left hemisphere
138.3
2830
Female, age 67, right hemisphere
63.7
2516
Male, age 75, right hemisphere
45.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
88.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 88.8
Samples: 152
Max nTPM: 471.6
Min nTPM: 6.0
Std nTPM: 76.3
Median nTPM: 65.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
471.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
419.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
356.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
349.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
301.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
230.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
226.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
225.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
210.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
197.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
193.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
192.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
191.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
189.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
187.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
186.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
185.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
166.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
164.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
162.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
161.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
160.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
160.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
157.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
143.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
142.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
141.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
140.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
136.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
135.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
135.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
133.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
129.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
127.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
123.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
119.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
113.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
112.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
112.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
112.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
110.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
109.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
108.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
107.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
105.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
105.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
103.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
102.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
101.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
99.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
98.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
98.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
95.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
91.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
89.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
89.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
88.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
85.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
82.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
81.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
81.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
80.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
79.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
78.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
77.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
77.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
77.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
75.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
72.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
69.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
68.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
67.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
67.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
67.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
66.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
66.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
65.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
64.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
64.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
63.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
62.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
61.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
61.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
60.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
59.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
59.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
59.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
58.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
58.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
57.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
57.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
57.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
56.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
56.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
55.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
54.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
54.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
48.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
48.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
47.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
47.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
46.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
45.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
42.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
40.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
39.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
39.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
38.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
37.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
35.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
35.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
35.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
35.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
35.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
33.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
33.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
33.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
32.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
32.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
32.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
30.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
30.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
29.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
29.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
29.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
29.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
28.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
28.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
26.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
25.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
24.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
24.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
24.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
23.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
23.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
22.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
21.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
21.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
20.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
19.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
19.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
18.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
18.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
18.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
17.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
17.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
13.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
13.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
10.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
10.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
6.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.