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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANXA13 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
271.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
267.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
191.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
128.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
126.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
119.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
105.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
101.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
97.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
88.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
87.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
82.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
81.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
80.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
75.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
70.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
69.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
67.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
67.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
66.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
65.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
62.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
62.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
62.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
61.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
59.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
59.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
59.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
57.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
56.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
56.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
56.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
55.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
53.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
53.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
53.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
52.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
51.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
51.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
50.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
50.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
50.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
49.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
49.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
47.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
47.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
46.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
46.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
46.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
45.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
45.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
44.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
44.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
44.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
43.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
42.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
41.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
41.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
40.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
40.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
39.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
39.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
39.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
38.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
37.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
37.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
37.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
37.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
36.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
36.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
36.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
34.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
33.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
32.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
32.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
32.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
32.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
32.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
31.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
30.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
30.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
29.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
27.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
26.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
26.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
26.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
26.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
26.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
25.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
25.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
25.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
24.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
24.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
23.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
23.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
23.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
22.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
22.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
16.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
13.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
12.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
11.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
8.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
8.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
8.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
7.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
7.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
7.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
6.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
6.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
6.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
6.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
6.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
5.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
5.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
5.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
5.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
4.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
4.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
4.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
4.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
4.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
4.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
4.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
4.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
4.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
3.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
3.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
3.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
3.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
3.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
3.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
3.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
3.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
3.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
3.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
3.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
3.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
3.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
3.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
2.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
2.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
2.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
2.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
2.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
2.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
2.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
2.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
2.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
2.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
2.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
2.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
2.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
2.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
2.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
2.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
2.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
2.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
1.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
1.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
1.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
1.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
1.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
1.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
1.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
1.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
1.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
1.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
1.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
1.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
1.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
1.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
1.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
1.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
0.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
0.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
0.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
0.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
0.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
0.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
0.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
0.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
0.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
0.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
0.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
0.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
0.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
0.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
0.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
0.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
0.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
0.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
0.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
0.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
0.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
0.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
0.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
0.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
0.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
0.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
0.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
0.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
0.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANXA13 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
325.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
125.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
108.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
100.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
96.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
93.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
89.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
78.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
62.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
61.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
61.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
60.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
60.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
59.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
57.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
56.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
53.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
53.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
52.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
49.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
41.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
41.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
38.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
37.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
31.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
30.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
23.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
22.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
17.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
16.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
8.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
8.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
7.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
5.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
4.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
3.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
2.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
2.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
1.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
1.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
1.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
0.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANXA13 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
251.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
180.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
165.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
164.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
149.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
146.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
133.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
130.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
127.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
121.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
121.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
117.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
114.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
113.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
98.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
97.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
95.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
94.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
93.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
90.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
87.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
86.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
83.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
81.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
81.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
78.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
75.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
74.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
73.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
73.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
72.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
71.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
71.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
68.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
68.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
68.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
66.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
65.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
65.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
65.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
65.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
64.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
62.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
61.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
60.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
59.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
57.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
57.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
56.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
55.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
55.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
52.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
52.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
51.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
50.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
50.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
49.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
48.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
47.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
47.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
47.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
46.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
45.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
45.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
45.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
44.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
43.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
42.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
42.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
41.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
41.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
40.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
40.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
39.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
38.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
38.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
35.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
35.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
33.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
33.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
33.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
32.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
32.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
32.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
32.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
31.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
31.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
30.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
30.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
29.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
28.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
27.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
26.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
25.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
21.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
20.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
20.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
17.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
17.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
16.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
15.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
12.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
11.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
4.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
4.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
3.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
3.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
2.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
2.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
2.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
2.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
2.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
2.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
1.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
0.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
0.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
0.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069000003
Tumor
2.1
CPT0019130003
Tumor
2.1
CPT0078800003
Tumor
1.3
CPT0069160003
Tumor
1.3
CPT0081620001
Normal
1.1
CPT0007860003
Tumor
1.1
CPT0013790003
Normal
1.1
CPT0006950001
Normal
1.0
CPT0078670001
Normal
1.0
CPT0077110003
Tumor
0.9
CPT0063630003
Tumor
0.9
CPT0000790001
Normal
0.9
CPT0001350001
Normal
0.9
CPT0078930003
Tumor
0.9
CPT0079410003
Tumor
0.8
CPT0081990003
Tumor
0.8
CPT0010110003
Tumor
0.8
CPT0014130001
Normal
0.8
CPT0078940001
Normal
0.8
CPT0066430001
Normal
0.8
CPT0020130001
Normal
0.7
CPT0088690003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0071150004
Tumor
0.7
CPT0001540009
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0020020001
Normal
0.6
CPT0001550001
Normal
0.6
CPT0001500009
Tumor
0.5
CPT0079430001
Normal
0.5
CPT0078530001
Normal
0.5
CPT0014370004
Tumor
0.5
CPT0089480003
Normal
0.5
CPT0078840001
Normal
0.5
CPT0065810003
Tumor
0.5
CPT0075170001
Normal
0.5
CPT0006900003
Tumor
0.5
CPT0089040001
Normal
0.5
CPT0088900003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0012920003
Normal
0.5
CPT0066470004
Tumor
0.4
CPT0088710001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0006530001
Normal
0.4
CPT0088500001
Normal
0.4
CPT0025580004
Tumor
0.4
CPT0079270003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0086370003
Normal
0.3
CPT0086890003
Normal
0.3
CPT0010170001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0092160003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0065870003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0012770003
Normal
0.2
CPT0012640003
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0019160001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0077500001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0019990003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0000890001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0082010001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0009020003
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0065930003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0079380003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0065820001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0086950003
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0011240003
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0063640001
Normal
-0.5
CPT0087040003
Tumor
-0.5
CPT0063330001
Normal
-0.6
CPT0015910003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0000870016
Tumor
-0.6
CPT0089460004
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0077490003
Tumor
-0.6
CPT0064370003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0000780007
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0021240003
Tumor
-0.6
CPT0002350011
Tumor
-0.7
CPT0025290003
Tumor
-0.7
CPT0079510001
Normal
-0.7
CPT0001230001
Normal
-0.7
CPT0081600003
Tumor
-0.7
CPT0009060003
Tumor
-0.7
CPT0078510003
Tumor
-0.8
CPT0014160003
Tumor
-0.8
CPT0025880003
Tumor
-0.8
CPT0006630003
Tumor
-0.8
CPT0006730001
Normal
-0.9
CPT0001510001
Normal
-1.0
CPT0088780001
Normal
-1.0
CPT0012280003
Tumor
-1.0
CPT0079000001
Normal
-1.1
CPT0065450001
Normal
-1.1
CPT0012550003
Tumor
-1.1
CPT0077320001
Normal
-1.1
CPT0009000003
Tumor
-1.1
CPT0088480003
Tumor
-1.1
CPT0018250001
Normal
-1.1
CPT0026410003
Tumor
-1.1
CPT0065690003
Tumor
-1.2
CPT0025230003
Tumor
-1.2
CPT0084560003
Tumor
-1.2
CPT0081880003
Tumor
-1.2
CPT0023690003
Tumor
-1.2
CPT0086830003
Normal
-1.2
CPT0017410003
Tumor
-1.3
CPT0076330003
Tumor
-1.3
CPT0024680001
Normal
-1.4
CPT0001260009
Tumor
-1.4
CPT0075720003
Tumor
-1.4
CPT0000640003
Tumor
-1.4
CPT0012080003
Tumor
-1.5
CPT0088640003
Normal
-1.6
CPT0026420001
Normal
-1.6
CPT0075130003
Tumor
-1.6
CPT0085670003
Tumor
-1.6
CPT0025060001
Normal
-1.6
CPT0064400001
Normal
-1.6
CPT0088760003
Tumor
-1.6
CPT0015810003
Tumor
-1.7
CPT0078990003
Tumor
-1.7
CPT0023710001
Normal
-1.7
CPT0092290003
Tumor
-1.8
CPT0075560003
Tumor
-1.9
CPT0075570001
Normal
-2.0
CPT0076350001
Normal
-2.0
CPT0088550004
Tumor
-2.0
CPT0017850003
Tumor
-2.1
CPT0025050003
Tumor
-2.1
CPT0079180003
Tumor
-2.2
CPT0024670003
Tumor
-2.2
CPT0078660003
Tumor
-2.2
CPT0001340003
Tumor
-2.4
CPT0088970003
Tumor
-2.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
