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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB2A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
104.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
102.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
94.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
91.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
87.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
81.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
81.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
78.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
76.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
76.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
76.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
72.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
72.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
71.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
70.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
66.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
65.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
64.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
61.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
59.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
58.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
57.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
57.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
55.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
55.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
51.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
51.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
50.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
49.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
46.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
46.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
45.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
45.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
45.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
44.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
44.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
44.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
43.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
43.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
42.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
41.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
41.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
41.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
40.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
38.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
37.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
37.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
35.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
33.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
33.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
33.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
33.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
33.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
32.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
27.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
26.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB2A is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
401.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
177.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
104.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
96.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
96.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
91.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
85.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
84.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
83.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
83.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
82.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
81.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
80.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
80.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
79.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
77.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
76.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
75.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
74.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
72.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
72.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
72.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
71.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
71.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
71.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
71.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
70.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
69.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
68.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
68.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
68.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
68.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
67.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
67.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
66.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
66.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
66.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
66.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
65.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
65.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
65.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
65.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
65.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
65.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
64.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
64.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
64.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
64.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
64.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
64.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
63.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
63.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
63.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
63.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
63.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
63.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
63.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
63.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
62.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
62.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
62.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
62.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
62.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
62.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
62.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
62.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
61.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
61.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
61.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
60.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
60.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
60.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
60.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
60.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
60.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
60.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
60.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
60.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
60.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
60.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
59.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
59.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
59.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
59.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
59.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
59.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
59.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
59.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
58.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
58.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
58.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
58.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
58.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
58.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
58.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
58.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
57.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
57.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
56.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
56.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
56.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
56.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
56.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
56.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
56.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
56.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
55.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
55.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
55.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
55.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
55.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
55.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
55.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
55.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
54.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
54.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
54.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
54.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
54.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
54.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
54.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
54.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
54.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
53.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
53.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
53.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
53.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
53.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
53.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
53.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
53.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
53.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
53.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
52.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
52.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
52.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
52.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
52.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
52.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
52.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
51.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
51.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
51.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
51.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
51.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
51.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
51.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
51.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
51.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
51.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
50.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
50.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
50.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
50.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
50.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
50.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
50.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
50.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
50.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
50.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
50.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
50.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
50.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
50.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
50.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
50.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
50.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
50.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
50.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
50.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
50.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
50.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
50.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
49.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
49.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
49.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
49.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
49.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
49.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
49.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
49.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
49.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
49.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
49.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
48.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
48.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
48.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
48.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
48.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
48.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
48.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
48.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
48.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
48.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
48.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
47.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
47.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
47.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
47.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
47.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
47.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
47.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
47.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
47.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
47.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
47.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
46.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
46.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
46.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
46.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
46.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
46.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
46.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
45.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
45.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
45.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
45.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
45.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
45.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
45.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
45.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
45.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
45.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
45.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
45.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
45.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
45.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
45.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
45.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
45.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
45.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
44.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
44.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
44.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
44.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
44.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
44.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
44.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
44.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
44.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
44.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
44.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
44.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
44.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
44.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
44.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
44.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
44.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
44.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
43.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
43.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
43.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
43.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
43.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
43.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
43.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
43.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
43.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
43.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
43.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
43.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
43.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
43.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
43.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
43.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
43.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
42.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
42.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
42.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
42.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
42.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
42.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
42.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
42.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
42.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
42.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
42.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
42.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
42.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
42.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
42.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
42.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
42.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
42.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
41.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
41.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
41.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
41.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
41.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
41.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
41.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
41.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
41.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
41.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
41.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
41.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
40.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
40.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
40.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
40.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
40.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
40.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
40.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
40.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
40.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
40.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
40.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
39.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
39.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
39.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
39.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
39.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
39.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
39.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
39.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
39.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
39.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
39.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
39.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
38.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
38.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
38.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
38.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
38.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
38.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
38.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
38.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
38.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
38.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
38.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
38.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
37.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
37.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
37.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
37.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
37.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
37.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
37.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
37.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
36.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
36.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
36.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
36.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
36.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
36.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
36.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
36.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
36.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
36.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
36.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
36.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
36.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
35.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
35.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
34.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
34.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
34.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
34.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
34.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
34.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
34.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
34.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
34.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
34.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
34.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
33.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
33.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
33.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
33.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
33.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
33.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
32.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
32.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
32.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
32.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
31.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
31.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
31.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
31.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
31.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
31.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
31.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
31.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
31.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
31.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
30.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
30.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
30.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
30.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
30.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
30.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
30.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
30.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
28.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
27.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
26.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
26.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
26.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
26.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
26.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
26.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
25.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
24.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
23.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
23.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
22.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
22.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
20.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
20.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB2A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
94.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
88.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
87.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
86.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
83.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
83.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
82.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
81.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
81.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
79.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
79.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
78.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
77.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
77.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
76.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
75.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
75.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
74.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
73.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
72.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
71.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
71.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
71.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
70.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
70.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
69.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
69.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
68.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
67.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
67.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
67.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
66.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
66.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
65.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
64.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
64.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
64.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
63.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
63.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
62.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
62.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
62.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
62.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
61.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
61.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
61.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
60.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
60.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
60.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
59.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
59.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
59.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
58.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
58.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
58.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
58.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
57.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
56.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
56.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
56.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
56.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
56.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
55.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
55.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
55.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
55.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
55.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
54.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
53.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
53.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
53.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
53.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
52.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
51.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
51.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
51.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
50.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
49.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
49.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
49.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
49.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
49.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
48.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
47.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
45.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
45.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
44.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
43.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
42.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
37.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
36.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
32.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB2A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
119.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
117.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
117.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
116.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
99.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
97.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
96.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
90.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
90.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
83.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
83.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
80.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
80.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
79.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
77.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
74.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
74.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
72.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
72.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
70.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
69.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
69.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
69.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
68.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
68.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
67.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
66.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
66.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
66.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
66.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
66.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
65.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
65.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
64.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
64.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
64.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
64.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
63.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
63.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
62.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
61.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
61.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
61.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
60.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
60.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
60.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
59.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
59.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
58.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
57.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
57.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
57.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
57.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
57.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
56.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
56.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
56.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
55.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
55.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
54.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
54.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
54.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
53.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
52.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
52.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
52.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
51.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
51.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
51.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
51.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
51.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
50.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
50.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
50.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
50.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
49.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
49.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
48.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
48.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
48.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
48.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
47.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
47.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
47.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
47.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
47.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
46.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
46.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
46.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
45.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
45.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
45.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
45.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
45.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
44.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
44.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
44.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
44.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
44.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
44.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
43.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
43.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
43.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
43.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
43.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
43.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
43.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
43.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
42.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
42.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
42.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
42.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
41.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
41.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
41.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
41.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
41.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
41.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
41.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
41.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
41.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
40.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
40.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
40.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
40.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
40.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
40.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
39.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
39.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
39.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
39.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
38.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
38.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
38.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
38.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
38.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
38.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
38.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
37.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
37.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
37.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
37.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
36.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
36.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
36.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
36.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
35.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
35.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
35.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
35.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
35.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
35.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
35.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
34.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
34.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
34.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
34.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
34.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
33.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
33.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
33.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
33.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
33.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
32.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
32.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
32.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
32.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
32.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
32.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
31.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
31.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
31.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
31.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
30.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
30.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
30.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
29.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
29.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
29.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
29.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
29.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
28.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
28.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
28.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
28.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
27.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
27.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
27.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
27.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
26.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
26.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
26.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
26.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
26.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
26.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
25.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
25.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
24.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
23.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
23.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
22.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
22.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
22.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
20.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
19.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
19.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
18.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
18.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.5
CPT0079180003
Tumor
1.3
CPT0012550003
Tumor
1.1
CPT0023350003
Tumor
1.0
CPT0078660003
Tumor
1.0
CPT0086820003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0084560003
Tumor
0.5
CPT0025880003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0086950003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0014450004
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0088550004
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0006950001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0069160003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0025610001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0012090003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0079380003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0086870003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0081600003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0075720003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0024680001
Normal
-0.4
CPT0014370004
Tumor
-0.5
CPT0009060003
Tumor
-0.6
CPT0017410003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
