We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAPTM4B is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
615.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
599.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
549.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
386.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
316.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
301.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
281.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
273.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
258.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
218.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
206.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
195.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
195.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
161.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
159.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
157.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
155.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
152.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
150.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
149.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
148.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
148.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
142.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
141.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
137.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
134.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
131.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
131.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
127.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
127.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
126.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
124.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
124.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
121.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
117.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
116.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
115.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
113.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
113.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
113.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
103.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
103.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
102.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
101.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
99.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
99.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
99.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
97.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
96.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
95.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
94.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
94.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
93.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
93.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
93.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
93.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
91.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
90.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
89.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
89.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
88.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
87.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
86.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
85.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
84.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
83.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
83.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
82.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
82.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
82.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
82.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
78.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
78.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
77.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
76.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
76.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
75.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
75.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
74.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
74.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
73.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
72.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
72.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
72.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
70.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
70.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
69.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
68.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
67.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
67.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
66.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
66.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
66.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
66.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
65.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
65.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
65.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
65.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
64.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
63.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
63.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
63.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
61.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
61.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
60.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
60.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
59.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
59.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
59.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
58.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
58.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
58.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
58.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
58.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
58.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
57.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
57.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
56.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
56.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
56.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
56.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
55.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
55.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
55.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
54.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
53.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
53.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
53.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
53.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
52.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
52.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
52.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
50.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
48.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
48.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
48.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
48.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
48.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
47.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
47.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
47.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
47.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
47.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
47.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
47.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
46.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
46.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
46.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
46.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
46.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
46.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
45.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
45.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
45.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
45.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
45.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
45.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
45.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
44.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
44.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
44.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
44.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
43.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
43.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
43.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
42.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
42.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
42.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
41.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
39.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
39.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
39.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
39.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
39.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
39.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
38.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
38.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
38.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
38.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
37.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
37.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
37.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
37.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
36.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
36.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
36.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
36.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
35.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
35.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
35.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
35.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
35.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
35.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
35.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
34.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
34.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
34.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
34.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
34.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
33.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
32.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
31.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
31.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
31.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
31.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
31.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
31.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
30.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
30.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
30.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
30.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
29.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
29.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
29.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
29.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
29.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
28.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
28.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
28.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
28.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
28.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
27.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
27.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
27.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
27.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
27.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
27.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
26.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
26.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
26.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
26.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
25.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
25.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
25.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
25.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
24.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
24.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
24.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
24.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
24.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
24.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
24.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
23.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
23.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
23.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
23.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
22.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
22.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
21.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
21.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
21.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
21.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
21.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
20.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
20.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
20.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
20.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
19.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
19.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
19.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
19.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
19.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
19.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
18.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
18.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
18.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
18.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
18.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
17.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
17.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
17.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
17.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
17.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
17.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
17.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
16.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
16.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
16.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
16.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
16.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
15.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
15.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
15.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
15.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
14.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
14.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
14.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
13.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
13.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
13.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
12.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
12.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
11.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
11.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
11.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
11.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
10.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
10.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
5.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
3.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
3.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
3.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
2.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAPTM4B is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.6
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
693.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
310.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
276.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
215.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
215.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
213.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
173.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
172.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
172.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
160.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
145.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
144.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
143.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
137.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
137.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
136.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
134.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
132.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
127.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
126.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
123.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
123.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
123.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
122.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
121.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
120.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
119.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
118.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
114.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
112.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
109.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
104.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
98.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
98.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
97.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
96.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
95.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
94.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
94.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
93.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
93.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
93.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
92.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
92.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
88.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
86.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
85.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
85.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
83.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
83.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
83.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
82.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
82.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
81.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
79.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
79.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
77.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
76.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
75.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
72.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
69.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
69.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
69.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
68.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
68.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
67.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
66.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
66.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
66.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
66.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
65.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
64.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
64.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
61.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
60.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
59.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
59.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
58.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
56.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
56.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
56.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
55.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
55.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
55.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
55.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
55.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
54.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
54.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
54.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
53.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
53.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
52.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
52.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
51.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
50.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
50.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
48.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
48.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
48.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
48.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
47.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
46.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
45.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
45.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
44.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
44.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
44.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
43.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
43.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
43.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
42.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
41.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
41.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
41.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
40.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
40.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
40.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
39.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
39.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
39.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
38.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
37.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
37.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
37.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
36.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
36.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
35.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
35.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
35.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
34.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
33.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
33.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
33.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
32.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
32.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
31.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
30.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
30.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
30.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
30.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
30.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
29.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
29.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
29.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
29.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
29.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
28.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
28.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
28.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
27.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
27.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
26.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
26.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
26.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
25.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
25.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
25.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
25.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
25.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
25.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
25.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
25.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
22.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
21.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
21.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
20.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
20.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
19.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
18.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
18.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
17.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
17.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
17.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
17.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
15.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
14.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
14.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
13.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
13.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
10.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
6.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
4.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
4.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
2.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
2.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
1.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
