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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF40 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
117.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
78.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
77.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
72.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
58.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
58.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
56.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
54.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
53.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
52.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
45.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
44.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
44.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
43.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
42.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
42.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
40.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
40.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
39.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
36.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
36.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
36.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
35.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
34.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
34.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
34.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
33.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
32.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
32.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
30.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
30.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
30.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
30.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
30.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
29.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
29.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
28.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
28.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
28.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
28.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
27.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
24.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
21.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
19.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
17.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF40 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
66.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
63.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
62.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
62.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
61.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
60.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
58.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
55.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
55.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
55.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
54.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
54.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
54.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
53.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
53.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
52.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
52.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
51.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
51.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
50.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
50.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
50.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
50.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
50.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
49.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
49.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
49.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
49.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
49.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
49.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
49.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
47.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
47.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
47.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
46.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
46.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
46.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
46.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
45.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
45.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
45.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
45.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
44.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
44.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
44.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
44.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
44.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
44.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
44.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
44.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
43.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
43.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
43.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
43.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
43.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
43.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
43.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
43.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
43.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
43.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
42.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
42.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
42.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
42.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
42.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
42.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
41.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
41.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
41.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
41.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
41.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
41.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
41.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
41.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
41.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
41.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
41.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
41.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
40.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
40.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
40.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
40.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
40.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
40.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
40.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
40.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
39.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
39.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
39.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
39.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
39.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
39.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
39.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
39.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
39.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
39.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
38.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
38.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
38.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
38.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
38.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
38.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
38.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
38.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
37.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
37.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
37.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
37.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
37.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
37.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
37.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
37.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
37.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
37.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
36.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
36.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
36.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
36.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
36.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
36.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
36.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
36.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
36.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
36.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
36.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
35.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
35.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
35.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
35.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
35.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
35.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
35.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
35.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
35.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
35.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
35.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
35.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
35.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
35.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
35.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
34.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
34.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
34.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
34.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
34.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
34.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
34.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
34.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
34.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
34.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
34.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
34.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
33.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
33.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
33.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
33.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
33.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
33.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
33.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
33.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
33.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
33.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
32.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
32.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
32.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
32.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
32.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
32.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
32.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
32.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
32.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
32.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
32.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
32.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
32.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
31.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
31.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
31.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
31.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
31.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
31.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
31.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
31.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
31.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
31.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
31.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
31.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
31.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
30.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
30.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
30.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
30.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
30.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
30.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
30.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
29.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
29.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
29.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
29.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
29.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
29.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
29.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
28.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
28.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
28.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
28.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
28.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
28.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
28.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
28.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
28.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
28.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
27.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
27.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
27.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
27.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
27.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
26.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
26.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
26.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
26.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
25.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
25.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
25.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
25.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
24.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
24.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
24.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
23.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
23.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
23.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
23.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
22.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
22.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
21.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
20.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
19.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
19.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
17.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
15.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF40 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
67.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
55.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
54.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
53.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
51.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
50.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
49.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
49.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
48.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
48.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
47.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
46.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
45.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
45.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
44.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
43.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
42.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
42.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
41.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
41.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
40.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
40.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
39.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
39.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
39.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
37.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
37.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
36.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
36.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
35.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
35.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
35.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
35.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
35.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
34.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
34.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
32.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
32.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
29.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
29.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
27.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
27.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
25.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
25.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
25.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
17.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF40 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
191.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
133.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
129.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
128.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
123.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
114.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
114.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
113.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
112.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
111.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
111.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
108.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
106.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
104.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
102.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
95.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
91.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
89.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
85.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
85.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
84.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
82.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
81.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
79.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
75.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
75.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
75.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
75.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
74.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
74.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
74.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
72.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
72.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
71.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
71.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
71.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
70.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
70.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
69.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
69.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
69.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
68.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
68.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
68.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
68.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
67.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
66.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
66.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
66.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
65.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
65.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
64.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
64.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
64.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
63.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
63.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
63.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
61.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
61.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
61.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
60.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
60.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
60.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
60.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
60.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
59.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
59.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
59.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
58.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
58.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
58.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
58.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
57.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
57.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
57.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
56.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
56.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
56.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
56.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
56.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
56.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
56.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
55.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
55.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
55.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
55.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
55.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
55.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
54.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
54.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
54.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
54.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
53.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
53.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
53.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
53.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
52.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
52.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
51.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
51.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
50.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
50.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
50.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
50.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
50.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
50.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
49.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
49.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
49.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
49.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
49.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
48.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
48.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
48.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
46.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
46.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
46.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
46.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
46.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
45.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
45.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
45.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
45.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
45.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
45.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
45.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
44.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
44.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
44.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
44.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
44.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
44.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
43.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
43.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
43.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
43.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
43.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
42.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
42.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
42.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
42.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
41.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
41.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
41.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
41.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
40.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
40.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
40.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
40.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
40.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
40.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
40.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
39.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
39.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
39.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
39.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
39.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
38.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
38.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
38.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
38.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
37.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
36.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
36.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
36.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
35.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
35.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
35.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
35.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
35.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
35.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
35.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
34.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
34.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
34.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
34.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
34.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
34.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
33.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
33.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
33.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
32.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
32.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
31.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
31.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
30.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
30.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
29.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
29.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
28.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
28.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
26.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
26.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
26.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
25.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
24.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
20.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
20.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
19.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
16.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
16.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069160003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0012180003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0001270001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0014370004
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0075170001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0012370003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0014130001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0009000003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0009080003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0026420001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0000790001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0024670003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0078660003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
