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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSPT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
120.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
119.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
108.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
96.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
86.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
77.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
75.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
73.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
72.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
72.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
70.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
70.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
66.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
66.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
65.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
63.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
63.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
63.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
62.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
62.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
59.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
59.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
58.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
58.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
55.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
53.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
50.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
50.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
46.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
46.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
45.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
44.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
42.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
39.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
38.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
36.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
35.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
34.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
32.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
31.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
31.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
30.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
30.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
30.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
30.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
29.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
28.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
28.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
25.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
24.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
21.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
18.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSPT1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
109.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
103.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
97.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
97.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
96.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
94.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
90.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
89.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
88.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
85.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
82.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
80.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
80.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
76.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
76.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
75.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
75.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
74.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
73.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
71.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
71.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
70.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
70.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
70.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
69.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
68.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
67.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
67.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
66.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
66.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
66.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
66.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
65.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
65.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
65.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
64.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
64.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
64.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
64.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
64.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
64.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
64.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
64.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
63.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
63.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
63.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
62.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
62.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
62.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
62.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
62.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
62.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
61.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
60.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
60.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
60.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
60.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
60.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
60.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
59.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
59.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
59.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
59.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
59.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
59.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
58.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
58.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
58.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
58.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
58.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
58.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
58.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
58.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
57.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
57.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
57.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
57.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
57.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
57.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
57.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
57.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
57.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
57.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
56.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
56.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
56.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
56.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
56.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
56.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
56.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
56.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
56.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
56.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
55.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
55.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
55.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
55.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
55.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
55.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
55.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
55.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
55.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
54.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
54.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
54.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
54.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
54.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
54.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
53.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
53.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
53.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
53.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
52.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
52.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
52.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
52.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
52.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
52.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
51.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
51.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
51.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
51.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
51.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
51.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
51.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
51.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
51.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
50.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
50.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
50.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
50.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
50.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
50.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
50.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
50.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
50.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
49.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
49.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
49.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
49.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
49.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
48.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
48.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
48.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
48.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
48.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
48.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
48.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
47.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
47.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
47.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
47.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
47.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
47.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
47.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
47.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
47.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
47.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
47.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
47.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
47.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
46.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
46.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
46.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
46.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
46.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
46.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
46.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
46.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
45.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
45.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
45.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
45.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
45.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
45.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
45.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
45.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
45.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
45.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
45.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
44.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
44.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
44.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
44.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
44.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
44.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
44.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
44.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
44.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
44.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
44.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
44.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
43.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
43.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
43.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
43.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
43.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
43.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
43.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
43.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
43.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
43.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
43.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
43.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
43.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
43.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
42.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
42.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
42.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
42.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
42.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
42.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
42.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
42.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
42.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
42.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
42.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
42.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
41.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
41.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
41.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
41.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
41.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
40.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
40.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
40.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
40.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
40.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
40.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
40.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
40.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
40.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
40.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
40.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
39.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
39.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
39.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
39.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
39.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
39.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
39.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
39.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
39.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
39.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
38.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
38.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
38.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
38.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
38.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
38.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
38.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
37.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
37.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
37.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
37.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
37.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
37.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
37.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
37.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
37.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
36.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
36.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
36.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
36.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
35.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
35.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
35.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
35.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
34.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
34.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
34.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
34.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
34.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
34.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
34.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
34.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
34.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
33.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
33.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
33.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
33.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
33.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
32.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
32.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
32.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
31.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
31.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
31.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
31.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
31.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
31.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
31.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
31.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
30.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
30.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
30.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
30.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
30.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
30.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
30.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
30.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
29.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
28.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
28.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
28.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
28.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
28.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
28.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
28.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
27.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
27.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
26.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
26.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
26.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
26.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
26.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
26.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
24.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
24.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
24.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
24.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
22.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
21.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
21.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
21.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
20.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
18.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
15.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSPT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
82.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
82.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
82.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
80.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
78.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
78.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
77.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
74.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
70.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
70.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
70.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
69.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
68.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
67.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
66.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
64.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
64.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
63.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
62.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
62.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
61.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
60.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
60.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
60.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
59.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
59.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
57.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
56.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
55.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
55.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
55.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
55.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
54.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
54.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
53.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
53.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
51.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
51.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
50.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
50.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
50.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
49.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
49.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
49.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
49.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
48.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
48.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
48.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
48.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
47.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
46.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
46.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
45.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
45.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
45.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
44.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
43.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
43.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
41.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
40.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
40.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
39.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
37.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
36.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
34.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
34.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
33.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
33.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
32.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
31.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
31.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
30.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
29.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
29.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GSPT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
140.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
120.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
117.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
105.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
98.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
96.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
96.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
95.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
95.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
90.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
89.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
88.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
83.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
82.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
82.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
80.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
80.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
79.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
78.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
76.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
75.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
73.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
73.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
72.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
71.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
71.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
70.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
70.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
69.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
69.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
68.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
68.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
68.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
67.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
67.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
66.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
65.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
64.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
64.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
62.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
62.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
62.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
61.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
61.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
61.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
61.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
60.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
59.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
59.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
58.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
58.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
57.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
57.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
56.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
56.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
56.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
56.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
56.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
56.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
55.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
55.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
55.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
55.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
55.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
54.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
54.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
53.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
53.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
53.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
52.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
52.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
52.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
52.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
51.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
51.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
51.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
51.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
51.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
50.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
50.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
50.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
49.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
49.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
49.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
49.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
49.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
48.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
48.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
47.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
47.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
47.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
47.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
46.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
46.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
46.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
45.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
45.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
45.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
45.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
45.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
45.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
44.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
44.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
44.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
44.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
44.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
43.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
43.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
43.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
43.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
42.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
41.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
41.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
41.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
41.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
41.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
40.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
40.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
40.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
40.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
40.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
40.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
39.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
39.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
39.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
39.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
39.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
38.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
37.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
37.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
37.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
36.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
36.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
36.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
36.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
36.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
35.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
35.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
35.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
34.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
34.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
34.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
34.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
34.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
34.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
34.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
34.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
34.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
33.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
33.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
33.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
33.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
33.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
33.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
32.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
32.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
31.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
31.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
30.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
30.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
30.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
30.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
28.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
28.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
27.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
26.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
25.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
24.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
24.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
23.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
23.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
23.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
22.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
18.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
1.0
CPT0079180003
Tumor
0.9
CPT0078660003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0002270011
Tumor
0.6
CPT0088550004
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0086820003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0001180009
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0014450004
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0075130003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0084590001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0018250001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0063330001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0082010001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0007870001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0001550001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0079480003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0066470004
Tumor
-0.3
CPT0065690003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
