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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP10 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
54.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
53.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
50.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
49.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
47.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
46.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
43.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
42.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
42.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
42.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
40.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
39.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
38.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
37.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
36.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
35.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
33.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
33.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
31.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
31.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
29.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
29.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
29.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
26.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
26.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
24.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
24.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
24.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
20.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
19.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP10 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
83.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
59.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
58.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
50.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
48.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
47.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
47.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
47.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
47.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
46.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
45.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
45.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
45.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
45.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
45.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
44.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
44.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
44.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
44.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
43.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
43.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
43.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
43.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
43.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
43.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
43.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
43.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
42.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
42.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
42.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
42.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
41.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
41.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
41.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
41.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
41.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
41.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
40.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
40.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
40.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
40.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
40.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
40.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
40.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
40.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
40.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
39.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
39.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
39.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
39.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
39.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
39.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
38.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
38.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
38.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
38.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
38.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
38.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
38.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
38.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
38.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
38.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
38.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
38.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
37.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
37.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
37.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
37.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
37.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
37.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
37.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
36.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
36.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
36.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
36.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
36.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
36.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
36.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
36.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
36.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
36.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
36.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
36.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
36.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
35.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
35.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
35.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
35.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
35.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
35.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
35.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
35.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
35.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
35.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
35.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
35.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
35.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
35.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
34.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
34.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
34.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
34.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
34.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
34.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
34.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
34.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
34.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
34.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
34.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
34.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
33.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
33.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
33.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
33.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
33.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
33.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
33.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
33.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
33.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
33.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
32.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
32.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
32.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
32.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
32.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
32.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
32.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
32.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
32.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
32.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
32.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
32.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
32.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
31.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
31.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
31.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
31.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
31.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
31.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
31.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
31.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
31.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
31.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
31.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
31.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
31.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
30.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
30.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
30.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
30.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
30.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
30.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
29.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
29.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
29.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
29.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
29.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
29.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
29.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
29.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
29.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
28.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
28.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
28.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
28.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
28.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
28.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
28.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
28.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
28.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
28.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
27.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
27.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
27.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
27.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
27.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
27.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
27.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
27.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
27.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
27.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
27.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
27.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
27.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
26.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
26.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
26.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
26.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
25.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
25.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
25.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
24.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
24.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
24.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
24.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
24.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
24.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
24.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
23.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
23.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
22.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
22.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
22.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
21.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
21.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
20.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
20.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
16.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
15.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP10 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
60.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
60.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
57.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
51.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
50.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
49.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
47.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
46.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
45.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
44.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
44.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
44.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
44.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
44.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
43.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
43.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
42.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
42.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
42.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
42.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
41.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
40.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
40.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
39.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
38.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
37.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
37.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
37.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
35.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
35.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
34.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
34.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
33.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
33.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
32.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
31.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
30.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
30.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
29.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
29.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
28.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
28.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
28.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
26.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
26.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
26.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
24.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
24.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
21.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
20.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP10 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
166.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
88.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
84.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
77.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
68.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
62.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
59.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
57.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
57.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
56.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
54.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
53.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
53.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
53.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
53.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
52.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
52.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
51.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
51.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
50.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
50.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
50.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
50.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
50.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
49.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
49.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
47.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
47.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
45.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
44.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
44.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
44.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
44.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
44.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
44.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
43.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
43.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
43.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
43.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
43.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
42.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
42.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
42.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
42.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
42.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
41.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
41.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
41.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
40.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
40.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
40.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
40.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
40.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
40.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
40.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
39.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
39.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
39.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
39.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
39.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
38.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
38.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
37.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
37.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
37.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
37.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
37.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
37.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
37.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
37.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
37.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
37.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
37.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
36.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
36.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
36.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
35.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
35.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
35.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
35.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
34.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
34.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
33.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
33.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
33.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
33.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
33.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
32.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
32.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
32.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
31.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
31.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
31.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
30.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
30.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
30.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
29.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
29.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
29.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
29.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
28.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
28.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
27.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
26.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
26.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
26.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
26.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
25.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
25.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
25.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
25.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
25.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
24.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
23.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
21.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
20.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
19.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
18.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
17.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
16.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
9.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
4.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
2.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.0
CPT0078800003
Tumor
1.0
CPT0079180003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0078660003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0012550003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0086820003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0065450001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0066430001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0079000001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0018250001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0019130003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0006530001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0001510001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0010160003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0092290003
Tumor
-0.4
CPT0088900003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
