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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMS is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
261.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
174.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
153.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
126.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
123.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
112.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
111.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
108.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
96.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
94.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
91.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
91.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
90.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
88.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
87.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
86.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
81.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
80.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
79.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
76.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
74.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
71.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
70.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
69.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
66.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
62.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
62.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
62.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
62.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
59.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
59.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
58.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
57.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
56.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
54.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
51.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
51.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
51.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
51.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
50.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
50.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
47.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
46.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
46.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
45.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
45.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
45.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
42.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
42.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
40.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
39.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
39.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
38.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
36.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
34.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
29.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
28.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
27.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
20.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMS is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
82.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
800.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
259.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
258.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
244.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
241.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
236.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
231.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
231.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
228.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
218.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
208.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
199.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
195.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
183.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
165.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
163.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
162.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
162.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
159.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
155.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
148.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
148.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
147.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
147.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
142.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
141.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
141.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
139.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
138.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
137.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
133.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
132.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
131.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
127.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
126.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
123.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
123.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
123.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
121.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
121.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
120.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
119.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
117.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
117.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
116.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
116.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
115.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
114.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
113.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
113.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
113.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
112.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
112.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
112.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
112.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
111.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
110.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
110.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
110.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
109.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
109.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
109.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
109.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
109.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
109.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
107.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
107.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
106.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
106.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
106.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
106.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
106.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
105.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
104.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
104.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
103.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
103.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
103.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
102.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
102.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
101.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
100.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
100.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
100.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
100.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
100.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
99.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
99.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
99.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
98.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
98.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
98.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
98.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
97.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
97.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
97.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
97.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
96.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
96.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
96.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
96.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
96.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
96.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
95.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
95.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
95.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
95.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
95.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
95.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
95.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
95.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
94.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
94.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
93.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
93.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
93.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
93.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
93.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
92.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
92.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
92.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
92.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
91.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
91.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
91.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
91.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
91.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
91.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
91.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
91.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
90.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
90.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
90.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
90.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
90.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
89.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
89.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
89.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
89.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
89.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
89.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
89.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
89.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
89.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
89.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
89.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
89.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
89.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
88.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
88.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
88.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
88.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
88.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
88.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
87.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
87.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
87.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
87.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
87.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
87.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
87.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
87.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
86.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
86.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
86.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
86.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
86.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
86.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
86.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
85.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
85.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
85.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
85.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
85.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
85.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
85.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
84.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
84.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
84.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
84.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
84.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
84.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
83.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
83.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
83.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
83.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
83.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
83.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
83.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
83.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
83.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
83.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
83.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
83.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
83.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
83.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
83.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
82.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
82.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
82.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
82.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
82.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
82.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
82.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
82.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
81.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
81.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
81.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
81.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
81.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
81.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
81.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
81.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
81.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
81.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
80.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
80.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
80.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
80.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
80.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
80.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
80.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
80.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
80.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
80.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
79.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
79.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
79.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
79.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
79.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
79.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
79.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
79.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
79.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
78.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
78.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
78.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
78.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
78.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
78.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
78.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
78.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
78.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
78.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
77.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
77.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
77.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
77.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
77.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
77.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
77.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
76.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
76.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
76.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
76.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
76.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
76.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
76.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
76.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
76.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
76.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
75.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
75.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
75.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
75.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
75.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
75.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
75.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
75.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
75.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
74.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
74.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
74.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
74.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
74.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
74.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
74.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
74.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
74.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
74.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
74.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
73.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
73.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
73.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
73.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
73.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
73.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
73.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
72.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
72.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
72.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
72.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
72.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
72.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
72.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
72.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
72.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
72.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
71.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
71.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
71.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
71.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
71.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
71.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
71.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
71.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
71.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
70.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
70.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
70.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
70.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
70.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
70.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
70.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
70.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
70.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
69.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
69.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
69.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
69.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
69.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
69.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
69.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
69.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
69.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
69.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
68.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
68.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
68.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
68.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
68.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
68.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
68.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
68.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
68.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
67.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
67.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
67.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
67.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
67.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
67.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
67.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
67.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
67.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
66.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
66.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
66.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
66.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
66.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
66.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
66.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
66.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
66.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
66.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
66.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
66.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
65.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
65.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
65.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
65.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
65.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
65.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
65.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
64.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
64.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
64.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
64.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
64.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
64.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
64.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
63.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
63.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
63.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
63.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
63.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
62.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
62.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
62.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
62.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
62.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
61.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
61.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
61.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
61.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
61.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
61.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
61.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
61.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
61.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
61.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
61.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
60.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
60.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
60.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
60.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
60.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
60.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
59.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
59.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
59.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
59.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
59.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
58.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
58.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
58.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
58.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
58.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
58.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
58.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
58.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
57.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
57.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
57.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
57.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
57.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
57.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
56.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
56.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
56.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
56.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
56.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
55.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
55.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
55.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
55.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
55.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
55.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
55.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
54.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
54.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
54.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
54.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
53.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
53.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
53.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
53.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
53.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
53.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
52.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
52.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
52.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
52.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
52.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
52.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
51.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
51.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
51.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
51.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
51.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
51.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
51.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
51.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
50.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
49.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
49.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
49.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
49.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
49.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
49.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
49.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
48.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
48.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
48.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
48.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
48.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
48.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
47.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
47.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
47.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
47.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
47.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
46.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
46.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
46.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
46.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
46.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
46.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
46.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
45.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
45.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
45.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
45.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
45.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
45.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
45.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
44.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
44.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
43.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
43.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
43.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
43.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
43.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
42.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
42.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
41.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
40.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
39.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
39.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
39.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
38.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
38.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
37.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
37.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
37.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
36.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
36.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
36.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
35.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
35.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
34.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
30.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
29.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
28.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
27.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
26.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
25.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMS is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
327.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
215.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
179.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
147.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
141.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
135.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
134.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
128.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
126.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
124.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
123.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
123.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
115.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
112.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
111.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
108.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
107.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
104.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
104.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
103.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
102.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
102.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
101.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
100.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
99.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
97.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
97.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
97.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
97.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
95.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
95.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
95.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
94.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
93.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
92.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
92.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
92.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
92.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
91.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
91.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
90.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
90.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
89.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
88.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
87.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
87.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
86.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
86.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
86.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
86.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
85.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
85.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
84.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
84.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
83.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
82.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
82.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
82.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
82.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
82.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
81.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
81.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
80.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
80.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
80.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
78.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
77.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
76.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
76.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
73.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
73.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
73.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
71.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
71.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
69.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
69.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
68.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
68.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
68.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
68.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
68.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
66.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
66.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
66.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
64.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
64.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
63.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
63.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
63.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
61.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
60.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
56.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
54.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
52.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
47.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
47.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
43.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
30.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMS is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
83.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
469.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
450.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
316.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
292.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
283.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
276.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
274.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
267.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
258.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
246.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
241.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
235.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
235.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
207.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
204.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
202.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
193.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
186.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
186.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
186.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
177.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
165.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
164.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
161.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
158.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
158.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
157.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
155.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
146.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
145.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
145.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
142.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
142.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
129.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
128.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
128.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
127.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
127.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
125.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
125.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
125.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
121.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
121.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
121.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
119.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
119.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
118.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
117.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
116.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
115.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
112.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
111.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
111.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
109.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
109.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
108.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
106.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
106.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
106.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
105.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
105.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
103.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
103.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
103.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
102.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
102.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
101.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
101.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
100.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
100.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
98.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
98.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
98.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
97.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
97.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
97.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
95.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
95.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
95.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
95.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
94.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
94.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
93.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
93.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
93.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
93.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
92.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
92.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
92.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
92.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
92.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
92.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
92.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
91.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
90.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
89.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
89.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
89.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
89.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
88.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
88.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
88.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
87.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
87.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
86.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
86.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
86.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
83.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
83.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
83.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
82.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
81.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
80.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
79.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
79.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
79.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
78.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
78.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
78.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
77.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
77.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
77.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
75.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
75.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
74.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
74.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
74.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
73.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
73.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
73.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
72.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
72.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
72.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
72.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
71.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
71.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
70.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
69.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
68.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
67.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
67.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
67.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
66.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
66.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
66.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
66.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
65.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
65.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
64.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
64.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
64.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
64.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
64.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
63.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
63.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
63.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
63.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
63.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
62.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
62.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
61.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
61.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
61.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
61.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
61.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
60.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
60.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
60.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
59.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
58.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
58.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
58.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
58.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
57.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
57.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
57.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
57.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
57.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
57.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
57.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
56.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
56.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
56.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
56.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
56.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
55.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
55.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
55.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
54.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
53.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
53.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
53.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
53.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
52.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
52.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
52.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
51.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
50.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
50.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
50.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
50.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
50.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
50.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
50.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
49.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
48.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
48.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
47.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
47.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
47.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
46.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
46.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
46.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
46.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
46.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
45.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
45.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
45.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
44.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
43.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
43.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
42.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
41.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
41.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
41.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
38.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
37.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
37.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
37.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
37.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
36.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
35.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
35.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
35.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
34.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
34.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
34.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
33.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
32.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
29.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
28.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
27.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
25.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
24.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
23.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
23.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
22.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
20.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
17.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
1.7
CPT0089480003
Normal
0.6
CPT0019130003
Tumor
0.5
CPT0088780001
Normal
0.5
CPT0012900004
Tumor
0.5
CPT0078670001
Normal
0.5
CPT0079180003
Tumor
0.5
CPT0001230001
Normal
0.5
CPT0002270011
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0012640003
Normal
0.5
CPT0012570003
Normal
0.4
CPT0012770003
Normal
0.4
CPT0092310003
Normal
0.4
CPT0025920001
Normal
0.4
CPT0088550004
Tumor
0.4
CPT0012920003
Normal
0.4
CPT0007870001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0086970003
Normal
0.4
CPT0020020001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0069000003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0012370003
Tumor
0.3
CPT0078940001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0001550001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0014450004
Tumor
0.3
CPT0063640001
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0023710001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0079480003
Tumor
0.3
CPT0025610001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0019160001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0026420001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0081620001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0069160003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0086890003
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0012290003
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0079230003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0012670003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0092790003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0084590001
Normal
-0.4
CPT0081600003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0066480003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0025290003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0078800003
Tumor
-0.5
CPT0015910003
Tumor
-0.6
CPT0020120003
Tumor
-0.6
CPT0086870003
Tumor
-0.7
CPT0088630003
Tumor
-0.7
CPT0015730003
Tumor
-0.7
CPT0001180009
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
