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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAGT1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
102.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
83.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
63.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
60.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
59.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
58.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
58.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
56.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
55.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
52.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
52.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
51.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
51.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
51.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
51.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
50.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
49.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
48.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
46.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
45.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
45.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
44.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
43.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
42.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
40.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
40.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
40.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
38.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
38.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
38.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
36.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
35.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
33.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
30.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
30.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
29.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
26.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
26.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
23.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
21.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
21.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
20.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
17.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
16.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAGT1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
181.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
117.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
99.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
97.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
89.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
87.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
86.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
82.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
81.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
76.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
75.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
74.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
73.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
73.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
69.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
69.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
68.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
67.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
67.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
66.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
66.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
66.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
65.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
65.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
64.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
63.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
63.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
63.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
63.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
63.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
63.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
62.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
62.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
62.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
62.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
62.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
62.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
61.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
61.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
61.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
61.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
60.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
60.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
60.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
60.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
60.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
60.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
59.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
59.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
58.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
58.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
57.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
57.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
56.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
56.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
56.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
56.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
56.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
56.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
55.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
55.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
55.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
55.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
55.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
55.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
55.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
54.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
54.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
54.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
54.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
54.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
54.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
54.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
53.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
53.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
53.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
53.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
53.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
53.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
53.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
53.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
53.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
53.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
53.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
53.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
53.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
53.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
52.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
52.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
52.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
52.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
51.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
51.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
51.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
51.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
51.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
51.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
51.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
50.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
50.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
50.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
50.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
50.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
50.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
49.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
49.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
49.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
49.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
49.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
49.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
49.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
48.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
48.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
48.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
48.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
48.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
48.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
48.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
48.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
47.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
47.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
47.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
47.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
47.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
47.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
47.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
47.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
47.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
47.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
46.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
46.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
46.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
46.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
46.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
46.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
46.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
46.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
46.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
46.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
46.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
45.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
45.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
45.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
45.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
45.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
45.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
45.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
45.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
45.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
44.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
44.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
44.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
44.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
44.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
44.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
44.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
44.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
44.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
44.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
44.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
43.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
43.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
43.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
43.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
43.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
43.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
43.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
43.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
42.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
42.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
42.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
42.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
42.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
42.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
42.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
42.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
42.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
42.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
42.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
42.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
42.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
41.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
41.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
41.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
41.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
41.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
41.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
41.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
41.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
41.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
40.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
40.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
40.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
40.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
40.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
40.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
40.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
40.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
40.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
40.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
40.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
40.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
40.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
40.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
40.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
39.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
39.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
39.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
39.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
39.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
39.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
39.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
39.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
39.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
39.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
39.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
38.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
38.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
38.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
38.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
38.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
38.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
38.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
38.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
38.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
38.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
38.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
38.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
37.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
37.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
37.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
37.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
37.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
37.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
37.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
37.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
37.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
37.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
37.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
37.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
37.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
37.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
36.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
36.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
36.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
36.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
36.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
36.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
35.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
35.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
35.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
35.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
35.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
35.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
35.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
34.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
34.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
34.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
34.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
34.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
34.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
34.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
34.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
34.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
33.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
33.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
33.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
33.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
33.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
33.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
33.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
33.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
33.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
33.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
33.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
32.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
32.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
32.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
32.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
32.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
32.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
32.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
32.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
31.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
31.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
31.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
31.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
31.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
31.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
30.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
30.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
30.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
30.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
30.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
30.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
30.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
29.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
29.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
29.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
29.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
29.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
29.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
29.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
29.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
29.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
29.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
28.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
28.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
27.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
27.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
27.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
27.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
27.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
26.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
26.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
26.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
25.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
25.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
24.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
24.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
24.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
22.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
22.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
21.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
19.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
19.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
16.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAGT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
87.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
82.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
77.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
75.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
73.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
71.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
70.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
70.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
66.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
66.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
65.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
65.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
64.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
62.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
62.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
60.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
60.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
57.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
57.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
56.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
56.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
55.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
54.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
54.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
53.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
53.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
52.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
52.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
52.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
51.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
50.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
50.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
50.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
50.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
50.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
49.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
48.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
47.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
47.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
47.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
46.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
45.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
45.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
45.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
45.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
44.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
43.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
43.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
43.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
42.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
42.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
42.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
42.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
41.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
41.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
39.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
38.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
38.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
37.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
37.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
35.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
33.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
32.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
30.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
30.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
30.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
29.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
29.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
26.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
25.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAGT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
98.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
86.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
82.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
80.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
75.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
73.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
71.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
71.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
66.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
66.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
65.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
63.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
63.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
62.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
62.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
61.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
60.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
60.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
59.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
59.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
58.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
57.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
55.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
55.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
54.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
53.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
53.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
53.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
50.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
50.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
50.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
50.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
49.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
49.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
49.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
48.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
48.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
47.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
46.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
46.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
45.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
44.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
44.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
43.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
43.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
43.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
43.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
43.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
42.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
42.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
42.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
42.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
42.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
41.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
41.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
40.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
40.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
39.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
39.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
39.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
39.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
39.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
39.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
39.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
39.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
39.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
39.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
39.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
38.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
38.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
38.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
37.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
37.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
37.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
36.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
36.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
36.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
36.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
36.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
36.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
35.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
35.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
35.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
35.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
35.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
34.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
34.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
34.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
34.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
34.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
33.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
33.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
32.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
32.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
32.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
31.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
31.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
31.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
31.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
29.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
29.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
29.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
29.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
28.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
27.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
26.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
26.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
26.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
26.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
25.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
25.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
24.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
24.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
23.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
23.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
23.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
23.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
21.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
20.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
19.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
19.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
18.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
18.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
17.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.6
CPT0023350003
Tumor
1.1
CPT0002350011
Tumor
1.0
CPT0001340003
Tumor
0.9
CPT0011410003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0088690003
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0081880003
Tumor
0.5
CPT0014160003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0092800003
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0088920001
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0023360001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0006730001
Normal
0.3
CPT0063630003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0088780001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0079380003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0084590001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0078990003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0012290003
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0063330001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0071150004
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0077110003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0007860003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0012080003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0010160003
Tumor
-0.3
CPT0014470001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0075170001
Normal
-0.4
CPT0017850003
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0012640003
Normal
-0.4
CPT0001540009
Tumor
-0.4
CPT0077490003
Tumor
-0.5
CPT0076350001
Normal
-0.5
CPT0026410003
Tumor
-0.5
CPT0017450001
Normal
-0.5
CPT0081990003
Tumor
-0.6
CPT0012570003
Normal
-0.6
CPT0000780007
Tumor
-0.6
CPT0012770003
Normal
-0.7
CPT0079180003
Tumor
-0.8
CPT0006900003
Tumor
-0.8
CPT0024680001
Normal
-0.8
CPT0009020003
Normal
-0.9
CPT0009060003
Tumor
-0.9
CPT0012900004
Tumor
-1.2
CPT0012920003
Normal
-1.2
CPT0009080003
Normal
-1.3
CPT0011240003
Tumor
-1.5
CPT0017410003
Tumor
-2.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.