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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PQBP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
87.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
77.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
77.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
71.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
69.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
63.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
63.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
57.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
51.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
49.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
47.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
47.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
46.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
42.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
41.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
40.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
40.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
39.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
39.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
38.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
36.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
36.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
36.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
36.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
35.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
34.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
33.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
32.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
32.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
31.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
29.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
27.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
26.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
25.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
24.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
23.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
23.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
22.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
21.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
21.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
21.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
20.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
20.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
19.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
18.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PQBP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
269.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
139.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
103.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
101.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
98.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
94.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
91.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
87.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
81.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
79.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
77.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
77.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
76.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
76.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
75.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
74.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
74.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
73.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
73.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
72.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
72.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
71.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
71.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
71.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
71.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
70.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
70.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
69.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
68.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
68.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
67.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
67.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
67.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
67.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
67.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
67.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
67.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
66.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
66.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
66.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
66.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
65.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
65.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
65.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
64.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
64.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
64.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
64.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
63.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
63.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
63.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
63.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
63.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
62.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
61.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
61.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
61.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
61.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
61.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
60.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
60.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
60.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
60.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
60.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
60.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
60.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
59.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
59.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
59.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
59.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
58.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
58.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
58.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
58.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
58.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
58.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
57.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
57.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
57.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
57.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
56.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
56.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
56.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
56.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
56.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
56.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
56.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
55.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
55.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
55.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
55.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
55.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
55.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
55.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
55.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
55.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
55.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
55.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
55.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
55.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
54.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
54.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
54.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
54.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
54.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
54.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
54.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
54.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
54.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
53.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
53.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
53.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
53.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
53.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
53.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
53.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
53.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
53.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
53.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
53.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
53.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
52.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
52.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
52.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
52.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
52.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
52.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
52.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
52.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
52.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
52.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
52.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
52.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
52.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
51.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
51.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
51.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
51.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
51.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
51.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
51.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
51.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
51.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
51.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
51.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
51.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
50.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
50.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
50.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
50.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
50.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
50.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
50.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
50.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
50.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
50.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
50.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
50.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
50.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
50.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
50.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
50.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
50.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
49.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
49.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
49.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
49.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
49.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
49.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
49.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
49.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
49.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
49.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
49.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
49.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
49.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
48.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
48.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
48.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
48.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
48.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
48.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
48.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
48.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
48.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
48.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
48.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
48.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
48.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
48.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
47.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
47.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
47.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
47.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
47.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
47.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
47.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
47.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
47.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
47.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
46.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
46.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
46.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
46.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
46.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
46.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
46.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
46.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
46.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
46.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
46.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
46.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
46.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
46.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
46.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
46.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
46.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
46.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
45.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
45.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
45.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
45.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
45.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
45.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
45.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
45.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
45.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
45.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
45.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
45.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
45.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
45.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
45.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
45.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
45.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
44.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
44.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
44.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
44.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
44.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
44.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
44.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
44.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
44.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
44.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
44.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
44.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
44.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
43.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
43.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
43.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
43.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
43.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
43.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
43.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
43.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
43.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
43.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
43.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
43.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
43.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
43.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
43.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
43.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
43.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
43.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
43.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
43.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
42.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
42.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
42.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
42.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
42.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
42.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
42.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
42.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
42.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
42.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
42.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
42.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
42.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
42.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
42.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
41.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
41.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
41.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
41.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
41.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
41.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
41.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
41.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
41.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
41.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
41.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
41.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
41.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
41.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
40.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
40.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
40.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
40.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
40.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
40.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
40.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
40.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
40.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
40.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
40.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
40.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
40.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
40.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
40.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
39.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
39.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
39.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
39.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
39.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
39.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
39.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
39.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
39.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
39.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
39.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
39.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
39.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
38.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
38.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
38.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
38.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
38.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
38.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
38.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
38.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
37.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
37.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
37.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
37.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
37.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
37.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
37.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
37.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
37.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
37.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
37.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
36.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
36.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
36.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
36.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
36.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
36.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
36.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
36.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
36.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
36.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
35.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
35.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
35.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
35.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
35.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
35.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
34.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
34.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
34.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
34.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
34.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
34.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
33.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
33.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
33.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
33.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
33.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
33.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
33.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
33.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
32.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
32.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
32.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
32.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
32.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
32.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
31.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
31.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
31.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
31.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
31.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
31.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
31.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
31.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
30.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
30.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
30.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
30.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
30.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
30.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
30.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
29.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
29.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
28.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
26.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
26.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
23.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
23.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
22.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
22.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
21.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
5.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PQBP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
63.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
60.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
59.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
56.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
56.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
54.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
51.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
51.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
50.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
47.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
46.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
45.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
45.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
45.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
45.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
44.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
43.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
42.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
42.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
42.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
41.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
39.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
39.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
39.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
38.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
37.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
37.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
37.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
36.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
36.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
36.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
35.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
35.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
35.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
34.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
34.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
34.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
34.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
33.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
33.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
33.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
33.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
32.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
32.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
30.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
27.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
27.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
27.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
24.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PQBP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
132.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
107.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
95.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
94.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
92.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
90.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
83.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
83.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
81.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
79.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
79.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
77.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
76.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
76.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
73.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
71.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
71.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
70.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
70.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
70.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
68.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
68.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
67.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
66.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
66.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
64.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
64.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
63.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
63.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
62.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
62.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
61.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
61.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
61.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
59.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
59.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
58.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
58.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
57.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
57.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
57.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
56.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
56.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
56.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
56.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
55.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
55.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
54.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
54.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
54.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
53.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
53.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
53.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
53.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
52.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
52.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
51.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
51.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
51.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
51.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
51.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
50.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
50.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
50.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
49.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
49.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
49.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
49.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
48.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
48.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
48.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
48.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
47.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
47.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
47.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
47.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
47.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
47.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
46.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
46.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
46.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
46.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
46.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
46.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
45.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
45.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
45.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
45.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
45.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
45.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
44.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
44.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
44.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
44.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
44.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
43.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
43.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
43.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
42.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
42.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
42.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
42.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
42.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
42.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
42.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
41.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
41.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
41.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
41.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
41.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
40.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
40.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
40.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
40.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
40.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
40.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
40.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
40.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
40.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
40.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
40.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
39.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
39.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
39.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
39.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
39.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
39.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
39.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
39.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
39.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
39.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
39.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
39.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
39.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
38.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
38.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
38.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
37.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
37.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
37.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
37.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
37.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
37.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
36.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
36.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
36.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
36.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
36.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
36.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
36.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
35.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
34.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
34.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
34.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
34.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
34.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
34.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
33.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
33.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
33.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
33.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
32.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
32.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
32.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
32.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
31.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
31.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
31.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
31.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
31.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
31.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
31.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
30.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
30.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
29.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
29.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
28.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
28.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
27.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
27.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
27.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
27.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
27.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
26.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
25.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
23.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
22.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
21.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
19.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
0.6
CPT0014450004
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0009060003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0077110003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0017410003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0092190003
Normal
0.3
CPT0010160003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0088690003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0001340003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0077320001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0077500001
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0066470004
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0069010001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0092800003
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0078840001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0084560003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0064370003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0076330003
Tumor
-0.4
CPT0078670001
Normal
-0.6
CPT0078510003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
