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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
333.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
146.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
137.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
118.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
109.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
108.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
103.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
94.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
90.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
78.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
72.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
67.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
63.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
59.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
58.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
55.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
55.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
53.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
51.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
49.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
48.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
45.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
43.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
43.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
41.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
41.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
41.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
40.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
38.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
37.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
35.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
32.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
31.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
30.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
29.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
28.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
27.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
26.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
25.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
24.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
21.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
17.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLP2 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
107.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
637.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
537.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
485.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
466.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
444.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
438.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
422.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
403.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
383.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
345.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
325.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
323.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
310.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
309.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
305.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
295.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
294.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
284.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
283.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
271.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
270.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
267.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
263.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
259.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
259.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
257.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
256.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
246.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
246.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
244.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
230.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
229.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
226.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
225.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
225.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
225.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
223.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
223.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
220.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
218.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
218.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
217.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
213.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
212.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
208.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
206.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
206.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
205.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
204.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
202.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
202.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
200.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
200.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
199.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
197.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
196.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
195.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
193.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
193.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
193.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
191.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
190.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
188.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
187.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
184.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
184.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
183.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
183.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
183.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
183.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
180.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
179.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
177.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
175.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
174.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
172.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
172.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
170.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
168.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
167.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
167.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
165.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
165.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
165.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
164.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
164.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
164.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
163.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
162.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
161.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
159.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
159.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
159.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
158.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
158.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
158.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
156.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
156.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
156.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
156.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
154.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
153.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
152.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
151.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
151.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
150.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
150.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
149.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
148.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
147.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
147.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
147.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
146.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
146.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
145.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
145.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
145.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
144.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
144.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
143.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
142.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
141.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
141.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
141.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
140.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
140.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
140.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
139.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
136.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
136.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
135.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
135.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
135.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
135.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
135.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
135.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
134.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
133.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
132.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
132.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
132.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
132.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
132.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
131.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
130.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
130.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
129.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
129.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
128.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
128.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
128.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
128.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
128.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
128.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
127.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
127.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
127.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
127.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
126.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
126.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
126.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
125.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
125.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
125.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
125.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
124.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
124.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
124.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
123.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
122.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
122.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
122.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
121.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
121.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
121.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
119.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
119.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
118.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
117.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
116.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
116.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
115.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
115.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
114.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
114.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
114.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
114.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
114.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
114.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
113.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
113.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
113.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
112.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
111.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
111.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
111.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
111.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
109.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
109.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
108.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
107.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
107.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
107.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
106.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
106.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
106.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
105.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
105.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
104.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
104.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
103.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
103.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
102.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
101.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
100.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
100.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
100.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
99.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
99.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
99.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
98.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
98.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
98.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
97.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
96.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
96.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
96.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
96.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
96.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
96.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
95.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
95.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
95.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
95.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
95.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
94.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
94.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
94.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
94.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
94.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
93.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
93.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
93.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
93.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
92.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
92.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
91.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
91.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
90.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
90.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
90.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
90.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
90.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
89.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
89.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
89.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
89.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
89.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
89.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
89.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
88.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
87.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
87.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
87.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
87.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
87.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
87.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
87.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
86.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
86.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
86.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
86.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
85.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
85.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
85.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
84.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
84.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
84.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
84.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
83.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
83.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
83.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
83.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
82.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
82.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
82.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
81.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
81.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
81.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
81.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
80.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
80.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
80.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
80.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
79.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
79.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
79.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
79.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
78.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
78.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
78.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
78.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
78.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
78.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
77.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
77.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
77.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
77.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
76.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
76.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
76.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
76.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
76.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
75.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
75.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
75.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
75.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
74.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
74.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
74.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
74.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
74.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
73.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
73.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
73.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
73.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
71.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
71.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
71.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
71.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
71.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
70.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
70.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
70.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
69.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
69.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
68.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
68.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
67.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
67.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
67.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
67.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
66.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
66.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
66.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
66.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
66.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
66.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
65.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
65.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
65.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
65.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
65.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
64.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
64.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
64.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
63.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
63.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
63.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
62.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
62.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
62.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
62.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
61.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
61.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
61.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
59.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
59.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
59.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
58.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
58.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
58.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
58.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
57.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
57.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
57.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
57.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
56.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
56.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
56.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
55.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
55.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
54.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
54.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
54.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
54.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
54.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
54.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
53.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
53.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
53.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
52.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
52.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
52.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
51.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
51.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
51.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
50.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
50.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
49.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
49.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
49.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
49.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
48.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
48.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
48.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
48.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
48.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
48.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
48.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
47.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
47.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
47.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
47.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
47.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
47.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
46.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
46.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
46.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
45.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
45.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
45.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
45.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
45.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
45.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
44.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
44.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
44.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
43.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
42.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
42.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
42.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
42.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
42.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
42.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
42.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
41.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
41.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
41.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
41.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
40.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
39.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
39.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
39.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
39.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
39.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
39.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
38.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
38.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
37.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
37.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
37.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
37.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
36.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
35.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
34.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
33.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
33.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
32.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
31.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
31.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
31.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
30.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
30.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
29.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
27.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
25.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
25.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
22.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
22.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
99.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
387.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
319.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
287.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
281.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
259.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
253.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
247.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
244.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
232.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
199.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
193.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
183.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
182.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
178.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
155.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
155.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
155.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
148.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
142.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
130.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
129.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
127.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
120.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
119.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
113.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
108.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
107.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
107.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
107.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
104.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
102.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
102.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
101.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
96.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
96.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
95.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
95.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
93.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
93.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
93.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
92.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
91.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
91.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
91.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
89.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
89.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
85.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
84.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
84.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
83.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
80.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
79.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
74.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
73.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
72.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
71.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
71.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
69.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
69.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
69.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
68.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
68.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
67.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
67.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
63.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
63.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
62.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
62.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
61.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
59.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
58.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
58.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
56.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
55.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
54.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
52.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
49.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
48.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
46.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
45.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
44.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
42.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
39.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
39.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
37.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
36.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
36.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
31.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
27.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
24.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLP2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
103.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
389.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
315.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
306.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
295.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
282.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
279.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
267.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
263.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
262.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
260.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
257.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
253.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
245.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
242.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
241.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
238.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
236.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
235.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
232.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
218.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
218.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
215.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
213.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
210.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
204.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
201.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
195.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
195.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
190.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
186.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
184.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
178.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
176.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
174.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
173.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
172.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
172.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
167.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
164.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
158.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
158.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
156.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
156.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
154.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
151.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
151.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
150.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
150.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
149.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
149.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
148.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
147.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
146.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
144.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
143.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
142.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
142.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
139.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
138.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
138.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
136.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
135.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
134.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
134.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
133.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
131.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
131.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
130.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
130.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
129.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
129.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
128.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
127.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
126.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
126.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
125.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
124.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
124.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
123.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
123.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
122.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
122.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
121.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
119.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
118.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
118.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
117.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
116.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
116.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
116.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
115.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
115.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
115.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
114.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
114.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
114.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
113.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
113.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
112.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
112.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
112.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
110.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
110.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
110.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
109.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
109.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
109.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
108.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
108.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
108.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
106.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
105.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
104.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
104.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
104.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
103.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
103.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
102.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
102.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
100.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
100.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
99.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
99.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
98.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
98.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
98.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
98.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
97.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
97.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
95.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
94.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
92.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
92.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
91.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
91.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
90.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
90.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
90.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
90.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
90.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
89.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
89.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
89.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
88.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
88.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
87.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
87.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
87.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
86.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
85.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
84.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
84.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
84.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
83.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
82.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
82.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
81.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
80.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
79.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
79.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
79.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
79.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
79.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
78.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
78.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
77.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
76.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
76.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
75.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
74.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
74.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
74.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
74.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
73.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
73.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
73.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
73.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
72.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
72.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
71.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
71.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
71.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
71.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
71.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
70.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
70.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
69.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
69.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
69.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
69.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
69.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
68.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
68.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
67.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
67.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
66.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
65.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
65.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
65.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
65.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
65.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
64.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
63.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
62.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
62.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
62.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
62.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
62.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
61.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
61.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
60.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
60.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
60.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
60.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
59.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
59.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
57.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
56.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
56.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
56.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
56.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
55.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
54.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
52.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
51.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
51.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
51.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
50.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
50.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
50.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
49.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
49.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
49.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
48.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
47.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
47.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
47.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
47.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
46.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
46.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
44.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
44.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
43.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
42.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
42.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
41.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
40.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
40.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
40.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
40.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
39.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
39.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
38.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
38.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
38.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
38.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
36.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
34.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
33.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
32.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
32.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
31.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
31.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
30.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
29.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
29.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
23.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069160003
Tumor
1.8
CPT0063630003
Tumor
1.7
CPT0000640003
Tumor
1.6
CPT0012180003
Tumor
1.6
CPT0088690003
Tumor
1.3
CPT0092290003
Tumor
1.2
CPT0014450004
Tumor
1.2
CPT0086950003
Tumor
1.1
CPT0065690003
Tumor
1.1
CPT0081880003
Tumor
1.1
CPT0014160003
Tumor
1.1
CPT0012670003
Tumor
1.0
CPT0088550004
Tumor
1.0
CPT0014370004
Tumor
1.0
CPT0065930003
Tumor
0.9
CPT0076330003
Tumor
0.9
CPT0002350011
Tumor
0.9
CPT0023350003
Tumor
0.7
CPT0025290003
Tumor
0.7
CPT0079410003
Tumor
0.7
CPT0069000003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0017850003
Tumor
0.7
CPT0010110003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0024670003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0088760003
Tumor
0.6
CPT0088480003
Tumor
0.5
CPT0092160003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0023690003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0081600003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0084560003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0086360003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0000660001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0071150004
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0001350001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0014470001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0086370003
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0017410003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0089040001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0025230003
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0087040003
Tumor
-0.4
CPT0089480003
Normal
-0.4
CPT0079380003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0012640003
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0063320003
Tumor
-0.4
CPT0092800003
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0006630003
Tumor
-0.5
CPT0024680001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0081620001
Normal
-0.5
CPT0011240003
Tumor
-0.5
CPT0088970003
Tumor
-0.5
CPT0012770003
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0006950001
Normal
-0.6
CPT0063640001
Normal
-0.6
CPT0009080003
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0025920001
Normal
-0.7
CPT0078930003
Tumor
-0.7
CPT0012570003
Normal
-0.7
CPT0018250001
Normal
-0.7
CPT0064370003
Tumor
-0.8
CPT0079430001
Normal
-0.8
CPT0015730003
Tumor
-0.8
CPT0006730001
Normal
-0.8
CPT0002270011
Tumor
-0.8
CPT0012370003
Tumor
-0.8
CPT0064400001
Normal
-0.9
CPT0087050003
Normal
-1.0
CPT0092740003
Normal
-1.0
CPT0000790001
Normal
N/A
CPT0066480003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0065450001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0001540009
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
