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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
113.7
nTPM
HPA Brain:
244.7
nTPM
GTEx:
113.7
nTPM
FANTOM5:
33.2
Scaled Tags Per Million
Pig:
309.5
nTPM
Mouse:
655.3
nTPM
Allen mouse:
23.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
244.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 190.0
2666
Male, age 74, left hemisphere
388.5
1827
Male, age 72, unknown
242.2
2219
Male, age 76, both hemispheres
188.1
2019
Male, age 18, unknown
182.5
2828
Female, age 72, unknown
175.4
2411
Female, age 72, unknown
172.3
1870
Female, age 42, unknown
149.6
2586
Male, age 75, left hemisphere
137.5
1833
Male, age 53, unknown
136.1
1830
Male, age 51, unknown
127.2
Dorsal raphe nucleus nTPM: 163.7
2298
Female, age 72, unknown
222.8
2047
Male, age 72, unknown
167.6
2750
Male, age 76, both hemispheres
166.5
1828
Male, age 53, unknown
163.4
2016
Female, age 72, unknown
98.3
Inferior colliculus nTPM: 175.1
2097
Female, age 72, unknown
216.9
1848
Female, age 42, unknown
167.1
2849
Male, age 72, unknown
159.2
1890
Male, age 53, unknown
157.4
Median raphe nucleus nTPM: 244.7
2220
Male, age 76, midline
244.7
Periaquaductal grey, anterior nTPM: 194.8
1795
Male, age 51, unknown
216.3
1947
Male, age 18, unknown
189.7
2502
Female, age 75, unknown
178.3
Periaquaductal grey, dorsal nTPM: 147.8
1831
Male, age 72, unknown
173.2
2850
Male, age 76, both hemispheres
148.8
1840
Male, age 53, unknown
144.3
2464
Female, age 72, unknown
124.8
Periaquaductal grey, lateral nTPM: 125.9
2053
Male, age 18, unknown
141.4
2140
Male, age 76, both hemispheres
124.0
2272
Male, age 74, both hemispheres
112.4
Pretectal area nTPM: 223.8
1816
Male, age 51, unknown
356.7
1817
Female, age 42, unknown
320.2
1944
Female, age 72, unknown
315.2
2007
Male, age 72, unknown
293.5
1815
Male, age 53, unknown
249.0
2667
Female, age 75, unknown
211.8
2224
Female, age 72, unknown
180.2
2825
Male, age 18, unknown
156.2
2316
Male, age 76, right hemisphere
145.3
2407
Male, age 75, both hemispheres
135.9
2273
Male, age 74, both hemispheres
97.6
Red nucleus nTPM: 134.7
2785
Male, age 18, unknown
183.2
2584
Male, age 75, left hemisphere
171.3
1821
Female, age 72, unknown
165.6
1954
Female, age 42, unknown
141.1
2823
Male, age 76, right hemisphere
132.2
2588
Male, age 74, left hemisphere
123.6
2725
Female, age 75, unknown
119.9
2769
Male, age 72, unknown
119.3
2227
Male, age 72, unknown
118.8
1904
Male, age 53, unknown
117.4
1865
Male, age 51, unknown
113.9
2503
Female, age 72, unknown
109.9
Substantia nigra nTPM: 171.7
1889
Female, age 72, unknown
260.8
1941
Male, age 53, unknown
252.4
1916
Female, age 42, unknown
224.3
2665
Male, age 74, both hemispheres
183.7
1851
Male, age 51, unknown
170.4
2241
Male, age 72, unknown
144.1
2409
Female, age 72, unknown
132.5
2583
Male, age 75, right hemisphere
127.3
2699
Male, age 18, unknown
118.2
2590
Female, age 75, unknown
103.7
Superior colliculus nTPM: 193.1
2668
Female, age 75, unknown
340.9
2087
Female, age 72, unknown
258.4
2261
Male, age 18, unknown
218.3
1796
Male, age 53, unknown
208.0
1895
Male, age 76, right hemisphere
195.5
1839
Male, age 51, unknown
158.5
2664
Male, age 75, both hemispheres
155.9
1913
Female, age 42, unknown
153.6
2587
Male, age 74, left hemisphere
123.2
1995
Male, age 72, unknown
118.6
Ventral tegmental area nTPM: 177.5
2218
Male, age 76, both hemispheres
232.8
1915
Female, age 42, unknown
192.0
2410
Female, age 72, unknown
177.7
1942
Male, age 51, unknown
166.7
2223
Female, age 72, unknown
160.5
2021
Male, age 53, unknown
135.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
113.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 113.7
Samples: 139
Max nTPM: 781.5
Min nTPM: 14.9
Std nTPM: 109.5
Median nTPM: 74.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
781.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
573.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
369.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
340.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
319.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
300.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
298.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
294.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
290.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
289.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
287.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
267.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
265.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
260.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
251.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
233.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
233.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
231.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
222.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
213.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
210.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
201.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
199.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
192.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
192.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
192.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
191.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
189.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
186.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
179.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
176.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
173.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
170.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
167.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
161.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
159.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
155.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
154.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
146.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
145.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
144.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
141.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
138.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
136.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
136.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
135.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
134.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
134.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
130.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
124.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
121.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
117.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
115.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
114.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
113.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
105.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
99.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
99.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
99.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
90.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
90.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
87.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
87.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
86.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
85.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
85.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
83.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
81.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
77.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
74.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
72.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
66.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
66.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
65.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
62.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
62.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
62.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
62.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
60.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
59.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
57.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
56.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
56.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
53.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
53.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
52.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
50.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
48.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
45.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
45.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
44.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
44.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
43.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
42.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
42.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
41.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
40.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
40.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
40.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
40.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
40.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
38.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
38.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
37.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
36.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
36.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
35.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
35.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
35.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
35.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
32.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
31.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
31.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
30.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
29.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
29.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
28.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
28.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
28.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
28.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
28.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
27.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
27.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
26.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
25.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
25.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
23.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
22.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
22.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
22.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
21.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
21.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
20.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
20.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
19.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
17.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
16.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
15.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
14.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
655.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 655.4
Samples: 4
Max nTPM: 672.2
Min nTPM: 624.9
Sample A
Male
624.9
Sample B
Male
657.2
Sample C
Female
672.2
Sample D
Female
667.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.