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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
227.6
nTPM
HPA Brain:
482.6
nTPM
GTEx:
227.6
nTPM
FANTOM5:
510.3
Scaled Tags Per Million
Pig:
444.3
nTPM
Mouse:
1040.3
nTPM
Allen mouse:
23.8
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
482.6
Sample id
Sample description
nTPM
Hippocampus nTPM: 296.0
1898
Male, age 80, left hemisphere
432.5
2621
Female, age 67, right hemisphere
396.9
1855
Male, age 76, left hemisphere
299.0
2148
Female, age 91, left hemisphere
258.7
1911
Female, age 85, right hemisphere
220.9
2529
Female, age 94, left hemisphere
167.9
Dentate gyrus nTPM: 316.9
1927
Female, age 91, both hemispheres
466.5
2530
Female, age 94, left hemisphere
350.9
2010
Male, age 76, both hemispheres
336.2
2531
Female, age 67, both hemispheres
273.9
2246
Female, age 85, both hemispheres
260.7
2528
Male, age 74, both hemispheres
213.1
Entorhinal gyrus nTPM: 354.1
2613
Female, age 94, left hemisphere
466.8
2764
Male, age 80, right hemisphere
451.4
1938
Female, age 85, left hemisphere
367.7
1787
Male, age 76, left hemisphere
354.8
2686
Male, age 75, right hemisphere
293.1
2117
Female, age 91, right hemisphere
190.8
Hippocampus, CA1 nTPM: 388.4
2749
Male, age 80, left hemisphere
757.4
1873
Female, age 85, both hemispheres
328.7
2045
Male, age 76, both hemispheres
311.6
2527
Male, age 74, both hemispheres
301.8
2082
Female, age 91, right hemisphere
242.3
Hippocampus, CA2 nTPM: 317.0
1892
Male, age 76, both hemispheres
475.2
1963
Male, age 80, left hemisphere
390.1
2437
Female, age 94, left hemisphere
298.8
1940
Female, age 85, left hemisphere
279.1
2113
Female, age 91, right hemisphere
231.7
2249
Male, age 74, both hemispheres
227.1
Hippocampus, CA3 nTPM: 341.2
2137
Male, age 80, left hemisphere
587.5
1867
Male, age 76, both hemispheres
354.9
2620
Female, age 94, left hemisphere
328.0
2861
Female, age 67, both hemispheres
308.0
2436
Male, age 74, both hemispheres
243.8
1891
Female, age 85, both hemispheres
224.7
Parahippocampal cortex nTPM: 371.0
2245
Female, age 91, both hemispheres
484.8
1990
Female, age 91, right hemisphere
446.1
2250
Female, age 67, right hemisphere
442.2
1850
Male, age 80, both hemispheres
420.6
2693
Female, age 94, both hemispheres
371.4
1933
Female, age 85, both hemispheres
366.1
2532
Female, age 72, left hemisphere
350.5
2622
Female, age 67, right hemisphere
328.0
2018
Male, age 76, both hemispheres
254.9
2692
Male, age 74, both hemispheres
245.1
Perirhinal gyrus nTPM: 482.6
1847
Female, age 91, left hemisphere
624.6
2521
Female, age 94, right hemisphere
560.6
1794
Male, age 80, right hemisphere
463.3
1841
Female, age 85, right hemisphere
394.8
2848
Male, age 76, right hemisphere
369.9
Subiculum nTPM: 269.1
1901
Male, age 80, both hemispheres
380.3
1977
Female, age 85, both hemispheres
324.5
2619
Male, age 74, both hemispheres
254.6
2438
Female, age 94, left hemisphere
250.2
2042
Male, age 76, both hemispheres
244.0
2729
Female, age 91, right hemisphere
160.9
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
227.6
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 227.6
Samples: 197
Max nTPM: 710.2
Min nTPM: 11.6
Std nTPM: 169.7
Median nTPM: 194.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
710.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
688.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
683.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
650.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
638.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
637.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
618.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
601.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
571.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
551.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
541.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
534.2
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
531.8
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
521.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
517.1
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
512.0
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
502.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
495.6
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
493.9
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
481.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
477.2
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
476.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
469.6
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
464.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
444.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
443.3
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
439.6
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
436.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
435.7
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
432.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
432.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
429.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
417.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
414.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
411.9
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
403.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
401.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
395.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
390.9
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
384.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
380.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
380.7
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
372.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
357.8
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
354.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
354.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
341.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
337.6
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
333.7
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
324.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
320.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
316.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
315.7
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
310.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
308.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
306.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
304.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
303.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
303.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
289.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
289.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
288.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
277.6
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
276.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
273.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
271.8
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
268.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
267.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
261.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
258.7
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
258.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
255.6
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
247.1
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
244.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
244.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
244.4
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
243.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
240.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
233.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
230.9
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
228.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
228.2
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
227.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
226.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
225.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
225.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
222.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
219.8
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
217.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
213.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
206.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
204.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
204.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
204.1
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
203.1
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
201.9
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
198.9
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
198.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
194.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
194.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
185.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
184.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
181.8
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
180.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
168.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
168.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
167.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
165.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
164.2
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
163.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
162.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
158.3
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
158.2
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
158.1
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
156.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
155.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
152.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
151.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
150.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
149.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
148.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
146.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
145.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
138.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
136.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
136.5
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
136.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
132.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
125.1
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
121.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
119.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
116.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
113.1
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
111.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
108.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
99.4
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
99.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
98.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
98.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
97.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
90.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
88.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
88.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
88.2
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
86.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
84.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
83.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
82.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
82.4
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
81.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
79.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
75.9
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
74.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
74.0
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
70.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
70.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
63.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
62.6
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
61.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
59.7
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
59.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
56.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
55.9
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
55.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
55.8
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
51.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
49.8
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
48.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
47.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
47.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
46.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
45.7
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
43.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
43.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
43.3
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
41.8
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
41.1
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
40.6
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
40.5
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
39.1
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
37.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
36.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
35.6
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
34.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
34.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
34.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
32.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
32.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
31.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
29.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
28.8
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
28.5
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
28.4
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
25.7
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
25.0
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
17.8
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
11.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1040.3
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 1040.3
Samples: 4
Max nTPM: 1218.6
Min nTPM: 946.9
Sample A
Male
946.9
Sample B
Male
1015.5
Sample C
Female
980.3
Sample D
Female
1218.6
Hippocampal formation nTPM: 984.5
Samples: 4
Max nTPM: 1078.4
Min nTPM: 913.6
Sample A
Male
970.6
Sample B
Male
975.5
Sample C
Female
1078.4
Sample D
Female
913.6
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.