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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APMAP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
109.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
213.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
205.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
196.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
190.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
189.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
168.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
166.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
157.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
153.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
140.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
139.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
139.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
136.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
130.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
130.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
129.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
129.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
127.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
127.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
127.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
125.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
125.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
124.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
124.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
123.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
117.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
116.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
111.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
109.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
109.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
109.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
108.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
108.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
107.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
106.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
105.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
101.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
97.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
97.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
97.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
96.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
90.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
87.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
85.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
84.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
84.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
83.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
81.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
78.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
73.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
71.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
69.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
65.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
64.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
64.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
62.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
60.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
58.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
54.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
53.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
53.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
49.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
44.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APMAP is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
222.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
163.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
160.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
153.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
148.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
144.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
132.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
132.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
125.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
125.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
124.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
119.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
117.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
117.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
117.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
117.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
115.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
114.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
112.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
112.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
112.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
109.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
107.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
106.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
105.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
105.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
104.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
102.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
101.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
100.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
99.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
99.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
99.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
99.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
99.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
98.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
96.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
96.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
95.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
92.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
92.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
89.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
89.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
89.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
89.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
89.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
88.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
88.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
88.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
88.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
87.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
87.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
87.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
86.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
85.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
85.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
85.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
84.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
84.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
83.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
83.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
83.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
83.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
82.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
82.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
82.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
82.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
82.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
81.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
81.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
80.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
80.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
80.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
80.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
80.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
80.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
80.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
79.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
79.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
79.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
79.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
79.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
79.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
78.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
78.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
78.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
78.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
78.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
78.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
78.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
78.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
77.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
77.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
77.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
77.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
76.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
76.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
76.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
76.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
76.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
76.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
76.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
76.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
76.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
76.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
75.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
75.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
75.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
75.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
75.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
75.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
75.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
75.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
75.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
74.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
74.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
74.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
74.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
73.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
73.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
73.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
73.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
73.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
73.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
73.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
73.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
73.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
73.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
73.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
73.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
72.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
72.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
72.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
72.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
72.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
72.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
72.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
72.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
72.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
71.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
71.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
71.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
71.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
71.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
71.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
71.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
71.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
71.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
71.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
71.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
70.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
70.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
70.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
70.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
70.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
70.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
70.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
70.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
69.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
69.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
69.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
69.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
69.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
69.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
69.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
69.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
69.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
69.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
68.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
68.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
68.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
68.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
68.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
68.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
68.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
68.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
68.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
68.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
68.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
68.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
68.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
68.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
68.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
68.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
68.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
68.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
68.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
68.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
68.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
68.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
67.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
67.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
67.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
67.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
67.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
67.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
67.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
67.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
67.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
66.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
66.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
66.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
66.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
66.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
66.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
66.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
66.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
66.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
66.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
66.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
66.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
65.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
65.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
65.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
65.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
65.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
65.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
65.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
65.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
65.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
65.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
65.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
65.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
65.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
65.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
65.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
64.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
64.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
64.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
64.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
64.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
64.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
64.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
64.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
64.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
63.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
63.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
63.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
63.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
63.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
63.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
63.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
63.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
63.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
63.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
63.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
62.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
62.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
62.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
62.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
62.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
62.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
62.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
62.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
61.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
61.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
61.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
61.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
61.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
61.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
61.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
61.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
61.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
61.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
61.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
61.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
60.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
60.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
60.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
60.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
60.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
60.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
60.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
60.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
60.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
60.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
60.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
60.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
60.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
59.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
59.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
59.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
59.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
59.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
59.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
59.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
59.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
59.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
59.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
59.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
58.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
58.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
58.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
58.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
58.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
58.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
58.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
58.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
58.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
58.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
57.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
57.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
57.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
57.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
57.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
57.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
57.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
57.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
57.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
57.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
56.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
56.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
56.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
56.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
56.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
56.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
56.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
56.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
56.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
56.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
55.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
55.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
55.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
55.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
55.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
55.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
55.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
55.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
55.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
55.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
54.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
54.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
54.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
54.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
54.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
54.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
54.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
54.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
54.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
54.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
54.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
54.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
53.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
53.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
53.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
53.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
52.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
52.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
52.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
52.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
52.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
52.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
52.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
52.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
51.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
51.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
51.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
51.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
51.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
51.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
51.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
51.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
51.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
51.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
51.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
50.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
50.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
50.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
50.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
50.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
50.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
50.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
50.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
50.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
49.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
49.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
49.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
49.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
49.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
49.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
48.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
48.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
48.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
48.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
48.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
48.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
48.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
48.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
47.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
47.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
47.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
47.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
47.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
47.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
47.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
47.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
47.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
47.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
47.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
47.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
47.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
47.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
46.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
46.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
46.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
46.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
46.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
45.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
45.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
45.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
44.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
44.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
44.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
44.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
43.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
43.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
43.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
43.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
43.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
43.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
43.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
42.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
42.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
42.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
42.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
42.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
42.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
41.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
41.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
41.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
41.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
41.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
40.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
40.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
40.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
40.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
40.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
40.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
40.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
39.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
39.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
39.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
39.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
39.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
39.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
39.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
38.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
38.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
38.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
38.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
38.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
37.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
37.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
37.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
37.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
37.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
36.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
36.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
36.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
35.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
35.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
35.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
35.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
35.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
34.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
34.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
34.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
34.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
34.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
33.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
33.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
32.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
31.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
30.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
29.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
29.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
29.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
28.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
26.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
26.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
24.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
23.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
19.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
19.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
18.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APMAP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
74.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
188.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
146.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
146.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
133.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
122.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
122.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
121.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
118.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
117.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
110.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
110.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
109.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
108.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
93.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
93.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
92.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
92.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
91.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
91.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
90.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
87.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
87.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
87.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
84.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
84.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
84.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
84.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
83.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
83.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
83.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
82.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
82.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
81.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
80.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
80.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
79.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
79.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
77.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
77.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
75.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
73.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
73.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
73.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
72.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
72.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
71.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
71.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
71.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
70.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
70.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
70.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
70.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
68.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
67.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
66.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
65.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
64.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
64.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
64.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
63.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
63.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
63.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
63.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
63.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
62.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
62.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
61.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
60.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
60.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
59.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
59.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
58.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
58.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
57.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
57.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
56.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
52.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
52.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
52.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
51.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
50.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
50.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
47.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
45.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
45.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
43.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
42.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
42.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
42.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
41.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APMAP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
86.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
259.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
237.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
202.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
183.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
182.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
181.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
180.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
179.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
179.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
177.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
174.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
170.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
169.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
163.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
161.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
159.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
157.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
155.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
152.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
149.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
148.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
147.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
146.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
146.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
144.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
144.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
144.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
142.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
140.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
138.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
138.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
136.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
134.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
133.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
131.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
130.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
129.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
129.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
125.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
125.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
125.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
124.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
124.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
123.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
123.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
123.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
120.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
120.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
119.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
118.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
118.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
117.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
117.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
117.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
116.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
115.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
114.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
114.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
113.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
112.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
112.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
112.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
111.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
111.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
110.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
110.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
109.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
109.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
109.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
108.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
107.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
107.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
107.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
106.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
105.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
105.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
104.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
104.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
104.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
103.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
103.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
102.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
101.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
101.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
101.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
101.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
100.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
100.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
100.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
99.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
98.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
98.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
98.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
98.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
97.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
97.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
97.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
96.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
96.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
96.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
96.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
96.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
95.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
95.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
94.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
93.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
92.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
91.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
90.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
90.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
89.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
89.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
89.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
89.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
89.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
89.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
89.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
88.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
87.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
87.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
86.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
86.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
86.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
86.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
86.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
85.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
85.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
85.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
84.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
84.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
84.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
84.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
84.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
84.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
84.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
83.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
83.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
83.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
83.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
82.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
82.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
81.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
81.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
81.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
81.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
81.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
80.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
80.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
79.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
79.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
78.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
77.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
77.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
77.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
77.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
77.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
75.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
75.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
75.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
75.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
73.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
73.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
73.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
73.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
72.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
72.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
72.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
71.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
71.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
70.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
69.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
69.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
68.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
68.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
67.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
67.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
67.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
67.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
66.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
66.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
66.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
66.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
66.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
66.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
66.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
65.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
65.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
65.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
65.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
64.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
64.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
64.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
63.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
63.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
62.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
62.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
62.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
61.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
61.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
61.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
61.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
61.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
61.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
60.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
60.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
59.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
59.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
59.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
59.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
59.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
59.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
59.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
59.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
58.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
58.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
58.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
57.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
57.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
57.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
56.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
56.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
56.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
55.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
54.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
54.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
53.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
53.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
53.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
52.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
51.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
51.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
51.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
51.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
50.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
50.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
50.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
49.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
49.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
48.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
48.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
48.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
47.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
46.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
46.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
46.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
46.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
45.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
45.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
45.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
45.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
44.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
44.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
42.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
42.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
42.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
42.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
41.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
41.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
39.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
39.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
39.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
39.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
38.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
38.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
36.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
35.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
35.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
33.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
31.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
30.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
30.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
29.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
29.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
28.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
27.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
24.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
1.5
CPT0025110003
Tumor
1.4
CPT0011410003
Tumor
1.3
CPT0002350011
Tumor
1.2
CPT0023350003
Tumor
1.0
CPT0063630003
Tumor
1.0
CPT0012180003
Tumor
0.9
CPT0079270003
Tumor
0.8
CPT0081880003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0069160003
Tumor
0.7
CPT0078800003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0025050003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0089020003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0079510001
Normal
0.5
CPT0088550004
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0088690003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0065690003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0079230003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0025880003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0010120001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0064400001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0078840001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0000870016
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0012080003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0026420001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0017410003
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0066430001
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0012570003
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0009060003
Tumor
-0.6
CPT0012900004
Tumor
-0.7
CPT0012090003
Normal
-0.8
CPT0012770003
Normal
-0.8
CPT0012920003
Normal
-0.9
CPT0011240003
Tumor
-0.9
CPT0009080003
Normal
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.