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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNTA1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
177.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
163.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
119.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
115.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
104.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
93.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
89.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
72.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
72.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
70.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
70.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
65.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
64.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
64.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
64.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
64.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
61.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
58.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
57.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
56.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
54.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
52.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
52.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
52.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
49.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
48.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
48.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
47.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
47.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
45.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
44.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
43.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
42.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
41.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
40.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
38.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
38.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
37.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
36.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
34.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
33.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
32.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
31.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
31.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
31.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
30.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
29.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
29.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
29.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
27.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
26.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNTA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
183.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
144.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
142.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
131.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
106.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
99.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
94.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
79.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
75.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
71.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
71.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
70.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
65.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
63.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
61.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
61.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
58.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
57.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
57.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
53.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
53.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
50.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
50.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
49.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
48.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
48.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
48.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
46.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
45.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
45.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
45.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
44.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
44.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
43.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
42.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
42.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
42.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
42.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
41.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
41.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
41.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
40.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
40.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
40.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
39.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
39.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
38.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
38.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
38.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
38.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
38.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
37.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
37.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
37.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
36.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
36.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
35.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
35.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
35.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
35.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
35.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
34.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
34.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
34.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
34.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
34.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
33.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
33.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
33.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
33.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
32.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
32.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
32.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
32.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
32.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
31.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
31.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
31.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
31.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
31.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
31.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
31.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
31.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
30.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
30.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
30.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
29.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
29.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
29.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
28.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
28.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
28.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
28.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
27.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
27.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
27.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
27.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
27.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
27.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
27.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
27.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
26.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
26.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
26.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
26.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
25.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
25.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
25.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
25.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
25.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
25.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
24.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
24.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
24.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
23.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
23.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
22.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
22.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
22.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
22.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
21.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
21.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
21.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
20.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
20.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
20.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
19.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
18.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
18.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
17.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
16.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
16.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
15.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
11.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
9.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
8.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
7.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
5.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNTA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
102.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
95.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
86.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
76.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
60.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
59.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
55.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
47.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
46.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
42.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
34.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
34.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
33.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
32.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
30.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
27.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
26.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
25.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
25.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
25.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
22.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
21.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
15.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
9.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
9.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
8.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
6.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNTA1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
182.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
163.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
163.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
143.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
118.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
111.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
110.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
105.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
89.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
85.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
80.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
73.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
72.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
64.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
64.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
63.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
61.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
61.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
56.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
53.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
50.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
48.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
43.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
43.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
42.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
39.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
39.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
37.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
37.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
36.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
36.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
36.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
34.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
33.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
33.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
32.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
32.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
32.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
32.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
29.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
29.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
29.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
27.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
27.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
26.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
24.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
23.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
22.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
21.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
21.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
21.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
18.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
17.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
17.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
17.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
17.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
16.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
15.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
14.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
14.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
13.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
12.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
12.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
12.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
11.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
11.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
11.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
10.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
10.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
9.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
9.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
9.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
8.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
7.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
6.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
5.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
5.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
4.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
4.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
2.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
1.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
1.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
1.8
CPT0002270011
Tumor
1.7
CPT0065450001
Normal
0.9
CPT0092290003
Tumor
0.7
CPT0012770003
Normal
0.7
CPT0000790001
Normal
0.7
CPT0089480003
Normal
0.6
CPT0020130001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0011240003
Tumor
0.5
CPT0010170001
Normal
0.5
CPT0086370003
Normal
0.5
CPT0012090003
Normal
0.5
CPT0092740003
Normal
0.5
CPT0086830003
Normal
0.5
CPT0014350001
Normal
0.5
CPT0026420001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0025610001
Normal
0.5
CPT0078670001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0020020001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0006950001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0078840001
Normal
0.4
CPT0075570001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0066480003
Tumor
0.4
CPT0079000001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0069010001
Normal
0.4
CPT0092310003
Normal
0.4
CPT0007870001
Normal
0.4
CPT0001230001
Normal
0.4
CPT0000890001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0077500001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0002370001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0088570001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0089460004
Tumor
0.3
CPT0063640001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0065930003
Tumor
0.3
CPT0023710001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0088710001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0012900004
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0065820001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0063330001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0075170001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0021240003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0076330003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0012920003
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0069000003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0087040003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0088630003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0019130003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0023690003
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0065430003
Tumor
-0.5
CPT0065870003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0078800003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0001220008
Tumor
-0.6
CPT0084560003
Tumor
-0.6
CPT0088480003
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0081880003
Tumor
-0.6
CPT0025880003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0001540009
Tumor
-0.7
CPT0012550003
Tumor
-0.7
CPT0002350011
Tumor
-0.7
CPT0015730003
Tumor
-0.8
CPT0078830003
Tumor
-0.8
CPT0000870016
Tumor
-0.8
CPT0086820003
Tumor
-0.8
CPT0063630003
Tumor
-0.9
CPT0010110003
Tumor
-0.9
CPT0023350003
Tumor
-0.9
CPT0079270003
Tumor
-0.9
CPT0077110003
Tumor
-1.0
CPT0001180009
Tumor
-1.0
CPT0088550004
Tumor
-1.1
CPT0012280003
Tumor
-1.1
CPT0012180003
Tumor
-1.4
CPT0078990003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
