HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:41.8 nTPM
HPA Brain:16.4 nTPM
GTEx:41.8 nTPM
FANTOM5:58.0 Scaled Tags Per Million
Pig:17.0 nTPM
Mouse:24.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039262Antibody HPA045244Antibody HPA059197
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 16.4
2529 Female, age 94, left hemisphere 21.1
2621 Female, age 67, right hemisphere 19.7
1855 Male, age 76, left hemisphere 17.3
1898 Male, age 80, left hemisphere 15.0
1911 Female, age 85, right hemisphere 13.9
2148 Female, age 91, left hemisphere 11.7
Dentate gyrus
nTPM: 14.1
2530 Female, age 94, left hemisphere 17.0
2531 Female, age 67, both hemispheres 15.9
2528 Male, age 74, both hemispheres 15.1
2010 Male, age 76, both hemispheres 13.6
2246 Female, age 85, both hemispheres 12.1
1927 Female, age 91, both hemispheres 10.9
Entorhinal gyrus
nTPM: 10.7
2686 Male, age 75, right hemisphere 15.7
2117 Female, age 91, right hemisphere 13.8
1787 Male, age 76, left hemisphere 11.8
1938 Female, age 85, left hemisphere 9.3
2613 Female, age 94, left hemisphere 7.6
2764 Male, age 80, right hemisphere 6.1
Hippocampus, CA1
nTPM: 10.4
1873 Female, age 85, both hemispheres 15.3
2527 Male, age 74, both hemispheres 12.5
2045 Male, age 76, both hemispheres 11.0
2082 Female, age 91, right hemisphere 6.9
2749 Male, age 80, left hemisphere 6.1
Hippocampus, CA2
nTPM: 13.4
1963 Male, age 80, left hemisphere 16.6
2437 Female, age 94, left hemisphere 16.5
1940 Female, age 85, left hemisphere 13.5
1892 Male, age 76, both hemispheres 13.0
2249 Male, age 74, both hemispheres 10.9
2113 Female, age 91, right hemisphere 10.0
Hippocampus, CA3
nTPM: 16.4
2861 Female, age 67, both hemispheres 20.8
2436 Male, age 74, both hemispheres 17.6
1867 Male, age 76, both hemispheres 17.3
1891 Female, age 85, both hemispheres 16.9
2137 Male, age 80, left hemisphere 15.1
2620 Female, age 94, left hemisphere 10.5
Parahippocampal cortex
nTPM: 12.8
1990 Female, age 91, right hemisphere 18.4
2245 Female, age 91, both hemispheres 18.0
2250 Female, age 67, right hemisphere 16.2
2018 Male, age 76, both hemispheres 14.3
2622 Female, age 67, right hemisphere 13.2
2692 Male, age 74, both hemispheres 12.7
2532 Female, age 72, left hemisphere 11.0
1850 Male, age 80, both hemispheres 8.4
2693 Female, age 94, both hemispheres 8.1
1933 Female, age 85, both hemispheres 7.7
Perirhinal gyrus
nTPM: 10.8
2521 Female, age 94, right hemisphere 15.8
1841 Female, age 85, right hemisphere 13.3
1794 Male, age 80, right hemisphere 9.6
2848 Male, age 76, right hemisphere 9.2
1847 Female, age 91, left hemisphere 6.1
Subiculum
nTPM: 13.6
2042 Male, age 76, both hemispheres 18.8
2438 Female, age 94, left hemisphere 17.6
2619 Male, age 74, both hemispheres 15.7
1901 Male, age 80, both hemispheres 10.9
2729 Female, age 91, right hemisphere 9.4
1977 Female, age 85, both hemispheres 9.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 41.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.8
Samples: 197

Max nTPM: 177.3
Min nTPM: 11.2
Std nTPM: 25.0
Median nTPM: 36.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 177.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 173.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 134.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 133.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 99.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 95.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 92.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 90.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 83.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 81.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 79.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 58.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.0
FF:10169-103B7 60 years, female 62.3
FF:10153-102I9 76 years, female 53.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 17.0
Pig sample Sample description nTPM
Subiculum
nTPM: 10.6
Samples: 4

Max nTPM: 19.8
Min nTPM: 2.3
Sample A Female 8.9
Sample B Female 2.3
Sample C Male 11.3
Sample D Male 19.8
Dorsal hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 12.1
Min nTPM: 3.7
Sample A Female 3.7
Sample B Female 4.2
Sample C Male 12.1
Sample D Male 5.1
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 19.5
Min nTPM: 2.9
Sample A Female 19.5
Sample B Female 12.3
Sample C Male 15.4
Sample D Male 2.9
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 51.0
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 8.0
Sample C Male 51.0
Sample D Male 5.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.7
Sample A Male 25.5
Sample B Male 20.7
Sample C Female 28.2
Sample D Female 22.8
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 24.7
Min nTPM: 17.4
Sample A Male 23.1
Sample B Male 20.4
Sample C Female 17.4
Sample D Female 24.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69838564 Antisense, RP_050310_01_E04, Mouse strain C57BL/6J (56 days, male) 0.3

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