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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC23B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
104.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
73.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
70.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
69.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
69.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
69.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
68.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
68.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
66.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
65.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
64.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
63.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
62.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
60.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
58.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
56.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
56.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
56.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
55.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
55.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
52.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
49.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
49.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
49.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
47.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
45.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
44.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
43.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
43.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
42.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
41.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
41.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
40.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
39.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
39.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
38.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
36.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
36.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
36.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
35.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
34.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
34.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
33.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
32.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
30.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
30.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
29.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
18.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC23B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
162.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
126.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
111.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
106.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
104.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
103.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
100.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
96.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
95.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
90.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
89.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
88.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
88.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
87.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
87.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
84.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
83.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
83.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
83.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
82.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
81.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
81.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
80.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
79.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
78.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
77.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
76.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
75.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
75.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
74.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
74.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
74.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
73.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
73.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
72.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
72.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
72.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
71.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
70.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
69.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
68.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
67.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
67.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
67.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
67.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
66.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
66.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
65.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
64.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
64.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
64.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
63.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
63.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
63.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
63.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
63.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
62.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
62.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
61.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
61.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
61.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
61.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
61.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
61.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
61.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
60.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
60.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
60.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
60.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
60.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
59.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
59.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
59.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
59.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
59.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
58.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
58.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
58.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
58.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
57.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
57.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
57.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
57.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
57.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
57.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
56.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
56.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
56.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
56.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
56.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
55.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
55.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
55.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
55.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
55.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
55.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
55.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
55.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
55.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
54.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
54.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
54.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
54.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
54.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
54.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
54.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
54.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
54.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
53.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
53.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
53.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
53.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
53.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
53.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
53.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
53.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
53.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
53.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
52.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
52.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
52.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
52.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
52.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
52.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
52.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
52.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
52.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
52.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
52.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
52.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
52.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
52.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
51.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
51.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
51.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
51.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
51.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
51.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
51.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
51.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
50.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
50.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
50.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
50.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
50.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
50.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
50.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
50.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
50.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
50.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
49.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
48.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
48.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
48.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
48.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
48.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
48.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
48.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
48.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
48.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
48.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
47.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
47.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
47.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
47.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
47.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
46.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
46.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
46.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
46.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
46.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
46.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
46.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
46.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
45.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
45.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
45.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
45.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
45.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
45.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
45.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
45.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
45.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
45.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
45.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
45.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
45.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
45.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
44.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
44.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
44.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
44.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
44.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
44.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
44.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
44.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
44.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
44.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
44.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
44.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
43.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
43.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
43.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
43.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
43.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
43.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
43.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
43.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
43.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
43.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
43.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
42.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
42.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
42.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
42.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
42.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
42.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
42.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
42.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
42.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
42.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
42.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
41.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
41.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
41.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
41.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
41.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
41.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
41.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
40.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
40.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
40.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
40.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
40.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
40.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
40.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
39.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
39.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
39.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
39.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
39.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
39.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
39.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
39.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
39.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
39.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
39.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
39.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
39.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
38.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
38.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
38.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
38.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
38.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
38.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
38.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
38.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
38.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
38.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
37.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
37.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
37.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
36.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
36.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
36.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
36.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
36.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
36.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
36.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
36.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
36.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
36.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
36.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
36.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
36.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
36.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
36.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
36.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
35.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
35.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
35.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
35.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
35.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
34.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
34.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
34.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
34.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
34.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
34.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
34.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
34.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
34.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
33.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
33.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
33.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
33.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
32.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
32.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
32.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
32.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
32.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
32.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
32.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
32.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
32.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
32.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
31.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
31.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
31.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
31.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
31.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
31.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
31.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
31.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
31.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
30.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
30.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
30.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
30.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
30.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
29.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
29.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
29.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
29.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
29.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
29.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
29.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
28.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
28.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
28.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
28.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
28.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
27.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
27.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
26.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
25.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
24.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
23.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
23.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
22.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
22.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
20.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
19.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
19.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
18.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC23B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
159.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
102.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
90.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
81.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
77.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
71.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
69.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
67.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
67.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
66.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
65.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
65.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
64.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
64.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
63.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
63.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
59.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
58.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
58.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
54.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
53.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
53.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
53.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
53.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
50.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
50.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
50.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
49.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
49.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
48.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
48.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
48.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
47.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
47.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
47.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
47.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
47.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
47.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
46.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
45.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
44.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
44.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
44.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
44.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
43.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
43.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
42.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
42.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
42.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
42.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
40.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
39.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
38.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
37.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
37.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
36.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
35.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
34.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
34.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
34.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
33.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
29.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
28.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
28.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
27.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
27.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
25.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
24.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC23B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
349.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
232.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
178.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
140.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
126.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
118.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
114.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
107.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
106.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
105.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
102.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
100.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
96.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
95.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
94.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
93.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
93.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
91.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
90.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
89.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
88.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
88.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
87.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
79.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
78.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
78.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
78.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
77.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
77.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
76.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
76.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
76.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
73.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
72.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
72.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
72.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
71.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
71.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
71.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
67.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
67.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
66.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
66.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
66.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
65.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
65.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
64.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
64.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
64.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
63.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
63.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
63.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
62.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
62.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
62.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
62.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
60.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
60.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
60.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
59.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
59.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
59.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
59.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
59.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
58.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
58.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
57.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
56.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
56.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
55.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
55.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
54.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
54.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
54.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
54.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
54.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
53.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
53.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
53.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
53.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
53.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
52.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
52.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
52.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
51.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
51.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
51.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
51.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
51.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
51.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
51.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
51.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
51.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
51.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
50.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
50.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
49.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
49.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
49.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
49.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
48.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
48.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
48.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
48.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
48.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
47.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
47.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
47.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
47.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
47.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
47.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
46.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
46.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
46.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
46.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
46.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
45.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
45.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
44.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
44.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
44.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
43.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
43.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
43.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
43.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
43.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
42.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
42.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
42.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
42.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
41.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
41.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
41.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
40.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
40.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
40.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
40.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
39.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
38.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
37.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
37.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
37.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
37.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
37.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
36.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
36.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
36.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
36.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
36.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
35.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
35.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
35.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
35.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
35.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
34.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
34.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
34.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
33.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
33.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
33.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
33.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
33.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
33.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
32.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
32.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
32.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
32.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
31.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
31.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
31.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
31.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
31.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
31.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
31.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
30.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
30.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
29.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
29.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
28.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
27.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
27.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
26.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
25.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
22.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
19.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
16.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
16.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
1.0
CPT0011410003
Tumor
0.9
CPT0076330003
Tumor
0.9
CPT0012550003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0086820003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0088550004
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0002270011
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0092160003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0065750003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0078800003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0081600003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0079510001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0077140001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0009080003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0081620001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0069010001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0015810003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0015910003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0088900003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0077490003
Tumor
-0.5
CPT0025170003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0086950003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
