HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:54.3 nTPM
HPA Brain:50.2 nTPM
GTEx:54.3 nTPM
FANTOM5:70.2 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:82.7 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047489
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.2
Sample id Sample description nTPM
Hippocampus
nTPM: 47.1
1898 Male, age 80, left hemisphere 52.4
2529 Female, age 94, left hemisphere 50.3
1855 Male, age 76, left hemisphere 49.1
2148 Female, age 91, left hemisphere 46.8
2621 Female, age 67, right hemisphere 42.6
1911 Female, age 85, right hemisphere 41.4
Dentate gyrus
nTPM: 47.1
2010 Male, age 76, both hemispheres 52.6
2530 Female, age 94, left hemisphere 50.4
2528 Male, age 74, both hemispheres 48.0
2246 Female, age 85, both hemispheres 44.3
2531 Female, age 67, both hemispheres 43.9
1927 Female, age 91, both hemispheres 43.2
Entorhinal gyrus
nTPM: 47.5
2764 Male, age 80, right hemisphere 50.4
1787 Male, age 76, left hemisphere 49.0
1938 Female, age 85, left hemisphere 48.7
2117 Female, age 91, right hemisphere 46.7
2686 Male, age 75, right hemisphere 45.9
2613 Female, age 94, left hemisphere 44.3
Hippocampus, CA1
nTPM: 48.9
2749 Male, age 80, left hemisphere 58.1
2082 Female, age 91, right hemisphere 49.5
2045 Male, age 76, both hemispheres 45.8
2527 Male, age 74, both hemispheres 45.8
1873 Female, age 85, both hemispheres 45.2
Hippocampus, CA2
nTPM: 44.7
1940 Female, age 85, left hemisphere 46.1
1963 Male, age 80, left hemisphere 45.9
1892 Male, age 76, both hemispheres 45.0
2113 Female, age 91, right hemisphere 44.8
2437 Female, age 94, left hemisphere 44.5
2249 Male, age 74, both hemispheres 42.0
Hippocampus, CA3
nTPM: 45.6
2620 Female, age 94, left hemisphere 48.5
2137 Male, age 80, left hemisphere 47.5
2861 Female, age 67, both hemispheres 46.3
1867 Male, age 76, both hemispheres 45.3
2436 Male, age 74, both hemispheres 45.3
1891 Female, age 85, both hemispheres 40.7
Parahippocampal cortex
nTPM: 47.2
1933 Female, age 85, both hemispheres 51.6
1850 Male, age 80, both hemispheres 51.2
2018 Male, age 76, both hemispheres 50.0
2245 Female, age 91, both hemispheres 47.2
2532 Female, age 72, left hemisphere 46.8
2250 Female, age 67, right hemisphere 46.2
2692 Male, age 74, both hemispheres 45.9
2622 Female, age 67, right hemisphere 45.7
1990 Female, age 91, right hemisphere 44.3
2693 Female, age 94, both hemispheres 43.2
Perirhinal gyrus
nTPM: 50.2
1794 Male, age 80, right hemisphere 54.5
2521 Female, age 94, right hemisphere 53.1
1847 Female, age 91, left hemisphere 49.2
1841 Female, age 85, right hemisphere 48.5
2848 Male, age 76, right hemisphere 45.7
Subiculum
nTPM: 45.2
2042 Male, age 76, both hemispheres 53.4
2619 Male, age 74, both hemispheres 46.8
1977 Female, age 85, both hemispheres 45.7
2729 Female, age 91, right hemisphere 45.1
1901 Male, age 80, both hemispheres 44.0
2438 Female, age 94, left hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 54.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.3
Samples: 197

Max nTPM: 88.8
Min nTPM: 34.0
Std nTPM: 9.9
Median nTPM: 52.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 88.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 84.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 80.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 77.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 76.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 75.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 75.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 74.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 73.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 73.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 73.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 70.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.2
FF:10169-103B7 60 years, female 88.2
FF:10153-102I9 76 years, female 52.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.2
Pig sample Sample description nTPM
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 18.9
Min nTPM: 14.3
Sample A Female 18.9
Sample B Female 15.3
Sample C Male 16.5
Sample D Male 14.3
Dorsal hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 24.4
Min nTPM: 16.7
Sample A Female 24.4
Sample B Female 20.8
Sample C Male 19.0
Sample D Male 16.7
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 18.3
Sample C Male 16.0
Sample D Male 15.9
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.1
Sample A Female 16.8
Sample B Female 15.1
Sample C Male 21.3
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 82.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.5
Samples: 4

Max nTPM: 90.2
Min nTPM: 67.5
Sample A Male 76.3
Sample B Male 90.2
Sample C Female 84.1
Sample D Female 67.5
Hippocampal formation
nTPM: 82.7
Samples: 4

Max nTPM: 100.8
Min nTPM: 69.2
Sample A Male 100.8
Sample B Male 69.2
Sample C Female 73.5
Sample D Female 87.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
413802 Antisense, RP_040809_01_F01, Mouse strain C57BL/6J (56 days, male) 15.8

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