We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5IF is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
108.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
94.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
86.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
86.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
76.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
72.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
71.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
68.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
65.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
65.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
63.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
63.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
62.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
61.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
60.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
60.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
60.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
60.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
58.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
56.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
54.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
54.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
54.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
54.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
53.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
51.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
51.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
50.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
50.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
49.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
49.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
49.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
48.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
48.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
47.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
47.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
46.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
44.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
43.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
42.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
41.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
40.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
39.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
38.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
37.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
36.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
36.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
34.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
33.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
32.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
29.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
24.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
21.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
19.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5IF is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
215.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
203.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
182.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
174.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
173.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
172.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
165.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
160.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
142.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
140.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
135.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
128.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
125.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
124.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
122.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
119.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
114.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
114.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
112.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
109.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
108.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
105.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
104.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
104.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
101.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
99.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
97.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
96.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
95.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
95.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
94.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
93.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
92.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
91.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
89.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
87.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
87.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
87.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
87.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
86.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
86.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
84.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
84.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
84.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
83.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
82.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
82.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
81.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
81.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
81.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
80.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
80.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
79.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
79.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
78.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
78.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
78.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
78.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
77.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
76.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
75.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
75.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
75.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
74.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
74.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
74.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
74.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
73.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
70.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
69.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
69.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
69.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
68.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
67.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
67.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
67.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
67.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
67.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
67.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
66.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
66.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
66.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
66.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
66.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
66.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
65.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
65.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
65.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
65.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
64.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
64.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
64.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
63.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
63.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
63.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
62.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
62.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
62.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
61.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
61.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
60.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
60.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
60.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
60.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
58.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
58.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
58.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
58.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
58.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
58.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
58.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
57.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
57.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
57.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
57.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
57.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
56.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
56.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
56.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
56.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
55.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
55.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
55.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
55.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
55.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
55.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
55.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
54.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
54.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
54.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
54.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
54.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
54.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
54.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
54.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
54.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
54.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
53.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
53.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
53.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
52.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
52.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
52.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
52.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
52.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
52.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
52.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
51.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
51.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
51.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
51.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
51.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
51.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
51.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
51.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
50.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
50.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
50.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
50.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
50.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
50.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
49.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
49.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
49.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
49.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
49.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
49.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
49.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
49.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
49.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
49.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
48.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
48.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
48.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
48.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
48.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
48.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
48.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
48.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
48.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
48.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
48.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
47.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
47.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
47.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
47.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
47.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
47.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
46.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
46.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
46.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
46.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
46.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
46.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
45.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
45.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
45.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
45.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
45.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
45.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
45.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
45.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
45.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
45.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
45.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
44.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
44.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
44.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
44.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
44.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
44.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
44.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
44.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
44.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
44.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
43.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
43.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
43.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
43.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
43.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
43.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
43.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
43.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
43.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
43.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
42.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
42.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
42.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
42.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
42.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
42.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
42.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
42.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
42.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
42.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
42.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
41.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
41.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
41.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
41.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
41.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
41.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
41.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
41.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
41.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
41.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
41.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
41.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
40.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
40.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
40.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
40.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
40.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
40.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
40.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
40.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
39.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
39.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
39.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
39.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
39.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
39.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
39.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
39.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
39.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
39.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
38.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
38.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
38.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
38.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
38.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
38.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
38.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
38.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
38.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
38.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
37.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
37.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
37.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
37.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
37.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
37.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
37.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
37.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
37.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
37.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
37.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
37.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
36.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
36.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
36.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
36.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
36.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
36.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
36.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
36.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
36.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
36.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
36.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
36.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
36.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
35.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
35.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
35.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
35.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
34.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
34.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
34.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
34.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
34.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
34.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
34.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
34.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
34.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
34.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
34.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
34.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
33.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
33.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
33.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
33.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
33.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
33.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
33.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
32.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
32.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
32.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
32.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
32.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
32.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
32.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
32.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
32.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
32.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
31.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
31.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
31.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
31.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
31.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
31.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
31.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
31.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
31.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
31.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
30.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
30.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
30.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
30.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
30.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
30.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
30.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
30.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
30.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
30.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
30.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
30.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
29.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
29.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
29.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
29.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
29.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
29.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
29.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
29.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
28.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
28.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
28.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
26.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
26.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
26.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
26.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
26.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
25.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
24.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
23.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
23.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
23.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
22.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
22.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
22.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
16.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5IF is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
183.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
180.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
179.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
164.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
158.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
155.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
154.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
146.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
143.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
141.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
138.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
137.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
131.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
125.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
125.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
124.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
117.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
113.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
111.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
103.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
100.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
94.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
92.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
90.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
87.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
86.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
86.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
83.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
82.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
80.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
78.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
78.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
77.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
75.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
75.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
73.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
72.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
72.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
71.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
70.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
69.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
68.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
68.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
67.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
64.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
64.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
63.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
63.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
62.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
61.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
61.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
60.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
60.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
58.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
57.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
57.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
57.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
56.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
56.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
56.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
55.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
55.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
54.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
54.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
54.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
54.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
54.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
53.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
52.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
51.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
51.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
49.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
49.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
48.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
45.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
45.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
45.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
44.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
42.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
41.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
40.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
39.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
36.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
35.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
33.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB5IF is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
71.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
392.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
248.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
240.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
197.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
196.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
192.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
185.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
183.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
178.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
167.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
166.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
165.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
159.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
151.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
142.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
141.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
134.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
134.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
133.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
132.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
131.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
131.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
131.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
131.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
128.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
123.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
119.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
119.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
118.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
114.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
112.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
112.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
112.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
109.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
109.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
109.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
107.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
107.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
107.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
106.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
106.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
105.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
105.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
104.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
103.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
103.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
101.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
101.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
101.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
100.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
99.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
99.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
97.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
97.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
96.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
96.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
95.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
94.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
94.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
93.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
93.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
93.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
93.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
93.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
93.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
91.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
91.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
91.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
91.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
90.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
89.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
89.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
89.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
88.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
88.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
88.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
87.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
87.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
87.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
87.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
87.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
86.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
85.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
85.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
85.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
84.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
84.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
84.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
84.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
83.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
83.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
82.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
82.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
82.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
81.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
81.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
80.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
80.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
79.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
79.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
79.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
79.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
79.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
78.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
77.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
77.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
77.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
76.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
75.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
75.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
75.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
74.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
74.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
73.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
73.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
73.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
72.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
72.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
72.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
71.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
71.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
71.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
71.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
70.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
70.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
70.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
70.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
70.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
69.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
69.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
68.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
68.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
68.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
67.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
67.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
67.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
67.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
67.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
66.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
66.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
66.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
66.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
66.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
65.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
65.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
65.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
65.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
64.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
64.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
64.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
63.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
63.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
62.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
62.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
62.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
61.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
61.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
61.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
61.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
61.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
61.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
60.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
60.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
59.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
59.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
58.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
58.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
58.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
58.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
57.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
57.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
57.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
57.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
56.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
56.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
56.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
55.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
55.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
55.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
55.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
55.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
54.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
54.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
54.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
54.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
54.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
53.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
53.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
53.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
53.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
53.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
53.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
52.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
52.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
52.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
51.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
50.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
50.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
49.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
49.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
48.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
46.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
46.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
45.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
44.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
44.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
44.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
43.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
42.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
42.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
42.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
41.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
41.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
40.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
40.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
40.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
40.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
39.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
39.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
38.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
38.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
36.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
36.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
35.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
35.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
33.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
32.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
32.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
31.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
31.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
30.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
29.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
29.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
29.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
27.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
26.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
25.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
25.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
24.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
18.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
12.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
2.0
CPT0007320003
Tumor
1.2
CPT0001340003
Tumor
1.2
CPT0023350003
Tumor
1.1
CPT0078510003
Tumor
1.1
CPT0002350011
Tumor
1.0
CPT0002270011
Tumor
0.9
CPT0012280003
Tumor
0.9
CPT0075130003
Tumor
0.8
CPT0078800003
Tumor
0.8
CPT0012670003
Tumor
0.8
CPT0011410003
Tumor
0.8
CPT0081880003
Tumor
0.7
CPT0014160003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0079410003
Tumor
0.7
CPT0079380003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0076330003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0092740003
Normal
0.4
CPT0086030003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0010110003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0001260009
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0088710001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0089480003
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0001510001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0078840001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0077320001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0086870003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0065690003
Tumor
-0.3
CPT0069010001
Normal
-0.3
CPT0079270003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0081990003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0025920001
Normal
-0.3
CPT0023690003
Tumor
-0.3
CPT0000640003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0012290003
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0001220008
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0011240003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0025350003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0020020001
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0079480003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0007870001
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0065930003
Tumor
-0.6
CPT0012570003
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0006630003
Tumor
-0.7
CPT0018250001
Normal
-0.7
CPT0071150004
Tumor
-0.7
CPT0007860003
Tumor
-0.7
CPT0088970003
Tumor
-0.7
CPT0066470004
Tumor
-0.8
CPT0077490003
Tumor
-0.9
CPT0026410003
Tumor
-0.9
CPT0019990003
Tumor
-0.9
CPT0079180003
Tumor
-1.1
CPT0006440003
Tumor
-1.2
CPT0019130003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0012900004
Tumor
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0079000001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0019160001
Normal
N/A
CPT0010160003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0078990003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0000890001
Normal
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
