HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.4 nTPM
HPA Brain:14.2 nTPM
GTEx:24.4 nTPM
FANTOM5:11.1 Scaled Tags Per Million
Pig:2.5 nTPM
Mouse:1.0 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1898 Male, age 80, left hemisphere 13.0
2148 Female, age 91, left hemisphere 11.7
2529 Female, age 94, left hemisphere 11.2
2621 Female, age 67, right hemisphere 11.1
1911 Female, age 85, right hemisphere 10.4
1855 Male, age 76, left hemisphere 10.2
Dentate gyrus
nTPM: 12.3
2010 Male, age 76, both hemispheres 16.1
2528 Male, age 74, both hemispheres 13.5
1927 Female, age 91, both hemispheres 11.9
2530 Female, age 94, left hemisphere 11.8
2246 Female, age 85, both hemispheres 10.6
2531 Female, age 67, both hemispheres 10.2
Entorhinal gyrus
nTPM: 13.4
2686 Male, age 75, right hemisphere 14.4
1787 Male, age 76, left hemisphere 14.0
2764 Male, age 80, right hemisphere 13.8
2613 Female, age 94, left hemisphere 13.4
2117 Female, age 91, right hemisphere 13.2
1938 Female, age 85, left hemisphere 11.7
Hippocampus, CA1
nTPM: 12.3
1873 Female, age 85, both hemispheres 12.5
2082 Female, age 91, right hemisphere 12.5
2749 Male, age 80, left hemisphere 12.5
2527 Male, age 74, both hemispheres 12.1
2045 Male, age 76, both hemispheres 12.0
Hippocampus, CA2
nTPM: 13.1
1892 Male, age 76, both hemispheres 16.4
2249 Male, age 74, both hemispheres 14.9
1940 Female, age 85, left hemisphere 13.7
2113 Female, age 91, right hemisphere 11.7
1963 Male, age 80, left hemisphere 11.1
2437 Female, age 94, left hemisphere 10.8
Hippocampus, CA3
nTPM: 14.2
2436 Male, age 74, both hemispheres 18.9
1867 Male, age 76, both hemispheres 15.1
1891 Female, age 85, both hemispheres 14.6
2620 Female, age 94, left hemisphere 13.9
2137 Male, age 80, left hemisphere 12.4
2861 Female, age 67, both hemispheres 10.5
Parahippocampal cortex
nTPM: 14.0
1850 Male, age 80, both hemispheres 15.4
2532 Female, age 72, left hemisphere 15.4
2693 Female, age 94, both hemispheres 14.9
1990 Female, age 91, right hemisphere 14.3
2692 Male, age 74, both hemispheres 14.2
2622 Female, age 67, right hemisphere 14.1
2018 Male, age 76, both hemispheres 13.4
2250 Female, age 67, right hemisphere 13.4
1933 Female, age 85, both hemispheres 12.4
2245 Female, age 91, both hemispheres 12.3
Perirhinal gyrus
nTPM: 13.5
2848 Male, age 76, right hemisphere 15.0
1841 Female, age 85, right hemisphere 14.8
1794 Male, age 80, right hemisphere 13.4
1847 Female, age 91, left hemisphere 12.7
2521 Female, age 94, right hemisphere 11.5
Subiculum
nTPM: 13.9
2042 Male, age 76, both hemispheres 17.6
2619 Male, age 74, both hemispheres 14.9
1901 Male, age 80, both hemispheres 14.6
2729 Female, age 91, right hemisphere 13.0
1977 Female, age 85, both hemispheres 12.2
2438 Female, age 94, left hemisphere 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.4
Samples: 197

Max nTPM: 73.6
Min nTPM: 12.9
Std nTPM: 6.4
Median nTPM: 23.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 43.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 41.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 39.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 36.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 36.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 35.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 34.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.1
FF:10153-102I9 76 years, female 11.8
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2.5
Pig sample Sample description nTPM
Subiculum
nTPM: 2.0
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.6
Sample A Female 2.2
Sample B Female 2.0
Sample C Male 2.1
Sample D Male 1.6
Dorsal hippocampus
nTPM: 1.8
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 1.7
Sample C Male 1.9
Sample D Male 2.1
Entorhinal cortex
nTPM: 2.5
Samples: 4

Max nTPM: 2.7
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.4
Sample C Male 2.4
Sample D Male 2.7
Ventral hippocampus
nTPM: 1.8
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.3
Sample A Female 1.5
Sample B Female 2.1
Sample C Male 1.3
Sample D Male 2.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.4
Sample A Male 0.4
Sample B Male 1.2
Sample C Female 0.6
Sample D Female 0.5
Hippocampal formation
nTPM: 1.0
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.3
Sample A Male 1.0
Sample B Male 0.7
Sample C Female 0.3
Sample D Female 1.9

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