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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
66.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
59.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
58.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
57.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
55.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
55.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
55.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
52.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
50.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
49.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
48.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
47.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
45.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
44.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
44.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
43.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
41.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
40.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
39.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
39.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
38.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
38.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
37.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
37.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
37.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
37.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
37.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
35.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
35.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
32.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
31.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
31.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
30.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
29.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
27.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
17.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
3.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
2.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
209.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
131.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
109.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
95.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
95.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
95.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
92.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
90.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
89.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
87.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
87.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
86.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
85.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
84.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
84.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
84.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
83.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
82.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
81.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
81.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
81.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
81.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
80.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
80.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
80.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
80.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
79.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
79.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
79.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
78.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
78.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
78.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
78.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
77.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
77.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
77.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
77.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
77.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
76.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
76.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
76.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
75.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
75.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
75.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
74.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
74.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
74.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
74.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
74.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
74.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
73.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
73.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
73.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
73.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
73.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
73.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
73.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
73.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
73.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
73.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
73.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
72.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
72.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
71.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
71.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
71.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
71.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
71.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
71.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
71.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
70.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
70.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
70.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
69.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
69.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
69.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
69.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
69.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
69.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
69.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
69.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
69.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
69.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
68.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
68.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
68.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
68.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
68.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
68.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
67.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
67.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
67.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
67.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
67.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
67.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
67.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
67.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
67.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
67.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
67.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
67.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
67.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
67.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
67.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
67.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
66.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
66.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
66.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
66.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
66.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
66.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
66.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
66.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
66.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
66.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
66.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
66.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
66.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
65.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
65.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
65.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
65.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
65.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
65.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
65.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
65.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
65.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
65.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
65.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
65.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
65.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
64.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
64.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
64.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
64.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
64.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
64.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
64.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
64.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
64.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
64.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
63.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
63.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
63.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
63.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
63.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
63.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
63.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
63.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
63.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
62.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
62.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
62.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
62.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
62.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
62.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
62.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
62.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
62.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
62.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
62.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
61.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
61.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
61.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
61.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
61.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
61.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
60.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
60.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
60.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
60.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
60.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
60.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
60.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
60.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
60.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
60.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
60.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
59.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
59.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
59.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
59.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
59.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
59.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
59.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
59.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
59.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
58.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
58.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
58.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
58.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
58.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
58.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
58.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
58.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
58.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
58.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
58.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
58.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
58.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
57.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
57.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
57.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
57.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
57.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
57.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
57.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
57.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
57.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
57.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
57.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
57.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
57.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
57.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
57.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
57.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
57.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
57.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
56.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
56.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
56.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
56.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
56.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
56.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
56.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
56.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
56.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
56.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
56.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
56.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
55.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
55.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
55.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
55.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
55.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
55.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
55.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
55.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
55.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
55.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
55.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
55.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
55.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
54.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
54.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
54.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
54.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
54.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
54.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
54.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
54.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
54.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
53.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
53.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
53.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
53.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
53.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
53.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
53.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
53.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
53.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
53.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
53.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
53.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
52.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
52.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
52.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
52.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
52.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
52.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
52.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
52.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
52.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
52.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
52.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
52.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
52.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
52.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
52.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
52.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
51.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
51.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
51.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
51.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
51.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
51.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
51.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
51.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
51.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
51.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
51.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
51.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
51.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
51.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
51.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
50.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
50.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
50.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
50.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
50.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
49.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
49.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
49.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
49.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
49.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
49.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
49.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
49.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
49.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
48.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
48.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
48.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
48.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
48.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
48.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
48.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
48.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
48.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
48.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
48.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
48.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
47.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
47.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
47.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
47.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
47.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
47.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
47.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
47.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
47.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
47.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
47.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
47.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
47.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
47.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
47.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
47.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
47.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
46.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
46.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
46.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
46.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
46.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
46.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
46.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
46.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
46.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
45.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
45.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
45.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
45.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
45.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
45.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
45.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
45.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
45.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
44.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
44.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
44.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
44.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
44.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
44.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
44.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
44.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
44.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
44.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
44.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
44.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
43.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
43.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
43.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
43.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
43.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
43.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
42.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
42.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
42.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
42.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
42.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
42.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
42.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
42.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
42.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
42.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
41.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
41.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
41.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
41.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
41.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
40.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
40.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
40.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
40.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
40.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
40.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
39.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
39.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
39.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
39.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
39.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
39.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
39.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
38.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
38.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
38.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
38.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
38.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
37.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
37.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
37.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
37.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
37.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
36.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
36.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
36.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
36.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
36.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
36.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
36.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
35.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
35.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
35.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
35.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
35.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
35.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
35.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
35.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
35.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
35.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
35.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
35.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
35.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
35.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
34.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
34.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
34.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
34.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
33.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
33.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
32.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
32.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
31.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
31.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
31.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
31.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
31.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
31.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
30.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
30.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
29.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
29.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
29.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
29.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
28.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
27.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
27.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
26.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
26.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
26.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
25.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
25.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
24.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
23.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
20.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
19.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
102.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
98.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
96.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
95.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
92.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
92.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
88.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
87.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
86.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
85.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
83.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
82.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
81.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
80.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
80.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
80.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
79.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
79.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
78.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
77.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
77.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
76.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
75.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
75.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
75.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
75.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
73.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
72.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
72.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
72.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
71.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
70.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
70.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
69.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
69.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
68.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
68.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
68.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
68.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
68.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
66.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
66.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
65.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
65.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
65.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
65.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
64.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
64.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
63.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
63.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
63.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
62.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
62.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
61.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
61.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
59.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
59.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
58.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
56.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
56.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
55.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
55.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
55.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
54.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
54.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
53.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
53.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
53.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
53.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
51.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
51.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
48.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
48.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
46.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
45.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
43.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
43.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
42.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
42.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
41.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
41.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
40.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
39.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
38.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
38.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
35.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
33.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
26.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
97.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
90.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
86.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
85.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
83.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
80.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
79.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
79.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
78.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
76.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
76.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
75.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
75.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
74.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
74.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
71.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
71.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
71.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
71.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
71.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
70.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
69.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
69.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
69.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
68.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
68.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
68.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
68.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
68.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
68.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
68.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
67.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
67.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
67.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
67.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
66.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
65.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
65.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
65.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
65.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
64.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
64.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
64.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
64.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
63.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
63.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
63.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
63.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
63.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
62.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
62.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
62.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
61.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
61.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
60.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
60.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
60.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
60.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
59.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
59.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
58.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
58.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
58.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
57.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
57.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
56.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
56.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
56.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
55.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
55.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
55.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
55.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
55.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
55.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
55.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
54.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
54.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
54.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
54.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
54.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
54.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
53.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
53.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
53.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
53.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
52.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
52.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
52.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
52.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
52.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
51.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
51.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
51.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
51.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
51.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
51.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
51.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
51.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
51.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
50.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
50.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
50.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
50.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
50.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
49.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
49.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
49.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
49.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
48.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
48.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
48.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
48.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
47.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
47.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
47.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
47.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
47.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
47.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
46.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
46.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
46.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
46.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
45.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
45.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
45.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
45.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
44.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
44.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
44.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
44.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
43.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
43.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
43.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
42.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
42.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
42.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
42.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
42.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
41.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
41.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
41.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
41.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
40.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
40.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
40.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
39.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
39.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
38.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
38.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
38.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
38.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
38.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
38.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
38.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
37.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
37.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
37.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
36.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
36.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
36.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
35.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
34.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
34.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
33.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
33.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
32.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
32.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
31.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
31.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
30.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
30.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
27.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
27.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
27.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
21.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
16.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
13.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
12.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
10.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
9.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
4.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
4.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
2.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
2.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
1.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
1.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012550003
Tumor
0.7
CPT0021240003
Tumor
0.6
CPT0088970003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0076330003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0001500009
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0001180009
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0086360003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0078530001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0012370003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0026420001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0009020003
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0009060003
Tumor
-0.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
