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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPM1A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
118.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
113.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
103.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
99.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
96.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
88.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
79.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
78.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
77.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
76.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
75.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
75.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
74.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
73.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
64.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
64.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
59.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
57.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
57.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
53.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
52.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
47.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
47.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
45.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
45.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
45.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
42.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
40.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
40.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
38.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
35.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
34.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
33.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
32.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
32.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
31.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
31.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
30.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
29.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
25.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
23.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
14.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPM1A is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
90.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
78.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
75.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
70.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
63.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
60.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
54.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
52.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
50.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
49.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
49.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
49.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
48.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
47.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
46.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
45.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
42.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
41.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
41.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
40.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
40.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
40.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
39.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
38.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
37.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
37.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
37.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
37.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
37.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
36.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
36.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
35.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
34.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
34.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
34.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
33.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
33.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
32.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
32.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
32.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
32.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
32.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
32.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
31.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
31.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
31.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
30.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
29.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
29.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
29.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
29.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
29.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
29.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
28.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
28.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
27.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
27.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
27.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
27.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
25.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
25.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
25.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
25.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
25.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
25.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
25.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
25.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
24.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
24.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
23.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
23.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
23.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
23.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
23.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
22.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
22.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
21.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
21.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
21.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
21.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
21.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
21.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
20.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
19.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
18.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
17.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
16.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPM1A is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
67.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
46.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
41.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
40.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
40.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
39.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
39.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
39.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
39.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
39.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
39.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
37.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
37.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
35.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
33.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
33.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
30.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
27.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
27.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
26.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
26.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
24.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
22.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
21.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
19.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
18.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
14.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
13.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPM1A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
69.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
67.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
66.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
51.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
50.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
49.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
46.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
42.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
42.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
40.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
40.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
40.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
40.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
39.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
37.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
37.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
35.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
35.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
35.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
34.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
34.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
34.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
33.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
33.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
32.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
31.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
30.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
30.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
29.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
29.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
29.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
26.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
25.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
25.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
24.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
24.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
23.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
18.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
18.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
18.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
18.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
17.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
16.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
15.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
12.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
11.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
8.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
3.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
1.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.2
CPT0079180003
Tumor
1.0
CPT0006950001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0088920001
Normal
0.5
CPT0089480003
Normal
0.5
CPT0087050003
Normal
0.5
CPT0092740003
Normal
0.5
CPT0066430001
Normal
0.5
CPT0023710001
Normal
0.4
CPT0092310003
Normal
0.4
CPT0092800003
Normal
0.4
CPT0014350001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0078840001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0078530001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0020020001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0026420001
Normal
0.4
CPT0086370003
Normal
0.3
CPT0000790001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0078800003
Tumor
0.3
CPT0000890001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0079430001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0012090003
Normal
0.3
CPT0063640001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0020130001
Normal
0.3
CPT0082010001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0001550001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0024680001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0001510001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0066520001
Normal
0.2
CPT0001230001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0025920001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0079270003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0075170001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0025110003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0066470004
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0087040003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0092790003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0065690003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0075560003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0012670003
Tumor
-0.5
CPT0085670003
Tumor
-0.6
CPT0001180009
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0084560003
Tumor
-0.6
CPT0069160003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0063630003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0017410003
Tumor
-0.7
CPT0001340003
Tumor
-0.8
CPT0079410003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
