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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNIH1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
132.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
88.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
88.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
85.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
83.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
79.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
76.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
72.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
72.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
72.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
71.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
71.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
70.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
65.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
65.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
64.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
63.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
59.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
57.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
57.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
55.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
55.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
54.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
54.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
53.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
53.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
52.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
52.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
52.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
52.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
52.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
50.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
49.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
49.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
47.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
45.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
43.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
43.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
39.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
39.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
38.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
37.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
36.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
35.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
35.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
34.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
34.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
33.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
32.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
32.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
30.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
29.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
28.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
24.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNIH1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
248.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
206.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
200.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
188.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
173.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
165.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
160.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
151.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
150.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
142.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
135.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
133.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
131.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
125.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
122.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
119.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
119.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
119.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
118.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
117.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
117.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
116.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
115.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
115.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
114.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
114.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
114.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
114.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
112.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
112.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
112.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
112.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
111.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
111.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
111.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
111.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
110.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
110.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
109.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
107.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
106.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
105.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
105.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
105.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
105.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
103.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
103.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
102.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
102.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
102.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
101.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
100.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
99.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
99.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
99.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
99.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
99.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
99.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
98.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
98.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
98.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
98.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
98.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
97.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
97.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
97.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
95.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
95.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
95.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
95.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
94.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
94.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
94.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
93.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
93.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
93.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
93.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
92.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
92.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
92.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
92.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
92.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
91.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
91.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
91.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
91.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
91.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
91.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
90.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
90.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
90.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
90.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
89.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
89.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
89.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
88.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
88.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
88.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
88.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
88.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
88.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
88.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
87.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
87.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
87.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
87.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
87.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
87.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
87.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
87.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
86.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
86.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
86.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
86.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
86.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
86.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
86.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
85.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
85.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
85.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
85.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
84.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
84.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
84.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
84.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
84.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
84.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
84.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
83.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
83.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
83.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
83.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
83.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
83.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
83.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
82.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
82.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
81.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
81.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
81.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
81.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
80.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
80.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
80.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
80.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
79.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
79.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
79.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
79.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
79.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
78.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
77.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
77.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
77.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
77.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
77.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
77.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
77.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
76.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
76.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
76.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
76.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
76.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
76.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
76.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
76.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
76.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
76.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
76.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
76.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
75.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
75.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
75.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
75.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
75.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
75.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
75.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
75.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
75.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
74.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
74.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
74.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
74.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
74.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
74.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
74.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
73.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
73.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
73.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
72.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
72.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
72.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
72.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
72.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
72.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
72.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
72.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
72.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
72.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
72.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
72.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
72.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
71.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
71.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
71.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
71.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
71.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
71.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
71.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
71.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
71.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
71.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
71.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
71.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
71.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
70.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
70.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
70.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
70.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
70.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
69.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
69.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
69.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
69.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
69.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
69.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
68.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
68.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
68.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
68.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
68.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
67.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
67.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
67.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
67.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
67.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
66.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
66.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
66.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
66.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
66.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
66.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
66.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
66.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
66.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
65.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
65.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
65.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
65.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
65.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
64.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
64.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
64.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
64.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
64.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
64.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
63.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
63.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
63.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
63.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
63.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
63.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
62.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
62.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
62.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
62.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
62.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
61.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
61.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
61.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
61.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
61.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
61.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
61.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
61.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
61.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
61.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
60.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
60.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
60.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
60.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
60.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
60.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
59.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
59.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
59.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
59.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
59.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
59.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
59.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
59.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
58.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
58.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
58.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
58.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
58.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
58.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
58.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
58.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
58.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
58.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
57.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
57.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
57.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
57.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
57.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
56.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
56.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
56.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
55.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
55.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
55.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
55.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
55.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
55.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
55.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
55.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
55.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
55.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
54.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
54.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
54.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
53.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
53.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
53.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
53.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
53.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
53.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
52.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
52.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
52.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
52.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
51.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
51.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
51.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
51.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
51.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
51.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
51.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
51.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
51.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
50.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
50.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
50.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
50.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
50.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
50.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
50.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
49.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
49.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
49.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
49.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
48.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
48.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
48.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
48.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
48.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
47.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
47.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
47.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
47.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
46.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
46.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
46.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
46.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
46.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
46.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
45.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
45.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
45.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
45.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
44.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
44.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
44.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
44.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
43.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
43.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
43.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
43.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
42.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
42.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
42.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
42.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
41.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
41.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
40.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
40.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
39.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
39.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
39.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
38.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
38.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
38.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
38.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
38.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
38.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
37.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
37.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
37.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
36.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
35.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
35.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
35.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
35.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
35.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
35.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
34.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
34.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
34.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
34.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
34.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
33.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
33.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
32.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
32.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
31.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
31.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
30.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
30.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
30.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
30.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
30.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
29.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
28.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
28.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
28.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
28.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
26.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
26.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
26.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
26.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
25.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
24.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
23.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
23.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
19.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
19.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNIH1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
74.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
149.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
148.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
138.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
125.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
123.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
119.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
116.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
115.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
110.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
109.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
109.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
106.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
105.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
105.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
104.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
103.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
102.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
102.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
101.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
100.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
99.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
96.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
93.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
92.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
92.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
89.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
88.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
87.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
87.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
86.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
86.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
85.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
85.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
85.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
83.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
82.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
81.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
80.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
80.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
80.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
79.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
79.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
78.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
77.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
77.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
77.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
77.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
76.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
76.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
76.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
75.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
75.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
73.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
72.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
72.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
72.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
71.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
70.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
70.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
69.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
69.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
68.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
66.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
65.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
65.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
63.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
61.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
59.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
59.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
57.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
55.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
55.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
54.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
53.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
52.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
49.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
49.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
47.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
46.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
42.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
42.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
42.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
40.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
39.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
38.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
38.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
37.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
36.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
34.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
33.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNIH1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
160.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
134.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
120.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
111.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
109.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
105.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
105.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
101.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
101.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
92.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
90.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
90.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
88.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
88.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
84.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
83.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
83.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
82.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
81.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
81.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
79.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
77.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
77.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
77.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
76.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
76.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
75.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
75.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
74.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
73.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
73.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
72.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
71.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
71.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
71.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
71.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
70.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
70.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
69.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
69.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
69.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
68.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
67.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
67.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
66.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
65.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
65.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
65.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
64.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
64.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
63.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
63.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
61.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
60.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
60.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
60.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
60.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
60.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
59.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
59.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
59.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
59.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
58.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
58.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
57.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
57.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
57.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
57.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
55.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
55.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
55.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
54.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
54.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
54.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
54.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
54.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
53.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
51.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
51.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
51.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
51.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
51.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
51.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
50.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
50.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
50.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
50.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
50.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
49.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
49.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
49.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
49.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
49.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
49.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
48.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
48.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
47.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
47.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
47.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
46.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
46.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
46.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
46.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
46.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
45.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
45.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
44.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
44.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
44.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
43.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
43.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
43.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
42.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
42.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
42.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
42.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
42.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
41.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
41.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
41.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
41.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
40.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
40.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
40.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
40.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
40.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
39.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
39.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
39.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
39.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
39.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
39.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
39.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
38.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
38.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
38.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
38.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
38.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
37.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
37.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
36.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
36.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
36.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
36.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
35.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
34.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
34.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
34.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
33.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
33.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
33.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
32.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
32.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
32.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
32.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
32.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
31.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
31.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
31.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
30.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
29.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
29.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
29.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
28.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
28.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
28.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
27.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
27.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
26.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
26.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
26.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
25.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
25.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
25.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
24.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
23.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
22.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
22.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
22.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
22.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
22.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
22.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
21.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
21.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
20.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
16.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
11.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
5.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
2.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
