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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
75.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
73.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
68.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
65.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
63.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
61.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
58.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
57.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
53.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
52.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
50.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
50.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
50.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
48.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
46.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
42.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
42.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
42.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
41.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
40.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
39.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
39.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
37.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
36.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
35.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
35.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
35.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
35.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
34.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
34.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
33.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
32.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
31.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
29.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
29.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
28.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
28.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
27.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
27.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
25.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
23.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
15.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
8.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC6 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
151.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
128.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
94.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
87.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
86.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
85.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
81.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
81.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
76.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
75.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
75.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
73.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
72.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
72.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
70.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
69.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
69.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
69.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
69.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
69.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
69.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
68.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
68.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
68.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
68.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
67.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
67.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
66.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
65.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
65.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
64.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
64.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
64.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
63.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
63.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
63.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
63.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
63.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
63.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
63.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
63.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
62.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
62.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
62.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
62.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
62.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
61.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
61.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
60.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
60.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
60.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
60.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
59.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
59.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
59.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
58.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
58.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
58.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
58.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
57.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
57.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
57.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
57.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
57.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
57.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
57.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
57.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
56.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
56.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
56.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
56.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
56.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
56.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
56.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
56.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
56.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
56.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
56.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
55.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
55.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
55.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
55.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
55.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
55.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
54.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
54.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
54.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
54.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
54.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
54.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
54.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
54.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
54.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
54.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
54.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
54.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
54.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
54.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
54.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
54.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
54.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
53.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
53.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
53.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
53.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
53.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
53.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
53.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
53.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
53.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
53.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
53.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
53.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
53.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
53.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
53.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
53.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
53.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
53.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
52.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
52.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
52.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
52.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
52.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
52.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
52.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
52.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
52.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
52.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
51.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
51.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
51.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
51.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
51.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
51.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
51.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
51.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
51.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
50.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
50.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
50.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
50.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
50.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
50.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
50.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
50.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
50.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
50.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
50.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
50.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
50.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
49.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
49.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
49.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
49.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
49.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
49.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
49.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
49.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
48.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
48.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
48.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
48.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
48.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
48.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
48.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
48.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
48.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
48.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
48.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
48.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
48.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
48.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
47.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
47.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
47.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
47.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
47.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
47.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
47.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
47.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
47.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
46.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
46.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
46.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
46.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
46.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
46.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
46.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
46.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
46.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
46.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
46.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
46.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
46.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
46.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
46.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
45.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
45.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
45.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
45.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
45.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
45.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
45.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
45.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
45.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
45.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
45.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
45.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
45.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
45.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
44.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
44.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
44.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
44.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
44.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
44.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
44.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
44.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
44.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
44.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
44.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
44.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
44.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
44.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
44.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
44.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
44.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
43.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
43.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
43.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
43.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
43.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
42.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
42.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
42.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
42.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
42.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
42.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
42.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
42.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
42.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
42.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
42.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
42.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
42.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
42.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
41.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
41.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
41.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
41.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
41.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
41.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
41.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
41.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
40.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
40.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
40.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
40.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
40.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
40.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
39.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
39.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
39.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
39.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
39.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
39.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
39.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
38.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
38.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
38.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
38.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
38.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
38.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
38.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
38.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
38.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
38.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
38.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
38.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
38.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
37.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
37.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
37.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
37.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
37.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
37.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
37.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
37.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
37.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
37.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
37.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
37.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
37.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
37.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
37.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
36.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
36.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
36.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
36.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
36.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
36.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
35.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
35.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
35.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
35.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
35.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
35.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
35.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
35.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
35.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
35.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
35.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
34.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
34.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
34.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
34.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
34.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
34.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
34.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
34.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
34.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
34.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
33.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
33.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
33.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
33.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
33.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
33.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
33.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
33.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
33.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
32.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
32.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
32.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
32.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
32.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
32.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
32.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
31.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
31.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
31.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
30.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
30.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
30.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
30.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
30.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
29.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
29.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
29.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
29.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
28.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
28.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
28.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
28.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
28.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
28.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
27.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
27.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
26.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
26.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
26.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
26.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
25.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
25.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
25.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
25.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
24.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
24.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
24.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
22.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
22.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
21.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
21.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
20.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
20.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
19.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
18.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
99.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
86.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
85.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
80.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
70.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
69.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
69.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
68.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
68.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
66.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
65.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
65.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
65.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
64.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
64.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
63.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
62.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
61.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
60.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
60.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
60.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
59.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
59.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
58.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
58.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
58.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
57.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
57.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
56.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
55.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
55.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
55.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
54.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
54.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
54.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
53.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
52.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
51.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
51.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
50.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
50.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
49.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
49.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
48.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
47.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
47.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
47.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
47.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
47.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
45.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
45.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
44.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
43.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
43.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
42.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
42.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
42.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
41.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
40.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
39.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
39.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
38.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
38.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
37.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
36.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
36.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
35.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
32.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
32.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
32.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
32.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
30.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
30.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
28.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
22.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMC6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
76.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
75.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
66.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
65.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
60.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
60.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
56.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
56.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
52.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
50.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
49.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
48.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
48.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
48.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
47.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
47.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
47.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
47.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
46.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
46.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
46.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
46.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
46.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
45.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
45.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
45.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
45.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
45.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
45.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
45.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
45.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
45.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
44.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
44.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
44.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
44.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
44.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
44.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
44.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
43.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
42.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
42.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
41.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
41.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
41.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
41.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
41.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
41.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
40.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
40.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
40.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
40.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
40.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
40.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
39.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
39.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
39.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
39.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
39.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
39.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
38.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
38.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
38.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
37.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
37.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
37.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
37.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
36.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
36.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
36.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
36.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
35.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
35.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
35.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
35.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
35.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
35.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
35.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
34.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
34.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
34.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
34.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
34.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
33.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
33.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
33.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
33.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
32.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
32.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
31.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
31.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
31.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
31.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
30.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
30.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
30.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
30.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
30.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
30.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
30.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
29.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
29.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
29.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
29.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
28.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
28.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
28.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
28.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
28.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
27.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
27.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
27.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
26.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
26.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
26.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
26.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
25.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
25.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
25.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
25.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
25.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
24.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
24.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
24.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
23.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
22.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
22.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
21.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
17.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
16.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
16.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
15.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
14.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
14.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
13.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
13.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
11.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
10.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
9.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
5.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012550003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0002350011
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0002270011
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0081880003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0088690003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0017450001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0079510001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0023360001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0007320003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
