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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDR39U1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
83.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
144.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
141.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
135.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
130.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
129.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
126.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
124.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
119.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
118.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
114.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
112.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
111.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
111.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
111.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
109.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
102.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
102.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
101.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
99.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
95.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
94.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
93.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
93.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
91.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
91.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
90.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
89.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
85.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
85.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
83.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
82.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
81.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
79.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
77.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
77.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
75.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
75.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
75.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
75.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
74.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
74.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
74.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
70.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
69.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
67.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
67.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
64.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
63.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
62.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
61.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
61.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
58.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
57.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
55.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
54.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
50.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
47.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
45.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
42.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
41.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
41.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
33.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDR39U1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
77.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
73.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
65.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
60.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
58.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
57.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
55.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
55.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
54.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
53.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
52.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
52.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
48.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
47.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
47.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
46.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
46.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
45.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
45.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
45.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
45.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
44.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
44.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
44.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
43.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
43.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
43.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
42.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
42.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
42.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
42.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
41.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
41.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
41.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
41.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
41.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
40.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
40.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
40.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
39.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
39.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
39.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
38.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
38.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
38.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
38.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
38.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
37.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
37.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
37.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
37.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
37.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
37.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
37.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
37.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
36.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
36.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
36.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
36.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
35.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
35.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
35.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
35.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
35.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
35.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
34.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
34.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
34.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
34.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
34.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
34.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
34.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
33.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
33.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
33.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
33.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
33.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
33.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
33.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
32.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
32.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
32.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
32.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
32.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
32.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
32.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
32.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
32.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
32.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
31.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
31.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
31.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
31.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
30.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
30.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
30.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
30.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
30.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
30.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
29.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
29.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
29.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
29.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
28.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
28.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
28.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
28.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
28.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
28.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
28.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
28.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
28.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
28.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
27.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
27.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
27.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
27.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
27.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
27.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
27.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
27.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
26.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
26.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
26.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
26.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
26.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
26.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
26.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
26.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
26.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
26.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
25.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
25.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
25.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
25.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
25.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
25.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
25.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
24.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
24.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
24.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
24.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
24.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
24.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
24.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
23.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
22.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
22.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
22.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
21.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
21.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
21.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
21.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
21.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
21.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
20.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
20.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
20.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
20.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
19.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
19.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
18.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
18.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
17.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
16.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
16.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
15.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
10.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDR39U1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
39.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
37.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
36.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
34.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
33.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
32.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
32.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
32.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
31.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
31.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
31.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
30.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
30.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
28.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
26.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
25.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
24.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
24.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
23.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
22.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
22.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
22.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
19.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
17.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
15.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SDR39U1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
154.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
117.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
112.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
103.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
99.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
88.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
88.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
83.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
83.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
79.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
78.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
78.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
76.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
75.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
74.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
72.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
69.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
69.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
69.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
64.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
64.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
64.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
64.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
63.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
63.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
62.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
62.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
62.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
61.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
61.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
60.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
60.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
60.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
60.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
59.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
59.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
59.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
58.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
58.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
58.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
58.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
58.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
57.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
57.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
57.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
57.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
56.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
56.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
56.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
56.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
56.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
55.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
55.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
55.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
55.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
55.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
54.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
54.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
53.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
53.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
52.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
52.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
51.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
51.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
51.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
51.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
51.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
50.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
50.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
49.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
49.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
49.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
49.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
49.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
49.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
49.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
48.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
47.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
47.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
47.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
46.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
46.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
46.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
46.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
46.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
46.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
45.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
44.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
44.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
44.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
44.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
44.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
44.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
44.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
44.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
44.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
43.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
43.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
43.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
43.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
43.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
42.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
42.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
42.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
42.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
42.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
42.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
42.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
42.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
41.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
41.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
41.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
41.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
41.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
40.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
40.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
40.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
40.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
40.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
40.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
40.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
40.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
39.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
39.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
39.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
39.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
39.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
39.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
39.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
39.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
39.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
39.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
39.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
38.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
38.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
38.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
38.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
38.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
38.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
38.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
37.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
37.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
37.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
37.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
37.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
37.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
37.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
36.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
36.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
36.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
35.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
35.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
35.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
35.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
35.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
35.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
35.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
35.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
35.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
34.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
34.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
34.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
33.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
33.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
33.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
33.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
33.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
32.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
32.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
32.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
32.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
32.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
32.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
32.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
32.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
32.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
32.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
31.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
31.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
31.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
31.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
31.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
31.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
31.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
30.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
30.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
30.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
30.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
30.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
29.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
29.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
29.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
29.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
28.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
28.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
28.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
28.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
28.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
27.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
27.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
26.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
26.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
25.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
24.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
24.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
24.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
23.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
23.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
22.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
16.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
1.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.6
CPT0079180003
Tumor
1.2
CPT0012770003
Normal
1.0
CPT0009080003
Normal
1.0
CPT0078670001
Normal
0.9
CPT0088500001
Normal
0.9
CPT0025610001
Normal
0.8
CPT0078940001
Normal
0.8
CPT0086370003
Normal
0.8
CPT0092800003
Normal
0.8
CPT0066430001
Normal
0.7
CPT0002270011
Tumor
0.7
CPT0006950001
Normal
0.7
CPT0079000001
Normal
0.7
CPT0089480003
Normal
0.7
CPT0078840001
Normal
0.7
CPT0020130001
Normal
0.7
CPT0065450001
Normal
0.7
CPT0007470001
Normal
0.7
CPT0088640003
Normal
0.7
CPT0000790001
Normal
0.7
CPT0079430001
Normal
0.7
CPT0014350001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0010170001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0001510001
Normal
0.6
CPT0012090003
Normal
0.6
CPT0009020003
Normal
0.6
CPT0012570003
Normal
0.6
CPT0092740003
Normal
0.6
CPT0001230001
Normal
0.6
CPT0007870001
Normal
0.6
CPT0026420001
Normal
0.6
CPT0020020001
Normal
0.6
CPT0077140001
Normal
0.6
CPT0086830003
Normal
0.6
CPT0082010001
Normal
0.6
CPT0086890003
Normal
0.6
CPT0081620001
Normal
0.5
CPT0012640003
Normal
0.5
CPT0025060001
Normal
0.5
CPT0088920001
Normal
0.5
CPT0063640001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0012290003
Normal
0.5
CPT0092310003
Normal
0.5
CPT0002370001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0064400001
Normal
0.5
CPT0024680001
Normal
0.5
CPT0013790003
Normal
0.5
CPT0018250001
Normal
0.5
CPT0023710001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0012920003
Normal
0.4
CPT0014130001
Normal
0.4
CPT0092290003
Tumor
0.4
CPT0000660001
Normal
0.4
CPT0076350001
Normal
0.3
CPT0088570001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0088970003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0066520001
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0078530001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0007860003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0014160003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0019990003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0007320003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0089020003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0087040003
Tumor
-0.4
CPT0001270001
Normal
-0.4
CPT0014370004
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0077310003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0026410003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0009060003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0088630003
Tumor
-0.5
CPT0069000003
Tumor
-0.5
CPT0000780007
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0006630003
Tumor
-0.6
CPT0076330003
Tumor
-0.6
CPT0081990003
Tumor
-0.6
CPT0010160003
Tumor
-0.6
CPT0075720003
Tumor
-0.6
CPT0078930003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0063320003
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0079270003
Tumor
-0.6
CPT0078990003
Tumor
-0.7
CPT0024670003
Tumor
-0.7
CPT0079480003
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0089460004
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0088550004
Tumor
-0.7
CPT0011410003
Tumor
-0.7
CPT0012080003
Tumor
-0.7
CPT0075560003
Tumor
-0.7
CPT0065870003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0092730003
Tumor
-0.8
CPT0023350003
Tumor
-0.8
CPT0006900003
Tumor
-0.8
CPT0088480003
Tumor
-0.8
CPT0065810003
Tumor
-0.8
CPT0000640003
Tumor
-0.8
CPT0023690003
Tumor
-0.8
CPT0075130003
Tumor
-0.8
CPT0071150004
Tumor
-0.8
CPT0025580004
Tumor
-0.8
CPT0012550003
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0086950003
Tumor
-0.9
CPT0010110003
Tumor
-0.9
CPT0078830003
Tumor
-0.9
CPT0001540009
Tumor
-0.9
CPT0025050003
Tumor
-0.9
CPT0079410003
Tumor
-0.9
CPT0001220008
Tumor
-0.9
CPT0021240003
Tumor
-0.9
CPT0081600003
Tumor
-0.9
CPT0025290003
Tumor
-0.9
CPT0085670003
Tumor
-1.0
CPT0001260009
Tumor
-1.0
CPT0065930003
Tumor
-1.0
CPT0009000003
Tumor
-1.0
CPT0077110003
Tumor
-1.0
CPT0012670003
Tumor
-1.0
CPT0015910003
Tumor
-1.0
CPT0088760003
Tumor
-1.0
CPT0086360003
Tumor
-1.1
CPT0079380003
Tumor
-1.1
CPT0065430003
Tumor
-1.1
CPT0015810003
Tumor
-1.1
CPT0092790003
Tumor
-1.1
CPT0063630003
Tumor
-1.1
CPT0012370003
Tumor
-1.1
CPT0019130003
Tumor
-1.1
CPT0002350011
Tumor
-1.1
CPT0025230003
Tumor
-1.2
CPT0001180009
Tumor
-1.2
CPT0079230003
Tumor
-1.2
CPT0017850003
Tumor
-1.2
CPT0084560003
Tumor
-1.2
CPT0065690003
Tumor
-1.3
CPT0088690003
Tumor
-1.3
CPT0017410003
Tumor
-1.3
CPT0077490003
Tumor
-1.3
CPT0025350003
Tumor
-1.5
CPT0001340003
Tumor
-1.7
CPT0081880003
Tumor
-1.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
