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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DESI1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
65.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
58.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
46.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
42.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
39.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
38.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
36.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
34.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
33.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
32.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
30.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
30.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
30.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
30.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
28.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
28.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
26.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
23.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
18.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
18.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
17.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
17.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
15.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
14.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DESI1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
38.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
34.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
28.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
28.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
26.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
25.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
24.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
23.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
23.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
19.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
18.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
17.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
16.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
16.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
15.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
15.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
15.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
14.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
13.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
13.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
12.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
12.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
12.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
11.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
11.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
11.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
10.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
10.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
9.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
8.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
8.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
7.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
7.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
6.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DESI1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
32.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
21.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
17.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
17.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
14.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
12.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
11.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
10.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
10.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
10.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
9.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
9.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DESI1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
59.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
51.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
50.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
47.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
39.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
38.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
38.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
36.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
36.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
35.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
35.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
34.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
33.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
33.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
32.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
31.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
30.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
30.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
28.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
28.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
27.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
26.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
26.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
26.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
25.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
25.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
24.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
24.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
23.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
22.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
21.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
21.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
21.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
21.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
21.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
21.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
20.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
20.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
20.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
19.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
19.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
18.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
18.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
18.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
18.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
18.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
18.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
17.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
17.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
16.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
15.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
15.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
14.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
14.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
12.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
12.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
11.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
9.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
0.7
CPT0076330003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0001540009
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0077310003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0084560003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0017410003
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0012550003
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0010170001
Normal
0.3
CPT0092790003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0087040003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0088550004
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0079300001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0017450001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0007470001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0065930003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0075570001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0088780001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0025290003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0086950003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0065870003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0086870003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0007320003
Tumor
-0.7
CPT0007870001
Normal
-0.8
CPT0088760003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
