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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGSM3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
79.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
74.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
52.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
48.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
47.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
47.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
46.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
43.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
43.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
43.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
43.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
42.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
41.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
40.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
39.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
37.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
36.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
36.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
35.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
35.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
34.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
34.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
34.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
33.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
33.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
33.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
33.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
32.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
30.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
29.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
27.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
25.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
23.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
20.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
17.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGSM3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
36.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
33.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
30.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
30.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
29.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
29.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
29.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
28.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
27.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
27.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
26.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
26.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
26.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
25.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
25.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
24.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
24.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
24.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
23.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
23.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
23.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
23.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
22.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
22.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
22.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
22.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
21.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
21.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
21.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
20.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
20.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
20.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
20.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
20.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
19.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
19.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
19.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
19.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
18.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
17.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
17.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
17.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
17.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
16.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
14.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
14.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
14.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
13.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGSM3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
30.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
29.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
28.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
28.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
27.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
26.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
26.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
25.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
24.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
24.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
23.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
23.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
23.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
22.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
21.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
21.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
18.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
18.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
11.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SGSM3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
64.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
62.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
51.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
50.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
49.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
43.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
41.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
41.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
41.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
40.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
39.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
38.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
38.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
36.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
35.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
35.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
34.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
34.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
32.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
32.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
31.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
31.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
31.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
31.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
31.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
30.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
30.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
29.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
29.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
29.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
29.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
29.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
28.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
27.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
27.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
26.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
26.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
26.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
26.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
25.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
25.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
24.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
24.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
23.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
23.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
23.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
23.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
23.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
22.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
22.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
22.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
22.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
22.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
22.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
21.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
21.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
21.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
21.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
21.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
21.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
20.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
20.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
19.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
19.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
19.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
18.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
18.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
17.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
16.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
16.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
16.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
14.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
12.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
6.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065930003
Tumor
1.7
CPT0065690003
Tumor
1.2
CPT0066470004
Tumor
1.1
CPT0075720003
Tumor
1.0
CPT0025110003
Tumor
1.0
CPT0086030003
Tumor
0.9
CPT0019990003
Tumor
0.8
CPT0065750003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0077310003
Tumor
0.7
CPT0085670003
Tumor
0.7
CPT0012080003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0015810003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0007860003
Tumor
0.6
CPT0020120003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0087040003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0079300001
Normal
0.5
CPT0081880003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0092310003
Normal
0.4
CPT0024670003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0009020003
Normal
0.4
CPT0002350011
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0011240003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0000890001
Normal
0.3
CPT0065430003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0002370001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0001270001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0063330001
Normal
0.1
CPT0001550001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0088570001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0088970003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0012570003
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0000640003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0086360003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0075130003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0013790003
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0010110003
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0076330003
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0025050003
Tumor
-0.5
CPT0023360001
Normal
-0.5
CPT0001260009
Tumor
-0.5
CPT0026420001
Normal
-0.5
CPT0071150004
Tumor
-0.5
CPT0078990003
Tumor
-0.6
CPT0006530001
Normal
-0.6
CPT0023350003
Tumor
-0.6
CPT0012290003
Normal
-0.7
CPT0086830003
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0025610001
Normal
-0.8
CPT0081620001
Normal
-0.9
CPT0010120001
Normal
-0.9
CPT0006950001
Normal
-1.1
CPT0078830003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0089040001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0088500001
Normal
N/A
CPT0077490003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0075570001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0077500001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0023690003
Tumor
N/A
CPT0088480003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
