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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMM50 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
118.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
81.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
80.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
79.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
75.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
73.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
71.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
63.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
62.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
56.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
56.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
55.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
54.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
53.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
52.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
51.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
51.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
50.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
50.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
49.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
48.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
48.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
48.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
48.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
47.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
45.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
45.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
44.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
43.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
42.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
41.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
41.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
40.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
39.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
37.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
35.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
35.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
35.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
34.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
34.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
33.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
32.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
31.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
30.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
30.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
28.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
27.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
26.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
26.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
25.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
21.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
20.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
14.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMM50 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
82.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
78.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
72.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
69.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
67.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
67.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
67.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
66.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
66.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
65.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
64.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
64.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
63.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
62.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
62.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
62.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
61.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
60.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
60.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
60.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
59.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
59.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
59.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
57.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
57.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
57.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
56.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
56.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
56.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
56.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
56.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
56.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
55.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
55.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
55.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
55.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
55.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
54.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
54.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
54.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
54.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
54.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
53.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
53.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
53.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
53.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
53.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
53.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
53.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
52.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
52.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
52.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
52.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
52.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
52.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
51.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
51.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
51.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
51.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
51.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
51.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
51.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
51.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
51.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
51.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
50.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
50.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
50.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
50.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
50.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
50.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
49.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
49.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
49.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
49.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
49.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
49.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
49.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
49.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
49.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
48.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
48.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
48.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
48.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
48.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
48.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
48.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
48.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
48.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
48.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
48.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
48.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
48.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
47.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
47.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
47.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
47.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
47.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
47.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
47.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
47.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
47.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
47.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
47.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
47.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
47.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
47.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
47.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
46.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
46.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
46.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
46.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
46.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
46.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
46.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
46.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
46.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
46.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
46.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
45.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
45.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
45.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
45.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
45.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
45.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
45.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
45.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
45.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
44.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
44.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
44.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
44.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
44.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
44.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
44.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
44.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
43.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
43.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
43.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
43.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
43.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
43.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
43.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
43.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
43.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
43.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
43.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
43.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
43.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
43.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
43.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
43.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
43.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
43.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
42.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
42.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
42.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
42.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
42.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
42.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
42.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
42.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
42.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
42.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
42.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
41.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
41.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
41.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
41.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
41.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
41.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
41.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
41.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
41.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
40.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
40.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
40.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
40.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
40.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
40.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
40.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
40.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
40.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
40.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
39.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
39.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
39.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
39.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
39.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
39.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
39.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
39.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
39.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
39.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
39.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
38.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
38.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
38.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
38.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
38.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
38.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
38.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
38.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
38.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
38.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
38.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
38.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
38.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
37.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
37.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
37.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
37.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
37.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
37.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
37.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
37.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
37.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
36.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
36.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
36.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
36.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
36.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
36.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
36.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
36.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
36.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
36.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
36.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
36.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
36.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
35.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
35.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
35.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
35.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
35.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
35.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
35.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
35.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
35.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
35.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
35.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
35.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
35.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
35.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
34.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
34.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
34.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
34.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
34.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
34.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
34.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
34.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
34.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
34.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
34.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
34.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
34.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
33.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
33.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
33.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
33.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
33.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
33.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
33.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
33.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
33.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
33.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
33.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
33.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
32.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
32.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
32.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
32.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
32.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
32.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
32.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
31.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
31.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
31.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
31.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
31.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
30.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
30.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
30.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
30.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
30.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
30.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
30.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
29.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
29.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
29.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
29.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
29.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
29.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
28.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
28.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
28.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
28.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
28.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
28.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
27.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
27.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
27.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
27.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
27.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
27.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
26.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
25.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
25.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
25.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
25.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
24.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
24.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
24.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
23.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
23.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
22.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
20.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
16.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMM50 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
72.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
69.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
60.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
56.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
54.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
53.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
52.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
52.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
51.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
51.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
50.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
49.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
49.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
48.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
48.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
47.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
46.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
45.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
45.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
43.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
42.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
42.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
42.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
41.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
40.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
40.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
40.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
39.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
39.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
39.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
38.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
38.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
38.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
37.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
36.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
36.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
36.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
35.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
35.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
35.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
34.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
34.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
34.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
33.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
33.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
33.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
33.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
32.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
32.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
32.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
32.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
32.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
31.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
30.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
27.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
22.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMM50 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
85.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
75.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
71.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
67.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
66.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
66.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
64.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
62.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
62.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
59.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
55.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
54.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
54.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
54.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
53.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
53.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
53.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
52.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
51.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
51.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
50.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
50.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
50.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
50.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
49.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
49.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
48.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
48.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
48.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
48.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
48.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
48.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
46.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
46.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
45.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
45.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
45.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
45.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
45.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
44.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
44.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
44.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
44.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
44.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
43.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
43.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
43.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
43.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
43.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
43.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
42.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
42.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
42.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
42.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
41.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
41.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
41.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
41.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
41.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
40.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
40.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
40.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
40.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
40.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
40.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
39.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
39.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
38.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
38.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
38.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
37.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
37.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
37.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
37.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
37.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
37.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
37.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
37.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
36.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
36.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
36.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
36.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
36.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
36.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
36.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
36.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
36.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
35.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
35.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
35.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
34.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
34.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
34.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
34.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
34.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
34.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
33.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
33.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
33.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
32.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
32.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
32.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
32.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
32.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
32.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
32.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
31.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
31.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
31.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
30.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
30.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
30.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
30.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
30.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
30.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
30.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
29.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
29.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
29.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
28.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
28.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
28.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
28.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
27.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
27.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
27.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
27.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
27.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
27.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
27.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
27.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
27.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
27.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
26.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
25.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
25.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
25.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
25.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
25.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
24.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
24.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
23.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
22.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
22.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
22.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
22.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
21.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
21.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
20.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
18.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
18.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
15.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
15.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
12.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
1.3
CPT0078660003
Tumor
1.1
CPT0000790001
Normal
0.8
CPT0006730001
Normal
0.8
CPT0065450001
Normal
0.8
CPT0092800003
Normal
0.7
CPT0006950001
Normal
0.7
CPT0088920001
Normal
0.7
CPT0001350001
Normal
0.7
CPT0010170001
Normal
0.6
CPT0089480003
Normal
0.6
CPT0077140001
Normal
0.6
CPT0001550001
Normal
0.6
CPT0066430001
Normal
0.5
CPT0088780001
Normal
0.5
CPT0012670003
Tumor
0.5
CPT0025610001
Normal
0.5
CPT0025920001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0082010001
Normal
0.5
CPT0078840001
Normal
0.5
CPT0001230001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0092310003
Normal
0.5
CPT0007470001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0024670003
Tumor
0.5
CPT0023360001
Normal
0.5
CPT0092740003
Normal
0.5
CPT0014350001
Normal
0.5
CPT0088500001
Normal
0.5
CPT0088710001
Normal
0.4
CPT0088640003
Normal
0.4
CPT0026420001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0078940001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0001510001
Normal
0.4
CPT0079300001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0064400001
Normal
0.4
CPT0086370003
Normal
0.4
CPT0069010001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0001500009
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0063330001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0086890003
Normal
0.3
CPT0065820001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0014130001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0000660001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0079510001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0018250001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0010120001
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0025880003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0014370004
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0010110003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0075560003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0084590001
Normal
-0.4
CPT0079270003
Tumor
-0.4
CPT0025170003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0019130003
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0085670003
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0065430003
Tumor
-0.5
CPT0009000003
Tumor
-0.5
CPT0077110003
Tumor
-0.5
CPT0079230003
Tumor
-0.6
CPT0024680001
Normal
-0.6
CPT0063630003
Tumor
-0.6
CPT0077320001
Normal
-0.6
CPT0025350003
Tumor
-0.6
CPT0009020003
Normal
-0.6
CPT0075130003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0076330003
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0012370003
Tumor
-0.6
CPT0006630003
Tumor
-0.7
CPT0023690003
Tumor
-0.7
CPT0000870016
Tumor
-0.7
CPT0000780007
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0015910003
Tumor
-0.7
CPT0071150004
Tumor
-0.7
CPT0092730003
Tumor
-0.7
CPT0009080003
Normal
-0.7
CPT0065870003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0092790003
Tumor
-0.7
CPT0012080003
Tumor
-0.7
CPT0012920003
Normal
-0.8
CPT0009060003
Tumor
-0.8
CPT0065750003
Tumor
-0.8
CPT0088760003
Tumor
-0.8
CPT0025580004
Tumor
-0.8
CPT0017850003
Tumor
-0.8
CPT0081990003
Tumor
-0.8
CPT0001340003
Tumor
-0.8
CPT0021240003
Tumor
-0.8
CPT0025230003
Tumor
-0.9
CPT0025290003
Tumor
-0.9
CPT0065690003
Tumor
-0.9
CPT0079380003
Tumor
-1.0
CPT0065930003
Tumor
-1.0
CPT0077490003
Tumor
-1.0
CPT0088550004
Tumor
-1.1
CPT0066480003
Tumor
-1.1
CPT0012900004
Tumor
-1.1
CPT0084560003
Tumor
-1.2
CPT0011240003
Tumor
-1.9
CPT0017410003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.