We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1504.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6209.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5091.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4976.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4446.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
4120.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4076.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3678.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3373.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3320.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3227.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3155.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3140.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3135.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
3134.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3079.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
2987.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
2945.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2920.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2903.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2812.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2730.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2724.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
2724.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2722.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2717.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
2684.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
2679.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2676.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2673.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2657.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2552.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2519.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2486.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2476.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2476.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2468.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2461.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2457.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2429.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2426.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2419.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2401.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2397.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2329.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2306.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2284.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2282.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2255.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2229.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2224.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2206.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2171.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2116.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2101.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2055.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
2049.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
2036.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2029.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
2019.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2017.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2004.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
2000.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1997.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1985.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1983.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1971.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1958.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1957.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1952.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1946.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1946.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1937.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1929.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1914.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1906.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1898.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1885.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1877.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1875.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1867.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1831.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1821.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1816.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1815.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1812.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1806.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1794.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1782.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1780.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1778.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1776.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1764.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1746.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1733.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1730.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1729.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1728.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1726.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1715.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1707.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1690.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1674.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1668.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1668.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1660.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1659.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1658.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1658.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1655.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1650.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1648.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1643.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1632.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1626.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1624.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1623.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1618.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1612.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1611.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1604.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1603.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1603.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1598.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1598.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1587.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1569.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1568.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1563.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1560.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1559.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1556.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1556.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1547.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1539.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1536.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1528.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1523.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1518.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1518.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1500.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1498.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1497.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1482.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1481.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1475.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1474.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1473.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1462.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1459.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1458.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1447.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1447.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1447.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1444.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1444.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1443.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1437.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1434.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1434.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1429.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1424.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1420.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1417.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1408.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1405.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1403.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1399.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1391.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1386.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1383.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1382.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1381.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1380.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1373.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1365.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1356.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1355.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1352.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1350.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1350.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1344.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1338.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1336.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1329.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1329.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1329.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1321.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1317.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1317.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1312.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1307.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1304.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1300.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1295.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1282.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1278.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1277.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1277.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1274.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1272.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
1254.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1253.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1252.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1249.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1236.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1234.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1231.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1230.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1226.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1220.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1215.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1210.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1190.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1190.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1189.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1189.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1185.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1184.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1184.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1183.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1181.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1180.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1180.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1180.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1179.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1177.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1177.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1175.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1173.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1160.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1156.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1153.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1153.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1151.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1148.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1145.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1137.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1137.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1130.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1129.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1127.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1125.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1122.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1118.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1112.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1111.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1098.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1098.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1097.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1095.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1091.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1090.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1090.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1086.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1086.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1085.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1067.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1059.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1050.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1046.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1045.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1044.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1044.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1040.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1027.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1025.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1015.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1014.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1013.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1012.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1008.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1007.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
999.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
997.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
996.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
993.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
991.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
983.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
980.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
974.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
973.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
972.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
967.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
964.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
961.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
961.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
958.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
954.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
953.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
951.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
947.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
946.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
946.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
946.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
941.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
936.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
925.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
920.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
916.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
915.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
912.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
898.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
891.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
888.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
887.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
886.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
886.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
884.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
884.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
882.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
881.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
879.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
878.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
870.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
867.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
865.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
859.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
858.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
849.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
839.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
839.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
833.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
825.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
824.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
823.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
818.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
816.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
802.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
795.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
790.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
777.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
761.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
761.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
755.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
747.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
734.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
697.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
688.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
684.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
678.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
671.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
670.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
670.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
668.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
668.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
662.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
662.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
660.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
657.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
655.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
653.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
652.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
646.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
633.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
627.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
625.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
624.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
572.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
517.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
450.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
443.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1337.7
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
4590.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
4108.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
3741.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
3718.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
3350.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3306.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
3119.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3113.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
2837.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
2764.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
2543.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
2535.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
2518.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2507.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
2489.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
2488.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
2405.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
2388.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
2369.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
2356.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
2324.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
2316.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
2295.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
2220.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
2220.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
2219.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
2208.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
2167.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
2104.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
2101.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
2094.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
2080.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2079.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
2058.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
2052.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
2022.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
2021.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
2001.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
1979.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
1958.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1954.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
1923.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
1921.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1852.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1846.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
1829.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
1789.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
1786.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
1767.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1715.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1712.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
1692.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
1680.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1669.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
1659.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1651.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1612.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
1600.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
1584.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
1561.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
1554.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1531.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
1528.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
1523.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
1516.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
1504.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
1498.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1476.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
1471.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
1464.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
1456.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
1444.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
1441.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1440.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
1413.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
1398.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
1386.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1382.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
1377.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
1376.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1364.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
1362.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
1349.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1345.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
1331.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
1328.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
1328.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
1326.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
1308.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
1302.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1300.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
1294.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1291.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
1289.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
1288.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
1287.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
1281.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
1279.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1274.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1270.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1269.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
1255.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
1249.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
1243.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
1229.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
1222.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1221.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1220.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1219.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1217.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
1210.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
1189.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
1179.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
1174.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1160.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
1157.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
1157.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
1145.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
1144.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
1140.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
1139.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1134.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
1131.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
1120.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1102.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1102.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
1097.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1095.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1082.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
1080.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
1073.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1067.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
1066.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
1056.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1056.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1050.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1049.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
1049.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1044.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1042.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
1038.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
1032.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
1030.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1022.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
1022.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
1022.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
1012.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
1010.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
1009.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1004.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1004.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
993.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
986.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
978.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
966.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
957.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
956.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
955.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
954.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
951.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
945.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
927.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
927.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
912.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
910.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
888.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
887.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
874.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
870.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
860.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
857.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
855.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
848.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
843.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
843.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
838.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
835.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
821.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
817.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
815.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
812.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
811.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
801.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
799.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
796.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
792.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
787.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
785.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
785.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
783.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
774.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
774.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
772.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
772.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
769.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
767.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
761.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
749.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
745.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
745.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
742.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
731.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
731.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
730.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
725.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
721.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
721.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
720.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
696.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
690.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
689.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
686.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
676.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
662.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
650.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
645.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
626.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
623.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
599.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
592.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
589.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
550.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
493.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
491.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
489.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
465.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
419.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
399.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
380.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
340.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
226.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.6
685
Tumor
0.5
223
Tumor
0.4
1021
Tumor
0.4
367
Tumor
0.4
327
Tumor
0.4
567
Tumor
0.4
537
Tumor
0.3
285
Tumor
0.3
965
Tumor
0.3
113
Tumor
0.3
1027
Tumor
0.3
743
Tumor
0.3
851
Tumor
0.3
983
Tumor
0.3
467
Tumor
0.3
636
Normal
0.2
713
Tumor
0.2
353
Tumor
0.2
481
Tumor
0.2
331
Tumor
0.2
1025
Tumor
0.2
135
Tumor
0.2
395
Tumor
0.2
661
Tumor
0.2
227
Tumor
0.2
523
Tumor
0.2
721
Tumor
0.2
865
Tumor
0.2
937
Tumor
0.2
938
Normal
0.2
955
Tumor
0.2
815
Tumor
0.2
393
Tumor
0.2
724
Normal
0.2
517
Tumor
0.2
912
Normal
0.2
1014
Normal
0.2
981
Tumor
0.2
448
Normal
0.2
777
Tumor
0.2
413
Tumor
0.2
573
Tumor
0.2
978
Normal
0.2
267
Tumor
0.2
778
Normal
0.2
968
Normal
0.1
746
Normal
0.1
967
Tumor
0.1
1032
Normal
0.1
1026
Normal
0.1
214
Normal
0.1
131
Tumor
0.1
737
Tumor
0.1
257
Tumor
0.1
1031
Tumor
0.1
443
Tumor
0.1
387
Tumor
0.1
944
Normal
0.1
686
Normal
0.1
984
Normal
0.1
497
Tumor
0.1
745
Tumor
0.1
1022
Normal
0.1
864
Normal
0.1
696
Normal
0.1
421
Tumor
0.1
738
Normal
0.1
1028
Normal
0.1
412
Normal
0.1
385
Tumor
0.1
136
Normal
0.1
958
Normal
0.1
1041
Tumor
0.1
518
Normal
0.1
727
Tumor
0.1
356
Normal
0.1
671
Tumor
0.1
1044
Normal
0.1
966
Normal
0.1
447
Tumor
0.1
558
Normal
0.1
617
Tumor
0.1
742
Normal
0.1
526
Normal
0.1
284
Normal
0.1
785
Tumor
0.1
524
Normal
0.1
824
Normal
0.1
922
Normal
0.1
212
Normal
0.1
286
Normal
0.1
462
Normal
0.1
926
Normal
0.1
195
Tumor
0.1
351
Tumor
0.1
628
Normal
0.1
358
Normal
0.1
648
Normal
0.1
1043
Tumor
0.1
723
Tumor
0.1
525
Tumor
0.1
111
Normal
0.1
982
Normal
0.1
142
Normal
0.1
572
Normal
0.1
277
Tumor
0.1
191
Tumor
0.1
952
Normal
0.1
545
Tumor
0.1
187
Tumor
0.1
862
Normal
0.1
515
Tumor
0.1
228
Normal
0.1
137
Tumor
0.1
1015
Tumor
0.1
918
Normal
0.1
1046
Normal
0.1
535
Tumor
0.1
852
Normal
0.1
527
Tumor
0.1
536
Normal
0.1
278
Normal
0.1
123
Tumor
0.1
564
Normal
0.1
716
Normal
0.1
425
Tumor
0.1
964
Normal
0.1
953
Tumor
0.1
145
Tumor
0.1
957
Tumor
0.1
314
Normal
0.0
128
Normal
0.0
432
Normal
0.0
817
Tumor
0.0
392
Normal
0.0
222
Normal
0.0
466
Normal
0.0
923
Tumor
0.0
414
Normal
0.0
433
Tumor
0.0
213
Tumor
0.0
436
Normal
0.0
332
Normal
0.0
664
Normal
0.0
756
Normal
0.0
755
Tumor
0.0
715
Tumor
0.0
568
Normal
0.0
196
Normal
0.0
873
Tumor
0.0
124
Normal
0.0
112
Tumor
0.0
132
Normal
0.0
471
Tumor
0.0
494
Normal
0.0
534
Normal
0.0
924
Normal
0.0
546
Normal
0.0
528
Normal
0.0
114
Normal
0.0
474
Normal
0.0
232
Normal
0.0
427
Tumor
0.0
218
Normal
0.0
126
Normal
0.0
916
Normal
0.0
1016
Normal
0.0
431
Tumor
0.0
455
Tumor
0.0
697
Tumor
0.0
422
Normal
0.0
375
Tumor
0.0
516
Normal
0.0
954
Normal
0.0
728
Normal
0.0
647
Tumor
0.0
1042
Normal
0.0
147
Tumor
0.0
463
Tumor
0.0
221
Tumor
0.0
411
Tumor
0.0
452
Normal
0.0
352
Normal
0.0
786
Normal
0.0
571
Tumor
0.0
533
Tumor
0.0
394
Normal
0.0
913
Tumor
0.0
312
Normal
0.0
514
Normal
0.0
816
Normal
0.0
363
Tumor
0.0
376
Normal
0.0
813
Tumor
0.0
298
Normal
0.0
951
Tumor
0.0
426
Normal
0.0
488
Normal
0.0
823
Tumor
0.0
355
Tumor
0.0
866
Normal
0.0
484
Normal
0.0
342
Normal
0.0
172
Normal
0.0
217
Tumor
0.0
446
Normal
0.0
662
Normal
0.0
554
Normal
0.0
344
Normal
0.0
884
Normal
0.0
162
Normal
0.0
364
Normal
0.0
513
Tumor
0.0
434
Normal
0.0
714
Normal
0.0
493
Tumor
0.0
882
Normal
0.0
262
Normal
0.0
261
Tumor
0.0
665
Tumor
0.0
618
Normal
0.0
878
Normal
0.0
271
Tumor
0.0
272
Normal
0.0
975
Tumor
0.0
921
Tumor
0.0
171
Tumor
0.0
722
Normal
0.0
211
Tumor
0.0
311
Tumor
0.0
451
Tumor
0.0
698
Normal
0.0
858
Normal
0.0
186
Normal
0.0
663
Tumor
0.0
956
Normal
0.0
472
Normal
0.0
616
Normal
0.0
861
Tumor
0.0
818
Normal
-0.1
478
Normal
-0.1
461
Tumor
-0.1
914
Normal
-0.1
428
Normal
-0.1
867
Tumor
-0.1
976
Normal
-0.1
224
Normal
-0.1
666
Normal
-0.1
328
Normal
-0.1
148
Normal
-0.1
877
Tumor
-0.1
917
Tumor
-0.1
341
Tumor
-0.1
464
Normal
-0.1
388
Normal
-0.1
695
Tumor
-0.1
362
Normal
-0.1
482
Normal
-0.1
258
Normal
-0.1
188
Normal
-0.1
185
Tumor
-0.1
146
Normal
-0.1
925
Tumor
-0.1
553
Tumor
-0.1
138
Normal
-0.1
354
Normal
-0.1
357
Tumor
-0.1
814
Normal
-0.1
231
Tumor
-0.1
424
Normal
-0.1
963
Tumor
-0.1
857
Tumor
-0.1
977
Tumor
-0.1
672
Normal
-0.1
127
Tumor
-0.1
883
Tumor
-0.1
465
Tumor
-0.1
297
Tumor
-0.1
445
Tumor
-0.1
563
Tumor
-0.1
492
Normal
-0.1
642
Normal
-0.1
468
Normal
-0.1
141
Tumor
-0.1
943
Tumor
-0.1
313
Tumor
-0.1
283
Tumor
-0.1
477
Tumor
-0.1
574
Normal
-0.1
343
Tumor
-0.1
415
Tumor
-0.1
125
Tumor
-0.1
915
Tumor
-0.1
416
Normal
-0.1
384
Normal
-0.1
386
Normal
-0.1
1013
Tumor
-0.1
396
Normal
-0.1
635
Tumor
-0.1
473
Tumor
-0.1
444
Normal
-0.1
615
Tumor
-0.1
487
Tumor
-0.1
423
Tumor
-0.1
881
Tumor
-0.2
161
Tumor
-0.2
435
Tumor
-0.2
483
Tumor
-0.2
874
Normal
-0.2
368
Normal
-0.2
538
Normal
-0.2
744
Normal
-0.2
366
Normal
-0.2
365
Tumor
-0.2
456
Normal
-0.2
911
Tumor
-0.2
641
Tumor
-0.2
1045
Tumor
-0.2
391
Tumor
-0.2
741
Tumor
-0.2
268
Normal
-0.2
361
Tumor
-0.2
491
Tumor
-0.3
192
Normal
-0.3
498
Normal
-0.3
383
Tumor
-0.3
863
Tumor
-0.3
627
Tumor
-0.4
868
Normal
-0.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.