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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL3 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1428.2
Number of samples
283
Samples
Sample
Description
TPM
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
5958.2
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
4920.5
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
4557.0
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
3717.8
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
3662.0
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
3582.0
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
3536.4
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
3513.6
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
3321.8
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
3063.2
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
2963.1
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
2952.7
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
2911.9
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
2881.7
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
2819.9
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
2812.4
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
2810.3
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
2730.2
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
2646.5
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
2602.0
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
2587.7
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
2568.3
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
2533.5
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
2493.2
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
2483.7
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
2453.4
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
2430.7
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
2401.3
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
2369.5
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
2296.3
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
2287.5
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
2270.4
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
2265.0
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
2262.6
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
2240.7
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
2240.2
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
2209.9
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
2203.1
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
2198.5
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
2147.1
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
2131.6
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
2128.1
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
2121.2
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
2094.8
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
2086.2
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
2076.5
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
2075.6
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
2073.7
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
2057.3
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
2018.6
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
1984.9
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
1978.7
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
1962.5
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
1953.7
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
1944.2
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
1926.2
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
1925.0
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
1918.2
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
1915.1
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
1901.7
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
1875.6
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
1865.0
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
1843.2
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
1842.5
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
1824.7
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
1816.6
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
1812.7
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
1810.4
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
1808.4
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
1796.0
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
1782.9
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
1762.2
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
1754.3
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
1750.6
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
1741.3
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
1734.5
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
1723.1
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
1721.9
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
1718.6
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
1699.0
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
1688.8
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
1678.6
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
1678.1
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
1675.0
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
1667.4
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
1659.0
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
1655.3
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
1643.9
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
1633.8
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
1624.7
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
1620.3
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
1612.2
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
1606.0
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
1602.8
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
1586.0
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
1573.1
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
1572.4
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
1569.6
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
1566.5
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
1565.6
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
1565.6
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
1559.2
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
1546.5
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
1539.8
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
1532.8
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
1524.6
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
1523.8
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
1523.7
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
1520.9
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
1515.1
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
1513.5
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
1512.4
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
1501.3
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
1498.2
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
1483.6
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
1483.3
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
1471.5
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
1463.8
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
1462.1
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
1462.0
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
1460.6
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
1452.1
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
1449.8
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
1446.4
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
1442.4
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
1435.0
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
1428.8
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
1422.5
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
1416.3
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
1412.0
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
1409.2
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
1407.8
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
1401.1
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
1397.3
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
1395.0
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
1394.4
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
1391.0
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
1389.5
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
1372.9
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
1353.0
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
1348.2
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
1347.6
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
1346.0
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
1329.8
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
1327.6
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
1317.0
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
1310.5
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
1300.6
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
1300.4
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
1296.9
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
1295.4
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
1289.7
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
1289.6
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
1289.4
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
1270.8
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
1267.1
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
1257.1
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
1246.8
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
1230.7
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
1229.2
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
1219.0
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
1217.2
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
1209.2
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
1207.0
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
1205.7
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
1200.3
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
1200.2
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
1197.7
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
1197.7
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
1188.4
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
1188.0
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
1165.8
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
1152.2
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
1150.8
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
1125.2
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
1119.5
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
1105.2
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
1100.5
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
1095.6
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
1081.6
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
1076.4
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
1075.9
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
1069.9
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
1061.6
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
1060.4
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
1058.7
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
1057.9
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
1057.2
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
1050.5
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
1046.1
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
1016.9
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
992.3
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
980.2
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
969.8
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
963.2
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
955.4
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
952.3
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
938.1
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
930.1
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
927.8
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
925.8
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
920.1
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
918.9
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
916.4
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
912.7
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
910.5
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
906.5
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
903.1
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
883.3
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
878.9
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
878.1
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
868.1
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
856.9
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
854.5
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
847.1
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
819.7
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
817.3
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
810.9
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
810.8
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
793.3
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
792.1
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
786.6
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
786.0
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
780.0
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
777.9
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
773.4
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
752.4
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
741.9
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
739.2
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
729.0
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
714.7
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
709.4
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
705.2
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
700.0
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
698.1
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
684.8
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
678.8
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
678.5
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
671.2
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
660.5
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
650.9
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
642.1
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
638.4
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
618.8
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
616.6
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
598.6
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
594.3
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
594.2
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
583.8
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
582.2
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
578.5
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
573.3
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
570.1
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
562.3
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
555.7
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
552.3
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
544.4
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
537.8
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
535.9
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
530.7
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
527.0
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
526.6
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
516.4
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
514.0
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
506.3
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
494.6
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
489.5
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
482.7
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
469.1
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
450.1
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
447.9
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
445.8
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
414.0
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
410.9
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
377.2
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
373.7
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
361.6
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
342.6
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
295.9
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
277.4
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
266.9
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
167.5
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
97.2
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.