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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOM1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
91.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
212.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
180.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
169.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
163.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
152.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
148.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
146.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
145.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
144.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
141.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
138.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
129.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
126.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
126.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
125.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
121.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
120.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
115.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
111.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
111.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
110.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
103.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
102.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
102.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
101.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
99.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
97.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
94.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
93.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
92.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
91.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
91.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
87.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
86.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
83.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
82.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
82.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
80.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
78.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
77.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
71.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
70.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
69.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
68.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
67.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
67.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
66.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
64.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
63.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
59.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
50.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
49.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
49.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
47.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
47.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
46.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
39.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
32.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
29.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
28.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
22.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOM1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
97.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
91.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
80.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
79.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
76.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
69.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
68.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
68.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
65.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
64.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
61.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
59.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
56.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
53.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
53.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
53.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
52.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
52.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
51.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
51.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
50.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
49.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
49.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
49.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
49.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
49.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
48.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
48.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
48.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
48.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
48.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
47.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
47.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
47.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
47.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
46.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
46.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
45.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
45.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
44.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
44.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
44.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
44.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
44.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
44.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
44.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
43.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
43.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
43.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
43.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
43.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
43.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
42.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
42.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
42.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
42.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
42.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
42.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
42.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
42.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
42.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
42.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
42.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
41.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
41.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
41.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
41.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
41.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
41.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
41.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
41.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
40.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
40.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
40.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
40.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
40.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
40.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
40.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
40.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
40.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
40.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
40.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
40.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
40.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
40.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
40.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
39.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
39.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
39.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
39.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
39.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
39.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
39.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
39.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
39.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
39.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
39.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
39.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
39.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
39.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
38.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
38.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
38.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
38.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
38.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
38.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
38.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
38.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
38.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
38.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
37.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
37.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
37.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
37.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
37.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
37.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
37.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
37.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
37.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
37.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
37.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
37.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
37.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
37.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
37.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
36.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
36.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
36.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
36.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
36.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
36.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
36.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
36.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
36.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
36.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
36.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
36.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
35.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
35.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
35.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
35.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
35.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
35.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
35.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
35.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
35.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
35.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
35.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
35.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
35.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
35.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
35.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
35.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
35.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
34.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
34.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
34.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
34.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
34.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
34.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
34.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
34.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
34.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
34.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
34.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
34.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
34.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
34.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
33.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
33.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
33.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
33.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
33.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
33.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
33.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
33.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
33.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
33.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
33.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
33.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
32.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
32.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
32.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
32.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
32.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
32.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
32.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
31.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
31.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
31.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
31.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
31.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
31.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
31.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
31.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
31.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
31.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
31.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
31.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
30.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
30.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
30.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
30.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
30.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
30.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
30.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
30.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
30.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
29.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
29.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
29.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
29.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
29.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
29.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
29.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
29.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
28.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
28.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
28.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
28.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
28.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
28.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
27.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
27.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
27.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
27.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
27.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
27.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
27.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
27.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
27.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
27.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
27.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
27.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
27.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
27.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
26.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
26.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
26.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
26.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
26.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
26.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
25.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
25.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
25.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
25.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
25.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
25.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
25.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
24.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
24.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
24.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
23.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
23.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
22.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
22.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
22.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
22.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
22.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
21.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
20.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
19.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
18.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
17.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
16.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOM1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
93.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
62.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
58.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
51.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
48.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
47.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
46.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
45.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
45.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
45.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
44.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
43.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
42.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
42.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
41.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
41.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
41.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
41.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
40.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
40.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
40.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
40.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
39.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
38.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
37.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
37.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
37.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
37.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
36.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
35.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
35.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
35.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
35.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
34.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
34.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
34.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
33.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
33.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
33.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
32.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
32.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
31.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
31.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
30.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
30.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
29.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
28.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
28.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
27.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
27.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
26.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
25.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
25.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
15.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOM1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
151.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
127.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
111.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
100.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
98.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
96.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
95.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
83.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
81.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
80.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
79.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
77.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
76.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
76.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
75.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
74.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
74.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
73.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
72.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
72.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
70.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
70.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
69.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
69.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
68.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
68.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
66.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
66.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
66.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
66.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
65.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
64.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
64.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
63.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
62.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
62.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
62.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
61.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
60.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
60.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
60.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
60.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
60.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
60.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
58.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
58.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
58.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
58.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
58.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
57.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
57.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
56.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
56.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
56.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
56.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
55.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
55.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
55.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
54.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
54.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
54.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
54.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
53.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
53.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
53.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
53.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
52.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
52.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
52.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
52.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
52.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
52.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
52.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
52.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
51.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
51.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
51.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
51.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
51.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
51.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
51.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
50.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
50.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
50.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
49.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
49.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
49.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
49.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
48.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
47.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
47.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
46.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
45.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
45.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
45.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
45.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
45.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
45.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
45.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
45.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
44.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
44.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
44.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
44.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
43.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
43.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
43.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
43.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
43.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
43.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
42.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
42.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
42.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
42.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
42.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
42.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
42.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
41.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
40.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
40.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
40.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
40.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
39.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
39.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
39.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
39.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
38.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
38.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
38.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
37.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
37.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
36.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
36.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
36.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
35.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
35.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
35.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
35.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
35.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
34.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
34.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
33.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
33.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
33.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
33.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
33.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
33.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
32.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
32.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
31.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
31.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
29.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
29.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
28.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
28.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
28.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
27.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
27.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
27.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
27.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
26.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
26.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
26.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
25.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
25.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
25.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
24.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
24.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
21.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
21.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
20.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
19.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
16.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
14.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.6
CPT0078660003
Tumor
1.3
CPT0088970003
Tumor
1.2
CPT0012550003
Tumor
0.7
CPT0088550004
Tumor
0.6
CPT0076330003
Tumor
0.5
CPT0002270011
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0092290003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0025610001
Normal
0.3
CPT0076350001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0012090003
Normal
0.2
CPT0078530001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0077500001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0079000001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0025060001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0092740003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0001190001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0092730003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0078990003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0084590001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0017850003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0012180003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
