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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOM1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
127.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
118.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
111.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
109.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
102.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
100.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
97.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
97.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
97.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
97.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
93.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
92.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
91.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
90.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
88.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
87.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
86.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
84.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
84.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
79.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
79.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
78.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
78.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
76.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
75.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
75.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
74.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
74.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
72.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
71.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
70.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
70.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
70.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
69.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
68.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
68.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
67.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
67.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
66.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
66.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
65.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
64.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
64.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
64.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
64.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
63.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
63.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
62.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
62.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
62.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
62.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
61.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
60.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
60.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
59.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
59.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
58.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
58.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
58.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
58.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
58.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
58.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
58.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
57.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
57.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
57.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
57.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
57.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
56.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
56.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
56.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
56.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
56.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
55.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
55.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
55.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
55.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
54.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
54.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
54.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
54.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
54.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
54.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
54.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
53.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
53.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
53.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
53.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
52.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
52.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
52.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
51.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
51.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
51.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
51.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
51.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
51.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
51.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
50.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
50.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
50.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
50.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
50.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
50.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
49.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
49.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
49.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
48.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
48.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
48.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
48.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
48.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
48.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
48.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
47.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
47.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
47.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
47.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
47.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
47.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
46.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
46.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
46.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
46.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
46.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
46.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
46.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
46.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
45.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
45.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
45.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
45.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
45.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
45.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
45.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
44.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
44.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
44.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
44.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
44.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
43.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
43.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
43.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
43.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
42.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
42.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
42.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
42.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
42.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
42.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
42.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
42.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
42.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
42.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
42.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
41.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
41.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
41.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
41.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
41.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
41.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
40.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
40.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
40.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
40.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
40.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
40.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
40.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
39.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
39.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
39.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
39.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
38.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
38.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
38.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
38.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
38.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
38.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
38.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
38.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
38.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
38.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
38.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
38.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
37.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
37.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
37.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
37.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
37.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
36.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
36.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
36.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
36.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
36.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
36.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
36.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
36.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
36.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
36.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
35.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
35.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
35.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
35.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
35.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
35.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
35.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
34.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
34.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
34.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
34.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
34.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
33.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
33.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
33.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
33.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
33.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
33.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
33.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
33.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
33.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
32.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
32.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
32.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
32.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
32.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
32.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
31.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
31.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
31.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
31.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
31.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
31.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
30.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
30.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
30.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
30.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
30.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
30.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
30.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
30.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
29.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
29.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
29.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
29.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
29.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
29.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
29.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
28.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
28.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
28.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
28.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
28.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
28.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
28.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
28.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
28.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
28.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
28.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
28.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
28.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
27.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
27.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
27.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
27.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
27.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
26.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
26.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
26.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
26.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
26.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
26.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
26.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
26.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
25.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
25.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
25.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
25.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
25.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
25.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
24.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
24.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
24.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
24.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
24.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
24.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
24.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
24.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
24.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
24.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
24.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
23.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
23.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
23.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
23.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
22.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
22.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
22.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
21.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
21.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
21.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
21.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
21.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
21.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
21.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
20.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
20.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
20.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
19.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
19.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
19.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
18.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
18.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
18.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
18.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
17.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
17.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
17.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
17.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
16.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
16.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
16.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
16.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
15.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
15.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
15.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
15.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
15.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
14.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
13.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
13.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
12.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
12.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
10.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
10.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
10.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
8.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOM1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.1
Number of samples
231
Samples
Sample
Description
TPM
DO45209
0 years, male, NA, stage:4, alive, 1350 days
136.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
130.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
82.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
82.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
79.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
75.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
74.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
72.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
71.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
70.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
68.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
65.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
63.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
62.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
62.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
62.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
61.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
60.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
60.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
59.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
58.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
57.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
57.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
56.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
55.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
55.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
55.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
55.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
54.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
54.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
54.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
52.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
51.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
50.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
49.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
48.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
48.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
47.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
45.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
44.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
44.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
44.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
43.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
42.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
42.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
42.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
42.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
42.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
41.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
41.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
41.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
41.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
40.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
40.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
40.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
40.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
40.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
40.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
40.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
40.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
39.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
39.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
39.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
39.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
39.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
39.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
38.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
38.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
37.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
37.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
37.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
37.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
37.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
37.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
36.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
36.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
36.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
36.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
36.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
36.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
36.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
36.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
35.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
35.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
35.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
35.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
35.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
35.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
35.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
35.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
34.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
34.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
34.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
34.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
34.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
33.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
33.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
33.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
33.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
33.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
32.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
32.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
32.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
32.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
32.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
31.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
31.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
31.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
30.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
30.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
30.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
30.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
30.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
30.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
30.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
30.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
29.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
29.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
29.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
29.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
29.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
29.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
29.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
29.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
28.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
28.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
28.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
28.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
28.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
28.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
28.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
27.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
27.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
27.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
27.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
27.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
27.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
27.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
26.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
26.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
26.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
26.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
26.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
26.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
26.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
26.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
25.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
25.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
25.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
25.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
25.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
25.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
25.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
25.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
25.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
24.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
24.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
24.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
24.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
24.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
24.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
24.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
24.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
23.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
23.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
23.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
23.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
23.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
23.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
23.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
23.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
22.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
22.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
22.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
22.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
22.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
21.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
21.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
21.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
21.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
20.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
20.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
20.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
20.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
20.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
19.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
19.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
18.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
18.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
18.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
18.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
18.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
18.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
18.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
18.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
18.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
17.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
17.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
17.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
17.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
17.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
16.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
16.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
16.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
16.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
15.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
14.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
11.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
10.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
10.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1027
Tumor
1.0
331
Tumor
0.9
743
Tumor
0.7
221
Tumor
0.6
533
Tumor
0.6
147
Tumor
0.5
911
Tumor
0.5
737
Tumor
0.5
745
Tumor
0.5
1041
Tumor
0.5
527
Tumor
0.4
443
Tumor
0.4
477
Tumor
0.4
363
Tumor
0.4
641
Tumor
0.4
537
Tumor
0.4
913
Tumor
0.4
695
Tumor
0.4
615
Tumor
0.4
627
Tumor
0.4
171
Tumor
0.4
685
Tumor
0.4
1025
Tumor
0.3
981
Tumor
0.3
571
Tumor
0.3
858
Normal
0.3
231
Tumor
0.3
824
Normal
0.3
313
Tumor
0.3
223
Tumor
0.3
517
Tumor
0.3
746
Normal
0.3
867
Tumor
0.3
123
Tumor
0.3
257
Tumor
0.3
367
Tumor
0.3
436
Normal
0.3
1043
Tumor
0.3
564
Normal
0.3
482
Normal
0.3
361
Tumor
0.2
957
Tumor
0.2
727
Tumor
0.2
515
Tumor
0.2
131
Tumor
0.2
285
Tumor
0.2
1021
Tumor
0.2
1026
Normal
0.2
965
Tumor
0.2
426
Normal
0.2
136
Normal
0.2
1045
Tumor
0.2
365
Tumor
0.2
663
Tumor
0.2
488
Normal
0.2
815
Tumor
0.2
817
Tumor
0.2
553
Tumor
0.2
261
Tumor
0.2
471
Tumor
0.2
427
Tumor
0.2
286
Normal
0.2
868
Normal
0.2
977
Tumor
0.2
777
Tumor
0.2
1022
Normal
0.2
267
Tumor
0.2
952
Normal
0.2
554
Normal
0.2
943
Tumor
0.2
786
Normal
0.2
958
Normal
0.2
232
Normal
0.2
714
Normal
0.2
568
Normal
0.2
756
Normal
0.2
921
Tumor
0.2
148
Normal
0.2
127
Tumor
0.2
394
Normal
0.2
862
Normal
0.2
462
Normal
0.2
525
Tumor
0.2
912
Normal
0.2
396
Normal
0.1
428
Normal
0.1
742
Normal
0.1
648
Normal
0.1
481
Tumor
0.1
642
Normal
0.1
447
Tumor
0.1
484
Normal
0.1
1046
Normal
0.1
353
Tumor
0.1
616
Normal
0.1
526
Normal
0.1
925
Tumor
0.1
534
Normal
0.1
716
Normal
0.1
424
Normal
0.1
162
Normal
0.1
857
Tumor
0.1
354
Normal
0.1
421
Tumor
0.1
416
Normal
0.1
425
Tumor
0.1
573
Tumor
0.1
114
Normal
0.1
422
Normal
0.1
464
Normal
0.1
698
Normal
0.1
818
Normal
0.1
456
Normal
0.1
968
Normal
0.1
124
Normal
0.1
724
Normal
0.1
518
Normal
0.1
452
Normal
0.1
662
Normal
0.1
1042
Normal
0.1
618
Normal
0.1
487
Tumor
0.1
128
Normal
0.1
498
Normal
0.1
664
Normal
0.1
132
Normal
0.1
666
Normal
0.1
472
Normal
0.1
358
Normal
0.1
314
Normal
0.1
567
Tumor
0.1
298
Normal
0.1
955
Tumor
0.1
414
Normal
0.1
514
Normal
0.1
451
Tumor
0.1
816
Normal
0.1
528
Normal
0.1
392
Normal
0.1
222
Normal
0.1
864
Normal
0.1
882
Normal
0.1
445
Tumor
0.1
572
Normal
0.1
545
Tumor
0.1
975
Tumor
0.1
938
Normal
0.1
135
Tumor
0.1
1015
Tumor
0.1
137
Tumor
0.1
574
Normal
0.1
271
Tumor
0.1
395
Tumor
0.1
738
Normal
0.1
328
Normal
0.1
976
Normal
0.1
516
Normal
0.1
112
Tumor
0.1
722
Normal
0.1
728
Normal
0.1
494
Normal
0.0
951
Tumor
0.0
1031
Tumor
0.0
1028
Normal
0.0
448
Normal
0.0
312
Normal
0.0
723
Tumor
0.0
721
Tumor
0.0
628
Normal
0.0
466
Normal
0.0
446
Normal
0.0
953
Tumor
0.0
111
Normal
0.0
546
Normal
0.0
696
Normal
0.0
362
Normal
0.0
172
Normal
0.0
744
Normal
0.0
866
Normal
0.0
914
Normal
0.0
558
Normal
0.0
455
Tumor
0.0
944
Normal
0.0
228
Normal
0.0
686
Normal
0.0
272
Normal
0.0
1032
Normal
0.0
713
Tumor
0.0
258
Normal
0.0
432
Normal
0.0
671
Tumor
0.0
461
Tumor
0.0
1016
Normal
0.0
964
Normal
0.0
982
Normal
0.0
386
Normal
0.0
915
Tumor
0.0
366
Normal
0.0
956
Normal
0.0
513
Tumor
0.0
356
Normal
0.0
523
Tumor
0.0
1014
Normal
0.0
126
Normal
0.0
444
Normal
0.0
352
Normal
0.0
412
Normal
0.0
491
Tumor
0.0
141
Tumor
0.0
778
Normal
0.0
874
Normal
0.0
924
Normal
0.0
364
Normal
0.0
852
Normal
0.0
413
Tumor
0.0
415
Tumor
0.0
715
Tumor
0.0
268
Normal
0.0
145
Tumor
0.0
433
Tumor
0.0
186
Normal
0.0
823
Tumor
0.0
563
Tumor
0.0
342
Normal
0.0
142
Normal
0.0
262
Normal
0.0
884
Normal
0.0
636
Normal
0.0
878
Normal
0.0
922
Normal
0.0
368
Normal
0.0
492
Normal
-0.1
278
Normal
-0.1
277
Tumor
-0.1
635
Tumor
-0.1
196
Normal
-0.1
376
Normal
-0.1
954
Normal
-0.1
387
Tumor
-0.1
388
Normal
-0.1
483
Tumor
-0.1
138
Normal
-0.1
937
Tumor
-0.1
468
Normal
-0.1
212
Normal
-0.1
755
Tumor
-0.1
327
Tumor
-0.1
284
Normal
-0.1
665
Tumor
-0.1
343
Tumor
-0.1
785
Tumor
-0.1
814
Normal
-0.1
813
Tumor
-0.1
918
Normal
-0.1
357
Tumor
-0.1
188
Normal
-0.1
557
Tumor
-0.1
332
Normal
-0.1
125
Tumor
-0.1
493
Tumor
-0.1
465
Tumor
-0.1
877
Tumor
-0.1
923
Tumor
-0.1
966
Normal
-0.1
926
Normal
-0.1
497
Tumor
-0.1
355
Tumor
-0.1
113
Tumor
-0.2
984
Normal
-0.2
617
Tumor
-0.2
297
Tumor
-0.2
384
Normal
-0.2
218
Normal
-0.2
524
Normal
-0.2
672
Normal
-0.2
214
Normal
-0.2
434
Normal
-0.2
463
Tumor
-0.2
224
Normal
-0.2
538
Normal
-0.2
146
Normal
-0.2
978
Normal
-0.2
697
Tumor
-0.2
341
Tumor
-0.2
191
Tumor
-0.2
283
Tumor
-0.2
344
Normal
-0.2
478
Normal
-0.2
851
Tumor
-0.2
916
Normal
-0.3
217
Tumor
-0.3
967
Tumor
-0.3
423
Tumor
-0.3
536
Normal
-0.3
1044
Normal
-0.3
187
Tumor
-0.3
865
Tumor
-0.3
741
Tumor
-0.3
873
Tumor
-0.3
983
Tumor
-0.3
192
Normal
-0.3
883
Tumor
-0.3
195
Tumor
-0.3
535
Tumor
-0.3
383
Tumor
-0.4
393
Tumor
-0.4
385
Tumor
-0.4
161
Tumor
-0.4
351
Tumor
-0.4
185
Tumor
-0.4
391
Tumor
-0.4
311
Tumor
-0.4
474
Normal
-0.4
375
Tumor
-0.4
213
Tumor
-0.5
881
Tumor
-0.5
861
Tumor
-0.5
661
Tumor
-0.5
227
Tumor
-0.5
863
Tumor
-0.5
431
Tumor
-0.6
467
Tumor
-0.6
917
Tumor
-0.6
411
Tumor
-0.6
647
Tumor
-0.6
963
Tumor
-0.7
1013
Tumor
-0.8
211
Tumor
-0.8
435
Tumor
-0.9
473
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
