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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TIMP3 is not prognostic in Glioblastoma Multiforme (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
109.4
Number of samples
141
Samples
Sample
Description
TPM
TCGA-28-2514-01A
0 years, male, asian, stage:'--, alive, 160 days
383.5
TCGA-27-2528-01A
0 years, male, white, stage:'--, dead, 480 days
342.9
TCGA-26-1442-01A
0 years, male, white, stage:'--, alive, 953 days
330.0
TCGA-28-5218-01A
0 years, male, white, stage:'--, dead, 157 days
304.1
TCGA-02-0047-01A
0 years, male, white, stage:'--, dead, 448 days
262.5
TCGA-06-0644-01A
0 years, male, black or african american, stage:'--, dead, 384 days
249.5
TCGA-28-5209-01A
0 years, female, white, stage:'--, alive, 442 days
247.3
TCGA-06-2564-01A
0 years, male, white, stage:'--, alive, 181 days
240.5
TCGA-06-0184-01A
0 years, male, white, stage:'--, dead, 2126 days
236.8
TCGA-26-5139-01A
0 years, female, white, stage:'--, alive, 48 days
232.3
TCGA-06-0157-01A
0 years, female, white, stage:'--, dead, 97 days
217.0
TCGA-28-5215-01A
0 years, female, white, stage:'--, dead, 335 days
214.7
TCGA-15-1444-01A
0 years, male, white, stage:'--, dead, 1537 days
212.7
TCGA-06-0125-01A
0 years, female, white, stage:'--, dead, 1448 days
212.1
TCGA-16-0846-01A
0 years, male, white, stage:'--, dead, 119 days
201.4
TCGA-28-1753-01A
0 years, male, white, stage:'--, alive, 37 days
199.4
TCGA-06-2569-01A
0 years, female, black or african american, stage:'--, alive, 13 days
199.2
TCGA-06-0187-01A
0 years, male, white, stage:'--, dead, 828 days
193.9
TCGA-06-2565-01A
0 years, male, asian, stage:'--, dead, 506 days
193.5
TCGA-41-5651-01A
0 years, female, black or african american, stage:'--, dead, 460 days
189.8
TCGA-76-4931-01A
0 years, female, white, stage:'--, dead, 279 days
186.1
TCGA-06-2559-01A
0 years, male, white, stage:'--, dead, 150 days
186.0
TCGA-12-0618-01A
0 years, male, white, stage:'--, dead, 395 days
181.1
TCGA-76-4932-01A
0 years, female, white, stage:'--, dead, 1458 days
178.3
TCGA-19-2619-01A
0 years, female, black or african american, stage:'--, alive, 294 days
176.7
TCGA-28-5207-01A
0 years, male, white, stage:'--, dead, 343 days
176.3
TCGA-32-1982-01A
0 years, female, white, stage:'--, dead, 142 days
174.0
TCGA-28-5216-01A
0 years, male, white, stage:'--, alive, 415 days
162.4
TCGA-41-2572-01A
0 years, male, white, stage:'--, dead, 406 days
158.5
TCGA-28-5204-01A
0 years, male, white, stage:'--, dead, 454 days
153.7
TCGA-27-1837-01A
0 years, male, white, stage:'--, dead, 427 days
153.4
TCGA-06-2570-01A
0 years, female, white, stage:'--, alive, 958 days
153.0
TCGA-06-0747-01A
0 years, male, white, stage:'--, dead, 82 days
152.6
TCGA-32-2638-01A
0 years, male, white, stage:'--, dead, 766 days
147.3
TCGA-19-2624-01A
0 years, male, white, stage:'--, dead, 5 days
143.9
TCGA-06-0190-01A
0 years, male, white, stage:'--, dead, 317 days
143.1
TCGA-27-1830-01A
0 years, male, white, stage:'--, dead, 154 days
138.5
TCGA-27-2521-01A
0 years, male, white, stage:'--, dead, 510 days
138.4
TCGA-02-2485-01A
0 years, male, black or african american, stage:'--, alive, 470 days
136.6
TCGA-12-0619-01A
0 years, male, white, stage:'--, dead, 1062 days
135.6
TCGA-02-0055-01A
0 years, female, white, stage:'--, dead, 76 days
135.0
TCGA-06-5417-01A
0 years, female, white, stage:'--, alive, 155 days
131.9
TCGA-06-0174-01A
0 years, male, white, stage:'--, dead, 98 days
126.8
TCGA-14-2554-01A
0 years, female, white, stage:'--, dead, 532 days
125.8
TCGA-06-0743-01A
0 years, male, white, stage:'--, dead, 803 days
123.9
TCGA-06-0158-01A
0 years, male, white, stage:'--, dead, 329 days
121.2
TCGA-06-0138-01A
0 years, male, white, stage:'--, dead, 737 days
118.8
TCGA-19-2629-01A
0 years, male, white, stage:'--, dead, 737 days
118.5
TCGA-06-2561-01A
0 years, female, white, stage:'--, dead, 537 days
117.2
TCGA-06-5859-01A
0 years, male, white, stage:'--, alive, 139 days
115.6
TCGA-06-0129-01A
0 years, male, asian, stage:'--, dead, 1024 days
115.5
TCGA-06-0211-01A
0 years, male, white, stage:'--, dead, 360 days
115.0
TCGA-12-3653-01A
0 years, female, white, stage:'--, dead, 442 days
114.6
TCGA-06-0130-01A
0 years, male, white, stage:'--, dead, 394 days
114.0
TCGA-41-4097-01A
0 years, female, white, stage:'--, dead, 6 days
112.3
TCGA-06-5414-01A
0 years, male, white, stage:'--, alive, 273 days
111.5
TCGA-14-0789-01A
0 years, male, white, stage:'--, dead, 342 days
110.9
TCGA-06-5858-01A
0 years, female, white, stage:'--, alive, 187 days
110.3
TCGA-12-3650-01A
0 years, male, white, stage:'--, dead, 333 days
109.8
TCGA-19-2620-01A
0 years, male, white, stage:'--, dead, 148 days
108.2
TCGA-06-0210-01A
0 years, female, white, stage:'--, dead, 225 days
106.8
TCGA-12-5299-01A
0 years, female, white, stage:'--, dead, 98 days
106.4
TCGA-12-3652-01A
0 years, male, white, stage:'--, dead, 1062 days
106.3
TCGA-06-1804-01A
0 years, female, white, stage:'--, dead, 414 days
104.5
TCGA-06-5856-01A
0 years, male, white, stage:'--, dead, 114 days
102.2
TCGA-41-3915-01A
0 years, male, white, stage:'--, dead, 360 days
96.5
TCGA-14-1825-01A
0 years, male, white, stage:'--, dead, 232 days
96.0
TCGA-06-5408-01A
0 years, female, white, stage:'--, dead, 357 days
93.7
TCGA-14-1034-01A
0 years, female, stage:'--, dead, 485 days
92.2
TCGA-26-5135-01A
0 years, female, white, stage:'--, dead, 270 days
92.0
TCGA-19-5960-01A
0 years, male, white, stage:'--, dead, 455 days
89.6
TCGA-06-2558-01A
0 years, female, white, stage:'--, dead, 380 days
89.4
TCGA-19-2625-01A
0 years, female, white, stage:'--, dead, 124 days
89.1
TCGA-27-1834-01A
0 years, male, white, stage:'--, dead, 1233 days
88.5
TCGA-12-0821-01A
0 years, male, white, stage:'--, dead, 323 days
87.8
TCGA-06-0646-01A
0 years, male, white, stage:'--, dead, 175 days
86.5
TCGA-06-0686-01A
0 years, male, white, stage:'--, dead, 432 days
85.1
TCGA-02-2483-01A
0 years, male, asian, stage:'--, alive, 466 days
84.2
TCGA-06-0749-01A
0 years, male, black or african american, stage:'--, dead, 82 days
81.7
TCGA-12-0616-01A
0 years, female, white, stage:'--, dead, 448 days
81.5
TCGA-06-0750-01A
0 years, male, white, stage:'--, dead, 28 days
80.5
TCGA-27-1835-01A
0 years, female, white, stage:'--, dead, 648 days
79.6
TCGA-06-5412-01A
0 years, female, white, stage:'--, dead, 138 days
78.1
TCGA-06-0645-01A
0 years, female, white, stage:'--, dead, 175 days
77.9
TCGA-06-0878-01A
0 years, male, white, stage:'--, alive, 218 days
77.4
TCGA-76-4925-01A
0 years, male, white, stage:'--, dead, 146 days
77.3
TCGA-06-2557-01A
0 years, male, black or african american, stage:'--, dead, 33 days
76.6
TCGA-76-4927-01A
0 years, male, white, stage:'--, dead, 535 days
75.5
TCGA-06-0132-01A
0 years, male, white, stage:'--, dead, 771 days
75.3
TCGA-32-2615-01A
0 years, male, white, stage:'--, dead, 485 days
72.9
TCGA-08-0386-01A
0 years, male, white, stage:'--, dead, 548 days
71.2
TCGA-06-5413-01A
0 years, male, white, stage:'--, alive, 268 days
70.2
TCGA-14-1829-01A
0 years, male, black or african american, stage:'--, alive, 218 days
68.5
TCGA-28-2513-01A
0 years, female, white, stage:'--, alive, 222 days
68.4
TCGA-32-4213-01A
0 years, female, white, stage:'--, alive, 604 days
66.6
TCGA-32-1970-01A
0 years, male, white, stage:'--, dead, 468 days
65.1
TCGA-14-0787-01A
0 years, male, asian, stage:'--, dead, 68 days
63.2
TCGA-76-4929-01A
0 years, female, white, stage:'--, dead, 111 days
62.1
TCGA-06-0882-01A
0 years, male, white, stage:'--, dead, 632 days
61.5
TCGA-32-5222-01A
0 years, male, white, stage:'--, dead, 585 days
61.3
TCGA-06-2562-01A
0 years, male, white, stage:'--, dead, 382 days
60.3
TCGA-32-2616-01A
0 years, female, white, stage:'--, dead, 224 days
59.6
TCGA-15-0742-01A
0 years, male, white, stage:'--, dead, 419 days
58.7
TCGA-32-1980-01A
0 years, male, white, stage:'--, dead, 36 days
58.5
TCGA-32-2632-01A
0 years, male, white, stage:'--, dead, 269 days
58.3
TCGA-19-4065-01A
0 years, male, white, stage:'--, alive, 214 days
58.3
TCGA-27-1832-01A
0 years, female, white, stage:'--, dead, 300 days
56.5
TCGA-06-0168-01A
0 years, female, white, stage:'--, dead, 598 days
53.9
TCGA-14-0817-01A
0 years, female, white, stage:'--, dead, 164 days
52.9
TCGA-26-5133-01A
0 years, male, white, stage:'--, alive, 452 days
51.3
TCGA-32-2634-01A
0 years, male, white, stage:'--, alive, 693 days
50.6
TCGA-06-0744-01A
0 years, male, white, stage:'--, dead, 1426 days
50.3
TCGA-06-5410-01A
0 years, female, white, stage:'--, dead, 108 days
50.2
TCGA-06-5418-01A
0 years, female, white, stage:'--, dead, 83 days
49.7
TCGA-06-5416-01A
0 years, female, white, stage:'--, alive, 204 days
49.5
TCGA-28-5208-01A
0 years, male, white, stage:'--, dead, 544 days
47.4
TCGA-06-0156-01A
0 years, male, white, stage:'--, dead, 178 days
46.9
TCGA-26-5132-01A
0 years, male, white, stage:'--, alive, 286 days
46.6
TCGA-27-2519-01A
0 years, male, white, stage:'--, dead, 550 days
46.6
TCGA-27-2526-01A
0 years, female, white, stage:'--, dead, 87 days
46.0
TCGA-14-0871-01A
0 years, female, white, stage:'--, dead, 880 days
45.4
TCGA-06-0141-01A
0 years, male, white, stage:'--, dead, 313 days
45.2
TCGA-06-5411-01A
0 years, male, white, stage:'--, dead, 254 days
45.0
TCGA-06-0745-01A
0 years, male, white, stage:'--, dead, 239 days
43.2
TCGA-27-1831-01A
0 years, male, white, stage:'--, dead, 505 days
40.7
TCGA-06-2567-01A
0 years, male, white, stage:'--, dead, 133 days
39.6
TCGA-02-2486-01A
0 years, male, white, stage:'--, dead, 618 days
37.0
TCGA-19-1390-01A
0 years, female, white, stage:'--, dead, 772 days
36.7
TCGA-06-0238-01A
0 years, male, white, stage:'--, dead, 405 days
34.4
TCGA-06-0178-01A
0 years, male, white, stage:'--, dead, 2681 days
33.4
TCGA-28-2509-01A
0 years, female, white, stage:'--, alive, 145 days
33.2
TCGA-06-0139-01A
0 years, male, white, stage:'--, dead, 362 days
32.5
TCGA-27-2524-01A
0 years, male, white, stage:'--, dead, 231 days
32.2
TCGA-12-5295-01A
0 years, female, white, stage:'--, dead, 454 days
29.1
TCGA-41-2571-01A
0 years, male, white, stage:'--, dead, 26 days
29.0
TCGA-28-5220-01A
0 years, male, white, stage:'--, dead, 388 days
26.8
TCGA-06-0219-01A
0 years, male, white, stage:'--, dead, 22 days
24.3
TCGA-27-2523-01A
0 years, male, white, stage:'--, dead, 489 days
23.5
TCGA-06-2563-01A
0 years, female, white, stage:'--, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TIMP3 is not prognostic in Glioblastoma Multiforme (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
3-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
3-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
83.3
Number of samples
58
Samples
Sample
Description
TPM
AK076
N, NA, stage:NA, alive, 660 days
345.4
AK100
N, NA, stage:NA, alive, 960 days
190.2
AK178
N, NA, stage:NA, dead, 240 days
169.8
AK089
N, NA, stage:NA, dead, 330 days
156.5
AK117
N, NA, stage:NA, dead, 210 days
154.6
AK079
N, NA, stage:NA, dead, 210 days
149.3
AK098
N, NA, stage:NA, dead, 660 days
134.2
AK226
N, NA, stage:NA, dead, 360 days
133.7
AK124
N, NA, stage:NA, alive, 1920 days
133.6
AK183
N, NA, stage:NA, alive, 360 days
132.7
AK133
N, NA, stage:NA, dead, 360 days
129.6
AK158
N, NA, stage:NA, dead, 360 days
117.0
AK199
N, NA, stage:NA, alive, 1860 days
116.6
AK103
N, NA, stage:NA, alive, 1320 days
111.5
AK066
N, NA, stage:NA, alive, 960 days
101.4
AK035
N, NA, stage:NA, dead, 210 days
98.9
AK188
N, NA, stage:NA, alive, 420 days
95.0
AK218
N, NA, stage:NA, dead, 180 days
87.1
AK071
N, NA, stage:NA, dead, 540 days
86.5
AK091
N, NA, stage:NA, dead, 210 days
86.3
AK102
N, NA, stage:NA, alive, 1740 days
84.7
AK055
N, NA, stage:NA, dead, 240 days
82.9
AK149
N, NA, stage:NA, dead, 420 days
82.4
AK195
N, NA, stage:NA, dead, 390 days
80.2
AK053
N, NA, stage:NA, dead, 300 days
78.7
AK041
N, NA, stage:NA, alive, 810 days
77.6
AK099
N, NA, stage:NA, dead, 420 days
74.7
AK134
N, NA, stage:NA, dead, 360 days
69.5
AK068
N, NA, stage:NA, alive, 360 days
69.4
AK074
N, NA, stage:NA, alive, 300 days
69.1
AK165
N, NA, stage:NA, alive, 360 days
68.7
AK231
N, NA, stage:NA, dead, 240 days
68.7
AK173
N, NA, stage:NA, dead, 180 days
66.8
AK072
N, NA, stage:NA, dead, 150 days
65.6
AK003
N, NA, stage:NA, dead, 600 days
62.9
AK139
N, NA, stage:NA, dead, 270 days
62.5
AK030
N, NA, stage:NA, dead, 120 days
61.4
AK015
N, NA, stage:NA, alive, 720 days
59.3
AK185
N, NA, stage:NA, alive, 330 days
58.0
AK167
N, NA, stage:NA, dead, 180 days
56.9
AK088
N, NA, stage:NA, dead, 360 days
55.4
AK123
N, NA, stage:NA, dead, 180 days
49.5
AK213
N, NA, stage:NA, alive, 2010 days
48.7
AK205
N, NA, stage:NA, dead, 120 days
48.4
AK227
N, NA, stage:NA, alive, 300 days
46.8
AK005
N, NA, stage:NA, dead, 240 days
43.7
AK002
N, NA, stage:NA, dead, 570 days
43.3
AK085
N, NA, stage:NA, alive, 660 days
41.6
AK216
N, NA, stage:NA, dead, 360 days
40.6
AK049
N, NA, stage:NA, dead, 180 days
40.0
AK236
N, NA, stage:NA, dead, 360 days
36.8
AK051
N, NA, stage:NA, dead, 360 days
33.9
AK142
N, NA, stage:NA, alive, 90 days
33.8
AK156
N, NA, stage:NA, dead, 330 days
33.2
AK081
N, NA, stage:NA, dead, 180 days
32.3
AK153
N, NA, stage:NA, dead, 240 days
31.0
AK006
N, NA, stage:NA, dead, 360 days
28.8
AK043
N, NA, stage:NA, alive, 660 days
17.2
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GLIOBLASTOMA MULTIFORME - Protein relative expression (CPTAC)
Number of samples
110
Samples
Sample ID
Sample type
nRPX
CPT0225760003
Tumor
2.0
CPT0087730003
Tumor
1.3
CPT0205570003
Tumor
1.2
CPT0189750004
Tumor
0.9
CPT0218670003
Tumor
0.8
CPT0206880003
Tumor
0.8
CPT0199770003
Tumor
0.7
CPT0127480003
Tumor
0.7
CPT0217060003
Tumor
0.7
CPT0087680003
Tumor
0.7
CPT0218830004
Tumor
0.6
CPT0218960004
Tumor
0.6
CPT0087570003
Tumor
0.6
CPT0189460003
Tumor
0.6
CPT0127420003
Tumor
0.5
CPT0171580008
Tumor
0.5
CPT0224390004
Tumor
0.5
CPT0217000004
Tumor
0.5
CPT0125220003
Tumor
0.5
CPT0093510003
Tumor
0.5
CPT0217880003
Tumor
0.4
CPT0079790003
Tumor
0.4
CPT0168480003
Tumor
0.4
CPT0087950003
Tumor
0.4
CPT0168080003
Tumor
0.3
CPT0189850004
Tumor
0.3
CPT0002410011
Tumor
0.3
CPT0208980003
Tumor
0.3
CPT0182580003
Tumor
0.3
CPT0123530003
Tumor
0.3
CPT0206450003
Tumor
0.3
CPT0168380003
Tumor
0.3
CPT0207090003
Tumor
0.2
CPT0206110003
Tumor
0.2
CPT0092440003
Tumor
0.2
CPT0224600003
Tumor
0.2
CPT0217190003
Tumor
0.2
CPT0162100003
Tumor
0.1
CPT0104220003
Tumor
0.1
CPT0093590003
Tumor
0.1
CPT0206000004
Tumor
0.1
CPT0218690004
Tumor
0.1
CPT0221180003
Tumor
0.1
CPT0228220003
Tumor
0.1
CPT0206330003
Tumor
0.1
CPT0205890003
Tumor
0.1
CPT0217100003
Tumor
0.1
CPT0182500003
Tumor
0.1
CPT0125510003
Tumor
0.1
CPT0167530003
Tumor
0.1
CPT0218770003
Tumor
0.1
CPT0064650003
Tumor
0.1
CPT0217430008
Tumor
0.0
CPT0168590003
Tumor
0.0
CPT0168830003
Tumor
0.0
CPT0167860004
Tumor
0.0
CPT0162140003
Tumor
0.0
CPT0168270003
Tumor
0.0
CPT0175060003
Tumor
0.0
CPT0089150003
Tumor
0.0
CPT0190240004
Tumor
0.0
CPT0167750004
Tumor
0.0
CPT0196850003
Tumor
0.0
CPT0078580003
Tumor
0.0
CPT0064890003
Tumor
-0.1
CPT0186100003
Tumor
-0.1
CPT0189250003
Tumor
-0.1
CPT0224540004
Tumor
-0.1
CPT0206780003
Tumor
-0.1
CPT0218330004
Tumor
-0.1
CPT0224330003
Tumor
-0.1
CPT0189650004
Tumor
-0.1
CPT0162020003
Tumor
-0.1
CPT0205670004
Tumor
-0.1
CPT0218890004
Tumor
-0.2
CPT0204410003
Normal
-0.2
CPT0206670004
Tumor
-0.2
CPT0219080004
Tumor
-0.2
CPT0161730003
Tumor
-0.2
CPT0168720003
Tumor
-0.2
CPT0204420003
Normal
-0.3
CPT0190360004
Tumor
-0.3
CPT0093450003
Tumor
-0.3
CPT0204360003
Normal
-0.3
CPT0093550003
Tumor
-0.3
CPT0204350003
Normal
-0.3
CPT0225730003
Tumor
-0.3
CPT0204380003
Normal
-0.4
CPT0167640003
Tumor
-0.4
CPT0206230003
Tumor
-0.4
CPT0204400003
Normal
-0.4
CPT0217710008
Tumor
-0.4
CPT0209440003
Tumor
-0.5
CPT0189570004
Tumor
-0.5
CPT0167970003
Tumor
-0.5
CPT0205780003
Tumor
-0.5
CPT0201710003
Tumor
-0.5
CPT0204340003
Normal
-0.5
CPT0207030003
Tumor
-0.5
CPT0204330003
Normal
-0.6
CPT0104330003
Tumor
-0.6
CPT0093360003
Tumor
-0.6
CPT0071100003
Tumor
-0.6
CPT0216920008
Tumor
-0.6
CPT0182550003
Tumor
-0.7
CPT0125570003
Tumor
-0.7
CPT0205450004
Tumor
-0.7
CPT0204370003
Normal
-0.7
CPT0206560003
Tumor
-1.1
CPT0204390003
Normal
-1.1
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GLIOMA - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.