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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIOBP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
152.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
134.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
133.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
120.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
112.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
110.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
101.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
94.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
93.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
93.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
87.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
79.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
79.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
78.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
77.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
76.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
74.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
74.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
71.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
71.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
69.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
67.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
66.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
66.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
66.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
65.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
63.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
60.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
59.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
59.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
59.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
58.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
58.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
58.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
57.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
55.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
54.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
53.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
51.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
50.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
50.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
50.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
49.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
48.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
44.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
44.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
44.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
43.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
43.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
43.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
41.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
39.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
38.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
38.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
38.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
35.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
34.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
33.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
29.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
27.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
26.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
25.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIOBP is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
111.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
103.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
99.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
93.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
92.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
91.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
90.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
89.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
86.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
85.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
84.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
82.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
80.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
79.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
79.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
79.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
78.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
78.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
77.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
77.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
77.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
76.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
76.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
76.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
76.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
76.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
76.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
75.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
74.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
74.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
73.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
73.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
73.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
73.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
71.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
71.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
71.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
71.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
70.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
70.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
69.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
69.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
69.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
68.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
68.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
68.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
67.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
66.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
66.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
66.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
66.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
65.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
64.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
64.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
64.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
64.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
64.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
63.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
63.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
63.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
63.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
62.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
62.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
62.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
62.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
62.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
61.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
61.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
61.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
60.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
60.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
60.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
60.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
60.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
60.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
60.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
60.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
60.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
60.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
60.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
59.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
59.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
58.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
58.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
57.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
57.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
57.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
57.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
57.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
57.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
57.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
56.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
56.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
56.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
56.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
56.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
55.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
55.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
55.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
55.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
55.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
55.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
55.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
55.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
55.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
55.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
55.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
54.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
54.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
54.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
54.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
54.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
54.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
54.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
54.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
54.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
53.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
53.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
53.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
53.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
53.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
53.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
53.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
53.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
53.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
53.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
53.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
52.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
52.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
52.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
52.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
52.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
52.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
52.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
52.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
51.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
51.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
51.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
51.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
51.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
51.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
51.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
51.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
51.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
50.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
50.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
50.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
50.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
50.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
50.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
50.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
50.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
50.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
49.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
49.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
49.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
49.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
49.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
49.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
49.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
49.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
48.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
48.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
48.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
48.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
48.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
48.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
48.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
48.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
48.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
48.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
47.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
47.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
47.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
47.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
47.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
47.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
47.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
47.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
47.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
47.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
46.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
46.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
46.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
46.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
46.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
46.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
46.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
46.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
46.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
46.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
45.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
45.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
45.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
45.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
45.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
45.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
45.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
45.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
45.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
45.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
45.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
44.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
44.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
44.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
44.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
44.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
44.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
44.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
44.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
44.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
44.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
43.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
43.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
43.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
43.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
43.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
43.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
43.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
43.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
43.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
43.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
43.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
43.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
43.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
43.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
43.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
42.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
42.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
42.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
42.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
42.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
42.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
42.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
41.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
41.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
41.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
41.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
41.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
41.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
41.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
41.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
41.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
41.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
40.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
40.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
40.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
40.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
40.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
40.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
40.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
40.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
40.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
40.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
39.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
39.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
39.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
39.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
39.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
39.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
39.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
39.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
39.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
39.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
39.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
39.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
39.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
38.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
38.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
38.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
38.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
38.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
37.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
37.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
37.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
37.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
37.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
37.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
37.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
37.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
37.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
36.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
36.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
36.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
36.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
36.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
36.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
36.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
36.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
36.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
36.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
35.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
35.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
35.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
35.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
35.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
35.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
35.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
35.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
34.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
34.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
34.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
34.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
34.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
34.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
34.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
34.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
34.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
34.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
34.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
34.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
33.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
33.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
33.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
33.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
33.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
33.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
33.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
33.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
32.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
32.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
32.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
32.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
32.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
32.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
32.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
31.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
31.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
31.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
31.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
31.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
31.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
31.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
31.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
30.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
30.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
30.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
30.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
29.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
29.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
29.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
29.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
29.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
29.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
29.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
29.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
28.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
28.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
28.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
28.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
28.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
28.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
28.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
28.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
28.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
28.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
28.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
27.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
27.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
27.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
27.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
27.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
27.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
26.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
26.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
26.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
26.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
25.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
25.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
25.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
25.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
25.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
24.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
24.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
23.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
23.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
22.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
22.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
21.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
21.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
21.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
20.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
19.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
19.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
18.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIOBP is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
120.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
74.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
70.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
70.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
67.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
66.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
65.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
65.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
64.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
64.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
63.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
63.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
63.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
62.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
61.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
59.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
59.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
59.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
58.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
58.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
57.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
57.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
57.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
56.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
56.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
55.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
55.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
53.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
53.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
53.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
53.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
52.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
52.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
51.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
51.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
49.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
49.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
48.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
48.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
48.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
48.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
48.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
48.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
47.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
47.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
46.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
45.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
45.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
45.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
45.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
43.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
43.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
42.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
41.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
41.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
41.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
41.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
41.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
40.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
40.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
40.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
36.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
34.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
33.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
32.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
32.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
32.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
31.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
30.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
29.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
27.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
27.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
26.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
26.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
23.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIOBP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
290.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
225.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
211.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
210.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
205.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
198.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
189.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
187.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
180.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
176.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
171.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
167.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
163.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
159.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
155.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
155.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
153.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
152.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
150.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
149.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
143.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
141.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
139.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
139.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
137.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
132.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
131.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
126.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
124.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
123.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
123.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
122.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
122.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
120.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
120.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
114.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
113.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
110.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
110.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
110.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
110.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
109.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
107.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
107.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
106.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
105.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
105.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
105.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
105.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
104.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
102.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
102.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
100.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
98.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
98.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
98.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
98.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
98.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
96.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
96.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
94.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
94.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
94.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
93.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
92.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
92.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
92.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
91.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
91.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
91.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
91.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
91.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
89.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
89.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
89.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
88.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
87.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
87.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
87.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
86.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
85.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
85.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
84.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
82.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
82.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
82.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
82.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
81.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
81.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
81.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
80.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
79.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
79.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
79.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
78.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
78.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
78.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
77.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
74.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
74.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
74.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
74.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
73.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
72.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
72.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
72.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
71.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
70.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
70.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
70.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
70.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
70.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
67.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
67.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
67.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
67.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
66.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
66.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
66.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
65.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
65.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
65.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
65.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
64.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
63.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
63.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
63.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
62.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
60.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
60.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
59.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
59.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
59.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
58.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
58.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
58.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
57.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
57.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
57.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
57.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
56.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
56.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
56.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
55.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
55.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
54.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
54.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
54.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
54.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
54.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
53.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
53.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
52.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
52.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
52.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
52.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
52.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
51.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
51.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
50.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
50.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
50.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
50.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
49.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
48.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
48.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
48.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
47.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
46.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
46.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
46.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
46.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
45.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
45.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
44.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
44.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
43.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
43.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
43.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
42.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
42.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
42.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
42.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
41.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
41.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
41.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
41.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
40.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
40.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
39.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
39.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
39.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
39.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
39.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
38.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
38.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
38.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
38.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
37.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
37.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
37.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
36.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
36.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
36.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
36.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
36.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
35.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
35.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
34.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
34.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
34.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
34.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
33.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
33.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
32.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
32.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
31.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
31.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
31.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
30.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
29.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
29.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
28.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
27.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
27.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
25.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
25.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
24.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
23.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
22.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
22.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
22.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
20.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
19.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
17.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
16.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
0.8
CPT0012370003
Tumor
0.7
CPT0071150004
Tumor
0.7
CPT0011240003
Tumor
0.6
CPT0077490003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0000640003
Tumor
0.6
CPT0019130003
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0001220008
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0015910003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0088900003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0069000003
Tumor
0.4
CPT0010120001
Normal
0.4
CPT0012670003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0012080003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0025050003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0012640003
Normal
0.4
CPT0079230003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0078990003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0000660001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0064370003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0002370001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0017450001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0007470001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0006730001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0086820003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0086360003
Tumor
-0.3
CPT0001350001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0015730003
Tumor
-0.3
CPT0023710001
Normal
-0.4
CPT0020120003
Tumor
-0.4
CPT0000790001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0023350003
Tumor
-0.4
CPT0012280003
Tumor
-0.5
CPT0012180003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.