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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HPS4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
43.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
35.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
34.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
30.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
29.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
23.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
22.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
21.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
20.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
17.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
17.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
14.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
14.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
13.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HPS4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
50.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
38.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
35.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
28.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
27.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
24.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
22.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
19.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
18.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
18.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
17.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
17.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
16.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
15.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
15.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
12.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
12.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
11.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
11.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
10.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
10.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
10.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
9.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
9.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
9.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
9.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
9.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
9.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
9.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
9.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
9.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
8.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
8.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
8.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
8.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
8.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
8.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
7.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
7.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
7.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
7.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
7.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
7.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
7.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
7.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
7.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
7.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
6.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
6.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
6.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
6.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
6.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
6.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
5.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
5.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
5.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
5.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
4.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
4.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
4.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
4.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
4.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
4.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
4.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
4.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
4.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
3.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
3.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
3.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
3.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
2.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
2.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HPS4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
25.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
21.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
21.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
18.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
17.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
13.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
12.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
10.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
10.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
9.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
9.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
9.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
7.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
5.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HPS4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
21.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
13.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
12.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
9.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
9.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
9.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
8.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
8.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
8.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
8.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
8.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
8.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
7.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
7.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
7.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
7.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
7.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
7.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
7.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
7.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
7.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
7.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
7.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
7.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
7.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
6.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
6.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
6.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
6.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
6.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
6.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
6.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
6.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
6.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
6.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
5.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
5.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
5.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
5.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
5.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
5.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
5.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
5.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
5.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
5.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
5.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
5.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
5.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
5.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
5.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
5.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
5.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
5.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
4.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
4.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
4.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
4.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
4.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
4.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
4.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
4.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
4.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
4.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
3.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
3.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
3.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
3.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
3.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
3.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
3.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
3.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
2.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
1.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
0.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
0.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
0.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077310003
Tumor
1.1
CPT0088970003
Tumor
1.1
CPT0007860003
Tumor
0.9
CPT0001340003
Tumor
0.8
CPT0014160003
Tumor
0.8
CPT0025050003
Tumor
0.7
CPT0002270011
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0078510003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0007320003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0077320001
Normal
0.4
CPT0092290003
Tumor
0.4
CPT0066430001
Normal
0.4
CPT0019130003
Tumor
0.4
CPT0079180003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0066480003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0006440003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0012770003
Normal
0.0
CPT0078530001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0088760003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0007470001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0076330003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0064400001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0025920001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0075130003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0084590001
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0012550003
Tumor
-0.4
CPT0018250001
Normal
-0.5
CPT0078800003
Tumor
-0.5
CPT0079300001
Normal
-0.5
CPT0075170001
Normal
-0.6
CPT0001270001
Normal
-0.6
CPT0012280003
Tumor
-0.7
CPT0012290003
Normal
-0.7
CPT0015730003
Tumor
-0.7
CPT0012640003
Normal
-0.7
CPT0001230001
Normal
-0.7
CPT0012180003
Tumor
-0.8
CPT0017850003
Tumor
-0.8
CPT0065820001
Normal
N/A
CPT0001180009
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0078830003
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0023710001
Normal
N/A
CPT0075720003
Tumor
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0088640003
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0082010001
Normal
N/A
CPT0011410003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0025290003
Tumor
N/A
CPT0077500001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
