HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:33.4 nTPM
HPA Brain:182.7 nTPM
GTEx:33.4 nTPM
FANTOM5:304.5 Scaled Tags Per Million
Pig:133.9 nTPM
Mouse:77.2 nTPM
Allen mouse:15.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 182.7
Sample id Sample description nTPM
Hippocampus
nTPM: 136.6
2621 Female, age 67, right hemisphere 161.0
1898 Male, age 80, left hemisphere 157.8
1911 Female, age 85, right hemisphere 147.5
1855 Male, age 76, left hemisphere 130.2
2529 Female, age 94, left hemisphere 113.6
2148 Female, age 91, left hemisphere 109.3
Dentate gyrus
nTPM: 133.4
1927 Female, age 91, both hemispheres 167.4
2531 Female, age 67, both hemispheres 154.4
2246 Female, age 85, both hemispheres 137.2
2010 Male, age 76, both hemispheres 124.0
2530 Female, age 94, left hemisphere 119.6
2528 Male, age 74, both hemispheres 97.9
Entorhinal gyrus
nTPM: 116.0
2613 Female, age 94, left hemisphere 193.9
1938 Female, age 85, left hemisphere 119.7
2686 Male, age 75, right hemisphere 107.8
2764 Male, age 80, right hemisphere 106.5
1787 Male, age 76, left hemisphere 86.2
2117 Female, age 91, right hemisphere 82.1
Hippocampus, CA1
nTPM: 176.7
2749 Male, age 80, left hemisphere 270.8
2527 Male, age 74, both hemispheres 180.5
2045 Male, age 76, both hemispheres 159.3
1873 Female, age 85, both hemispheres 152.4
2082 Female, age 91, right hemisphere 120.5
Hippocampus, CA2
nTPM: 119.4
1892 Male, age 76, both hemispheres 146.7
2249 Male, age 74, both hemispheres 128.1
1963 Male, age 80, left hemisphere 125.7
2437 Female, age 94, left hemisphere 118.5
2113 Female, age 91, right hemisphere 114.8
1940 Female, age 85, left hemisphere 82.2
Hippocampus, CA3
nTPM: 182.7
2137 Male, age 80, left hemisphere 261.2
2620 Female, age 94, left hemisphere 257.8
1867 Male, age 76, both hemispheres 160.8
2436 Male, age 74, both hemispheres 139.4
1891 Female, age 85, both hemispheres 138.7
2861 Female, age 67, both hemispheres 138.4
Parahippocampal cortex
nTPM: 106.1
2245 Female, age 91, both hemispheres 143.8
2018 Male, age 76, both hemispheres 130.9
2250 Female, age 67, right hemisphere 124.9
1990 Female, age 91, right hemisphere 104.0
1850 Male, age 80, both hemispheres 103.3
2693 Female, age 94, both hemispheres 103.1
2622 Female, age 67, right hemisphere 102.4
2692 Male, age 74, both hemispheres 89.7
1933 Female, age 85, both hemispheres 86.1
2532 Female, age 72, left hemisphere 73.0
Perirhinal gyrus
nTPM: 103.8
1847 Female, age 91, left hemisphere 144.9
1841 Female, age 85, right hemisphere 108.1
1794 Male, age 80, right hemisphere 98.0
2848 Male, age 76, right hemisphere 87.9
2521 Female, age 94, right hemisphere 80.1
Subiculum
nTPM: 118.1
1901 Male, age 80, both hemispheres 163.3
2438 Female, age 94, left hemisphere 132.8
1977 Female, age 85, both hemispheres 121.3
2619 Male, age 74, both hemispheres 105.8
2042 Male, age 76, both hemispheres 105.6
2729 Female, age 91, right hemisphere 79.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 81.7
Min nTPM: 1.2
Std nTPM: 17.0
Median nTPM: 31.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 81.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 79.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 78.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 77.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 75.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 73.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 72.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 70.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 66.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 64.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 304.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 304.5
FF:10153-102I9 76 years, female 304.7
FF:10169-103B7 60 years, female 304.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 133.9
Pig sample Sample description nTPM
Subiculum
nTPM: 71.7
Samples: 4

Max nTPM: 96.7
Min nTPM: 57.8
Sample A Female 96.7
Sample B Female 61.3
Sample C Male 71.0
Sample D Male 57.8
Dorsal hippocampus
nTPM: 133.9
Samples: 4

Max nTPM: 168.7
Min nTPM: 104.3
Sample A Female 168.7
Sample B Female 149.3
Sample C Male 113.3
Sample D Male 104.3
Entorhinal cortex
nTPM: 89.8
Samples: 4

Max nTPM: 100.7
Min nTPM: 81.6
Sample A Female 100.7
Sample B Female 83.5
Sample C Male 93.4
Sample D Male 81.6
Ventral hippocampus
nTPM: 128.9
Samples: 4

Max nTPM: 158.2
Min nTPM: 79.9
Sample A Female 142.0
Sample B Female 79.9
Sample C Male 135.6
Sample D Male 158.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 77.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.6
Samples: 4

Max nTPM: 83.0
Min nTPM: 52.0
Sample A Male 59.4
Sample B Male 52.0
Sample C Female 59.8
Sample D Female 83.0
Hippocampal formation
nTPM: 77.2
Samples: 4

Max nTPM: 98.8
Min nTPM: 55.6
Sample A Male 55.6
Sample B Male 90.5
Sample C Female 98.8
Sample D Female 63.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.3
73929583 Antisense, RP_051214_03_G05, Mouse strain C57BL/6J (56 days, male) 16.0
69873600 Antisense, RP_050512_01_F01, Mouse strain C57BL/6J (56 days, male) 14.5

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