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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GGA1 is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
254
Samples
Sample
Description
TPM
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
52.2
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
49.4
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
47.3
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
46.0
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
44.7
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
43.9
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
42.1
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
39.5
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
37.9
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
37.8
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
37.4
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
37.3
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
37.3
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
37.1
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
36.8
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
36.6
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
36.0
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
35.8
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
35.6
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
34.9
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
34.8
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
34.1
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
34.1
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
33.9
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
33.8
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
33.7
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
33.3
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
33.3
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
33.3
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
33.2
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
33.1
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
32.8
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
32.8
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
32.7
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
32.2
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
32.0
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
31.9
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
31.9
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
31.7
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
31.7
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
31.7
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
31.5
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
31.5
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
31.4
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
31.4
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
31.4
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
31.3
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
31.3
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
31.3
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
31.2
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
30.8
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
30.7
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
30.5
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
30.4
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
30.4
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
30.3
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
30.3
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
30.2
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
30.0
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
29.9
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
29.9
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
29.8
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
29.7
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
29.7
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
29.6
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
29.6
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
29.6
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
29.5
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
29.4
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
29.4
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
29.3
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
29.1
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
29.0
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
28.9
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
28.5
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
28.4
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
28.3
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
28.3
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
28.3
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
28.3
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
28.2
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
28.1
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
28.0
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
28.0
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
27.9
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
27.8
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
27.8
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
27.6
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
27.4
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
27.3
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
27.3
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
27.1
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
27.1
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
27.1
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
27.0
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
27.0
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
26.9
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
26.7
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
26.7
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
26.4
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
26.4
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
26.3
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
26.3
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
26.2
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
26.2
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
26.1
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
26.0
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
26.0
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
25.9
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
25.6
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
25.6
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
25.6
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
25.6
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
25.5
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
25.2
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
25.2
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
25.1
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
25.0
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
25.0
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
25.0
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
24.9
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
24.9
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
24.7
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
24.6
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
24.5
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
24.5
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
24.5
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
24.4
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
24.4
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
24.4
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
24.3
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
24.2
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
24.0
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
23.8
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
23.8
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
23.8
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.7
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
23.7
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
23.6
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
23.4
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
23.4
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
23.3
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
23.3
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
23.3
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
23.2
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
23.2
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
23.1
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
23.1
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
23.1
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
23.1
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
23.1
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
23.0
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
22.9
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
22.9
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
22.8
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
22.7
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
22.6
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
22.6
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
22.5
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
22.4
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
22.4
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
22.4
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
22.4
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
22.4
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
22.3
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
22.3
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
22.2
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
21.9
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
21.9
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
21.9
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
21.9
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
21.8
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
21.7
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
21.7
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
21.7
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
21.7
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
21.7
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
21.6
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
21.6
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
21.5
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
21.3
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
21.2
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
21.2
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
21.2
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
21.2
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
21.2
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
21.1
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
21.0
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
21.0
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
21.0
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
20.9
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
20.8
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
20.7
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
20.6
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
20.5
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
20.3
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
20.3
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
20.2
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
20.2
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
20.2
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
19.9
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
19.9
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
19.7
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
19.7
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
19.6
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
19.6
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
19.5
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
19.4
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
19.1
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
18.9
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
18.9
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
18.9
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
18.8
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
18.8
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
18.8
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
18.6
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
18.6
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
18.5
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
18.5
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
18.2
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
18.2
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
18.1
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
18.1
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
17.9
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
17.9
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
17.7
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
17.6
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
17.5
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
17.5
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
17.4
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
17.3
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
17.1
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
17.1
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
17.0
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
16.8
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
16.7
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
16.7
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
16.3
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
16.3
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
16.2
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
15.9
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
15.9
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
15.6
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
15.4
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
15.2
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
15.1
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
15.1
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
14.9
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
14.3
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
14.2
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
13.4
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
13.2
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
11.8
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GGA1 is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.3
Number of samples
486
Samples
Sample
Description
TPM
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
52.7
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
51.1
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
49.4
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
48.6
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
47.9
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
47.3
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
46.9
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
44.8
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
44.6
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
43.4
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
43.1
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
41.8
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
41.7
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
41.5
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
41.4
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
41.4
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
40.6
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
40.6
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
40.5
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
40.4
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
40.2
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
39.8
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
39.8
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
39.5
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
39.3
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
39.3
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
38.9
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
38.5
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
38.2
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
38.2
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
38.0
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
37.7
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
37.6
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
37.4
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
37.3
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
37.3
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
37.1
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
37.1
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
37.0
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
37.0
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
36.8
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
36.7
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
36.6
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
36.5
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
36.4
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
36.3
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
36.1
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
36.1
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
36.1
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
36.0
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
35.8
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
35.5
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
35.4
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
35.3
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
35.2
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
35.2
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
35.1
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
35.1
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
35.0
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
34.9
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
34.8
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
34.7
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
34.5
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
34.5
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
34.4
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
34.4
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
34.3
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
34.2
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
34.1
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
34.1
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
34.0
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
34.0
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
34.0
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
33.9
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
33.8
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
33.7
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
33.4
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
33.4
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
33.2
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
33.2
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
33.2
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
33.1
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
33.0
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
33.0
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
32.9
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
32.9
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
32.9
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
32.9
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
32.8
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
32.7
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
32.4
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
32.3
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
32.2
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
32.2
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
32.1
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
32.0
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
32.0
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
31.9
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
31.9
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
31.8
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
31.8
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
31.7
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
31.6
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
31.6
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
31.5
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
31.5
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
31.5
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
31.4
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
31.4
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
31.3
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
31.3
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
31.2
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
31.2
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
31.2
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
31.2
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
31.2
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
31.2
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
31.1
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
31.1
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
31.1
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
31.1
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
31.0
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
30.9
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
30.8
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
30.8
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
30.7
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
30.7
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
30.7
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
30.6
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
30.6
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
30.6
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
30.4
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
30.4
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
30.4
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
30.4
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
30.4
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
30.4
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
30.4
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
30.3
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
30.3
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
30.3
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
30.3
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
30.2
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
30.2
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
30.2
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
30.2
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
30.2
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
30.1
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
30.1
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
30.1
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
30.1
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
29.9
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
29.8
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
29.8
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
29.8
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
29.8
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
29.8
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
29.7
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
29.7
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
29.7
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
29.6
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
29.5
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
29.5
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
29.5
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
29.5
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
29.5
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
29.4
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
29.3
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
29.3
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
29.3
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
29.3
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
29.3
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
29.3
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
29.3
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
29.3
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
29.2
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
29.2
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
29.2
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
29.2
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
29.1
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
29.1
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
29.1
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
29.1
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
28.9
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
28.9
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
28.8
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
28.8
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
28.8
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
28.8
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
28.6
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
28.5
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
28.5
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
28.5
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
28.5
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
28.4
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
28.4
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
28.3
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
28.3
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
28.2
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
28.2
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
28.2
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
28.2
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
28.2
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
28.1
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
28.1
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
28.1
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
28.1
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
28.0
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
28.0
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
28.0
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
28.0
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
27.9
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
27.9
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
27.8
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
27.8
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
27.7
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
27.7
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
27.7
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
27.7
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
27.7
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
27.6
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
27.5
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
27.4
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
27.4
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
27.3
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
27.3
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
27.3
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
27.2
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
27.1
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
27.1
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
27.1
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
27.1
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
27.1
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
27.1
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
27.0
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
26.9
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
26.9
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
26.9
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
26.8
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
26.8
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
26.6
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
26.6
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
26.6
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
26.6
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
26.5
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
26.5
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
26.5
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
26.4
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
26.4
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
26.4
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
26.4
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
26.3
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
26.1
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
26.1
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
26.1
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
26.1
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
26.0
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
26.0
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
26.0
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
26.0
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
26.0
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
26.0
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
26.0
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
25.9
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
25.9
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
25.9
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
25.9
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
25.9
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
25.8
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
25.8
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
25.8
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
25.8
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
25.6
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
25.6
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
25.6
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
25.6
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
25.5
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
25.5
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
25.5
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
25.4
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
25.4
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
25.4
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
25.4
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
25.4
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
25.3
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
25.2
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
25.2
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
25.2
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
25.2
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
25.1
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
25.1
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
25.1
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
25.0
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
25.0
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
25.0
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
25.0
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
24.9
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
24.9
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
24.8
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
24.8
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
24.8
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
24.8
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
24.7
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
24.7
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
24.7
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
24.6
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
24.6
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
24.6
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
24.6
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
24.6
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
24.6
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
24.6
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
24.6
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
24.4
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
24.4
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
24.4
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
24.4
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
24.3
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
24.3
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
24.2
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
24.2
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
24.2
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
24.1
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
24.1
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
24.0
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
24.0
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
24.0
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
24.0
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
23.9
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
23.9
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
23.9
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
23.9
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
23.8
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
23.8
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
23.7
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
23.6
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
23.6
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
23.6
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
23.6
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
23.6
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
23.6
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
23.5
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
23.5
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
23.4
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
23.4
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
23.3
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
23.2
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
23.2
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
23.2
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
23.1
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
23.1
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
23.0
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
23.0
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
23.0
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
22.9
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
22.9
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
22.9
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
22.9
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
22.9
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
22.8
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
22.8
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
22.7
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
22.7
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
22.7
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
22.7
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
22.6
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
22.6
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
22.6
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
22.5
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
22.5
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
22.4
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
22.4
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
22.4
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
22.4
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
22.4
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
22.4
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
22.3
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
22.3
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
22.3
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
22.3
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
22.3
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
22.3
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
22.3
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
22.2
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
22.1
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
22.0
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
22.0
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
22.0
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
22.0
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
22.0
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
21.9
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
21.9
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
21.9
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
21.9
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
21.8
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
21.8
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
21.8
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
21.8
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
21.7
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
21.7
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
21.6
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
21.6
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
21.6
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
21.5
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
21.5
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
21.5
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
21.5
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
21.5
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
21.5
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
21.5
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
21.4
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
21.3
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
21.3
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
21.3
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
21.3
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
21.2
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
21.2
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
21.2
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
21.1
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
21.1
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
21.1
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
21.0
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
21.0
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
20.9
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
20.8
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
20.8
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
20.7
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
20.6
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
20.5
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
20.5
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
20.5
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
20.4
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
20.4
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
20.4
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
20.4
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
20.4
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
20.4
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
20.3
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
20.3
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
20.2
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
20.2
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
20.1
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
20.1
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
20.1
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
20.0
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
20.0
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
20.0
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
19.8
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
19.7
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
19.6
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
19.6
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
19.5
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
19.4
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
19.4
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
19.3
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
19.1
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
19.0
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
18.7
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
18.7
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
18.5
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
18.4
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
18.0
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
18.0
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
17.9
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
17.9
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
17.8
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
17.7
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
17.5
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
17.4
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
17.4
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
17.2
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
17.1
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
17.0
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
16.7
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
16.3
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
16.2
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
15.9
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
15.3
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
15.2
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
15.0
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
14.9
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
14.6
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
13.8
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
7.8
U1384
0 years, male, NA, stage:T4N1M0, alive, 1319 days
0.8
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GGA1 is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
88
Samples
Sample
Description
TPM
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
41.9
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
38.3
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
37.6
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
36.0
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
32.6
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
31.0
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
30.8
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
30.7
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
30.7
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
30.6
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
29.7
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
29.2
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
29.2
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
28.5
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
28.4
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
27.7
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
27.5
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
27.0
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
27.0
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
27.0
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
26.9
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
26.8
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
26.8
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
26.7
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
26.2
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
26.0
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
25.4
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
25.1
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
24.9
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
24.9
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
24.4
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
24.3
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
24.3
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
24.3
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
24.2
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
23.8
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
23.7
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
23.4
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
23.3
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
23.2
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
23.1
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
23.1
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
23.1
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
22.2
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
21.8
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
21.7
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
21.6
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
21.3
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
21.3
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
21.3
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
21.3
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
21.1
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
21.1
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
20.4
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
20.3
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
20.2
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
20.1
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
19.3
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
19.2
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
19.1
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
19.0
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
18.9
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
18.8
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
18.8
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
18.7
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
18.5
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
18.4
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
18.4
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
18.3
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
18.2
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
17.3
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
16.5
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
15.7
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
15.7
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
15.5
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
15.4
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
15.1
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
15.0
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
15.0
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
14.9
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
14.8
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
14.7
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
14.4
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
13.9
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
13.8
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
13.1
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
12.3
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GGA1 is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.9
Number of samples
207
Samples
Sample
Description
TPM
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
43.4
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
42.1
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
41.1
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
37.9
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
36.2
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
36.1
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
35.9
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
35.9
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
35.9
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
35.5
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
35.2
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
34.7
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
34.7
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
34.7
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
34.7
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
34.6
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
34.5
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
34.1
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
34.1
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
33.9
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
33.8
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
33.8
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
33.7
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
33.4
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
33.4
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
33.3
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
33.2
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
33.1
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
32.4
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
31.8
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
31.6
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
31.5
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
31.2
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
31.1
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
31.0
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
30.9
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
30.9
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
30.7
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
30.7
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
30.7
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
30.6
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
30.5
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
30.4
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
30.3
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
30.2
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
30.0
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
29.9
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
29.8
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
29.8
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
29.7
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
29.6
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
29.4
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
29.3
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
29.2
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
29.1
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
29.1
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
28.8
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
28.7
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
28.6
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
28.5
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
28.3
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
28.3
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
28.3
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
28.2
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
28.2
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
28.2
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
28.1
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
28.1
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
28.1
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
28.0
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
27.8
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
27.7
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
27.6
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
27.5
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
27.5
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
27.4
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
27.4
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
27.3
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
27.1
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
27.1
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
27.0
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
26.9
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
26.8
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
26.6
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
26.5
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
26.5
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
26.4
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
26.4
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
26.3
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
26.3
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
26.2
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
26.1
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
26.1
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
26.0
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
25.7
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
25.7
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
25.7
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
25.7
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
25.6
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
25.5
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
25.4
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
25.4
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
25.4
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
25.3
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
25.3
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
25.2
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
25.2
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
25.1
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
25.1
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
25.1
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
25.0
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
25.0
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
24.8
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
24.7
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
24.7
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
24.6
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
24.5
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
24.4
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
24.3
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
24.2
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
24.1
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
24.1
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
24.0
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
23.9
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
23.9
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
23.8
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
23.8
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
23.8
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
23.7
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
23.7
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
23.6
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
23.4
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
23.4
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
23.4
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
23.3
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
23.3
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
23.3
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
23.3
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
23.2
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
23.2
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
23.2
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
23.1
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
23.1
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
22.9
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
22.8
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
22.8
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
22.8
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
22.7
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
22.5
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
22.5
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
22.4
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
22.3
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
22.2
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
22.1
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
22.1
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
22.0
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
22.0
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
21.9
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
21.9
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
21.8
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
21.7
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
21.7
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
21.6
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
21.6
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
21.4
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
21.4
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
21.2
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
21.2
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
21.1
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
21.1
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
21.0
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
20.8
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
20.6
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
20.6
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
20.4
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
20.4
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
20.4
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
20.3
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
20.1
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
19.8
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
19.8
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
19.7
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
19.6
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
19.6
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
19.6
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
19.5
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
19.5
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
19.4
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
19.4
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
19.0
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
19.0
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
18.9
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
18.8
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
18.8
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
18.8
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
18.5
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
18.5
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
18.4
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
17.9
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
17.6
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
17.3
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
17.3
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
16.3
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
16.2
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
16.2
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
14.3
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
11.7
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
5271982c-5de1-4d6e-b414-b1f3ef_D2
Tumor
0.5
b4e91300-405e-4239-b8da-5e1a42_D2
Tumor
0.5
bc574f73-89ba-44d7-992e-82622c_D3
Tumor
0.4
176d1b96-8c6e-44fe-8a32-e15194_D2
Normal
0.4
cd89ffbb-574a-4052-bd9a-00c890_D2
Tumor
0.4
66b57abc-0d49-46bb-a390-0e11a9_D2
Tumor
0.4
e196a0b4-2a05-43de-bb30-ceb761_D2
Tumor
0.4
43bc845e-d22e-4c10-b3e8-bc54e6_D2
Normal
0.4
ea6df59d-5240-4927-b19d-d44590_D2
Tumor
0.4
a84149b1-8453-45f0-8400-d7b12f_D2
Normal
0.4
c9f0f144-47f3-4d64-b29f-bcedfa_D2
Normal
0.4
a2f03d85-5f1a-4b3e-9dbf-74e67e_D3
Tumor
0.4
65867ab1-5eab-44a8-b2bb-d27263_D2
Normal
0.4
5c70e654-583c-4dd3-ad42-0d9b39_D2
Normal
0.3
8980bb9d-65c1-41cb-9f90-dddd5f_D2
Normal
0.3
695b0b00-a86b-43c0-a6c8-50a840_D3
Tumor
0.3
c9730cb4-b52c-4ca8-9652-4509d0_D2
Tumor
0.3
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Normal
0.3
1fbb1add-4660-4ec1-b8c2-360f9f_D2
Normal
0.3
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Tumor
0.3
02cde0c0-6840-495b-9b11-007d82_D2
Normal
0.3
8fab37a4-cdf9-4ce8-9081-7b9148_D2
Normal
0.3
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Tumor
0.3
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Tumor
0.3
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Normal
0.3
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Normal
0.3
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Normal
0.3
16ac8458-5200-4302-9ad0-b311df_D2
Normal
0.3
7fd2eea8-bf99-4f97-8b9e-fb703f_D2
Normal
0.3
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Tumor
0.3
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Normal
0.3
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Normal
0.3
3e8019e8-125f-4615-a1fa-a448e9_D2
Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
63c1f7ac-b1ae-4c28-95aa-ce21e5_D2
Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Normal
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Normal
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Normal
-0.1
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Normal
-0.1
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Tumor
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Normal
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Tumor
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Normal
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Normal
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Tumor
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Tumor
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Tumor
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Normal
-0.2
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
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Tumor
-0.3
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Normal
-0.3
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Tumor
-0.3
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Normal
-0.3
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Tumor
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Tumor
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Tumor
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Tumor
-0.4
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Tumor
-0.4
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Tumor
-0.4
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Tumor
-0.4
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Tumor
-0.4
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Tumor
-0.7
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
