HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:10.9 nTPM
HPA Brain:36.1 nTPM
GTEx:10.9 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:33.8 nTPM
Allen mouse:9.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030989Antibody HPA030990
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.1
Sample id Sample description nTPM
Hippocampus
nTPM: 32.2
2529 Female, age 94, left hemisphere 35.8
1898 Male, age 80, left hemisphere 34.2
2621 Female, age 67, right hemisphere 33.1
1855 Male, age 76, left hemisphere 32.0
2148 Female, age 91, left hemisphere 31.0
1911 Female, age 85, right hemisphere 26.8
Dentate gyrus
nTPM: 31.9
2530 Female, age 94, left hemisphere 36.6
2531 Female, age 67, both hemispheres 36.5
2246 Female, age 85, both hemispheres 32.7
2528 Male, age 74, both hemispheres 31.2
2010 Male, age 76, both hemispheres 28.2
1927 Female, age 91, both hemispheres 26.6
Entorhinal gyrus
nTPM: 32.7
2686 Male, age 75, right hemisphere 37.3
2764 Male, age 80, right hemisphere 35.3
1787 Male, age 76, left hemisphere 33.1
2613 Female, age 94, left hemisphere 31.8
1938 Female, age 85, left hemisphere 31.5
2117 Female, age 91, right hemisphere 27.0
Hippocampus, CA1
nTPM: 28.0
2082 Female, age 91, right hemisphere 31.5
2527 Male, age 74, both hemispheres 28.2
1873 Female, age 85, both hemispheres 27.9
2045 Male, age 76, both hemispheres 27.4
2749 Male, age 80, left hemisphere 25.3
Hippocampus, CA2
nTPM: 31.9
2437 Female, age 94, left hemisphere 35.8
1963 Male, age 80, left hemisphere 35.6
1940 Female, age 85, left hemisphere 32.1
2113 Female, age 91, right hemisphere 31.7
1892 Male, age 76, both hemispheres 31.3
2249 Male, age 74, both hemispheres 24.8
Hippocampus, CA3
nTPM: 32.8
2861 Female, age 67, both hemispheres 42.9
2620 Female, age 94, left hemisphere 41.0
2436 Male, age 74, both hemispheres 31.0
2137 Male, age 80, left hemisphere 29.9
1867 Male, age 76, both hemispheres 27.4
1891 Female, age 85, both hemispheres 24.8
Parahippocampal cortex
nTPM: 32.9
2622 Female, age 67, right hemisphere 39.7
2245 Female, age 91, both hemispheres 35.2
1933 Female, age 85, both hemispheres 34.4
2532 Female, age 72, left hemisphere 33.6
2250 Female, age 67, right hemisphere 33.4
2018 Male, age 76, both hemispheres 33.0
1990 Female, age 91, right hemisphere 31.1
2693 Female, age 94, both hemispheres 30.6
1850 Male, age 80, both hemispheres 29.9
2692 Male, age 74, both hemispheres 28.5
Perirhinal gyrus
nTPM: 36.1
1794 Male, age 80, right hemisphere 40.6
1841 Female, age 85, right hemisphere 39.6
2848 Male, age 76, right hemisphere 37.6
1847 Female, age 91, left hemisphere 33.2
2521 Female, age 94, right hemisphere 29.5
Subiculum
nTPM: 28.4
2619 Male, age 74, both hemispheres 32.7
2729 Female, age 91, right hemisphere 32.3
1977 Female, age 85, both hemispheres 30.1
2438 Female, age 94, left hemisphere 26.9
1901 Male, age 80, both hemispheres 24.5
2042 Male, age 76, both hemispheres 24.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.9
Samples: 197

Max nTPM: 23.2
Min nTPM: 5.8
Std nTPM: 2.6
Median nTPM: 10.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 23.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 19.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 19.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 18.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 18.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 17.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 16.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 16.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 16.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 15.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10153-102I9 76 years, female 34.1
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.0
Pig sample Sample description nTPM
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 24.1
Min nTPM: 15.3
Sample A Female 24.1
Sample B Female 17.2
Sample C Male 18.2
Sample D Male 15.3
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 22.4
Min nTPM: 13.3
Sample A Female 21.4
Sample B Female 22.4
Sample C Male 13.3
Sample D Male 14.4
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 16.1
Sample A Female 17.6
Sample B Female 20.3
Sample C Male 22.4
Sample D Male 16.1
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 25.8
Min nTPM: 16.8
Sample A Female 20.6
Sample B Female 16.9
Sample C Male 25.8
Sample D Male 16.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 37.5
Min nTPM: 31.3
Sample A Male 31.3
Sample B Male 32.0
Sample C Female 34.3
Sample D Female 37.5
Hippocampal formation
nTPM: 32.6
Samples: 4

Max nTPM: 33.2
Min nTPM: 32.0
Sample A Male 32.8
Sample B Male 32.0
Sample C Female 32.4
Sample D Female 33.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.4
68845382 Antisense, RP_050224_01_F09, Mouse strain C57BL/6J (56 days, male) 9.4

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