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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RANBP1 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
183.4
Number of samples
283
Samples
Sample
Description
TPM
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
808.5
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
561.7
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
456.6
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
425.7
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
399.4
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
390.1
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
387.6
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
379.3
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
379.3
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
373.4
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
358.6
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
339.2
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
338.4
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
334.7
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
332.8
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
329.0
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
325.0
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
322.6
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
321.8
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
308.0
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
296.4
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
296.3
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
293.9
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
293.3
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
291.5
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
286.7
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
282.6
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
277.0
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
273.4
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
272.8
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
272.7
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
272.1
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
266.3
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
264.5
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
259.9
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
259.0
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
256.8
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
254.4
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
254.0
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
253.7
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
253.4
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
251.6
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
247.4
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
246.6
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
243.1
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
241.8
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
241.5
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
241.5
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
241.2
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
241.0
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
239.4
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
239.0
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
235.7
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
234.1
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
233.4
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
231.3
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
231.2
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
229.7
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
229.4
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
227.9
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
227.8
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
227.6
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
227.3
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
226.0
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
224.8
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
224.6
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
223.4
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
221.3
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
220.8
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
219.9
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
216.7
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
215.9
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
215.5
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
214.9
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
212.5
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
212.0
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
211.5
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
211.1
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
210.4
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
210.1
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
209.5
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
208.1
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
207.9
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
207.0
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
206.7
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
206.1
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
204.9
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
204.5
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
203.1
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
202.9
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
202.3
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
200.5
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
200.4
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
200.2
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
200.0
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
197.0
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
197.0
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
196.9
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
196.5
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
196.4
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
195.3
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
195.2
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
194.5
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
193.7
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
193.5
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
193.4
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
190.4
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
190.3
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
189.7
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
189.1
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
188.7
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
188.0
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
187.2
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
186.2
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
185.9
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
183.9
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
183.9
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
183.6
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
183.2
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
183.2
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
181.8
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
180.4
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
180.1
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
180.0
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
179.7
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
178.7
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
178.3
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
175.1
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
174.9
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
174.2
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
174.2
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
173.6
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
173.5
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
173.5
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
172.6
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
171.8
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
171.4
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
171.3
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
170.9
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
170.8
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
170.1
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
169.8
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
169.4
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
169.2
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
169.1
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
169.1
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
168.7
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
168.5
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
168.0
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
167.4
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
167.0
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
166.1
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
165.7
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
165.6
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
165.5
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
164.7
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
164.4
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
163.9
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
163.8
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
163.2
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
163.1
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
162.3
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
160.4
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
159.7
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
157.7
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
157.0
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
156.9
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
156.4
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
156.3
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
156.0
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
156.0
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
155.2
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
154.9
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
154.8
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
153.9
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
153.7
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
153.1
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
152.7
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
152.0
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
151.7
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
151.4
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
150.2
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
149.5
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
149.5
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
149.4
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
147.9
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
147.2
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
147.0
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
145.6
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
145.0
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
144.8
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
144.1
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
143.9
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
143.6
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
142.5
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
142.4
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
141.8
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
141.3
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
140.8
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
140.2
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
139.7
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
139.3
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
139.2
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
138.5
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
138.3
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
138.3
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
137.7
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
137.4
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
137.3
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
136.2
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
133.5
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
129.8
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
129.6
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
128.2
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
127.9
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
127.8
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
126.7
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
122.9
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
122.8
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
121.9
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
120.5
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
120.1
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
119.3
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
119.1
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
119.1
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
118.8
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
117.7
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
117.6
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
116.9
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
116.1
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
115.0
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
114.5
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
113.0
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
112.9
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
112.0
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
111.7
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
110.9
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
110.5
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
109.3
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
109.0
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
108.7
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
107.9
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
107.1
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
106.8
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
106.6
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
106.5
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
105.9
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
105.8
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
105.5
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
104.3
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
104.2
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
102.6
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
102.6
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
102.0
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
101.3
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
98.5
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
94.9
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
94.2
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
93.9
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
93.7
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
93.2
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
93.0
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
91.4
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
88.3
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
88.3
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
85.1
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
84.6
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
84.5
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
79.0
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
78.9
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
78.7
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
75.8
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
75.3
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
72.4
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
71.6
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
71.3
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
70.2
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
69.5
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
56.6
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
52.1
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
52.0
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
50.0
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
43.2
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.