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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD8 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
144.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
242.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
228.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
217.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
215.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
212.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
211.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
208.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
207.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
206.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
204.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
200.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
189.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
189.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
186.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
184.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
183.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
180.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
172.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
172.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
162.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
162.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
162.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
161.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
161.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
158.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
156.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
149.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
146.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
145.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
143.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
140.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
140.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
137.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
134.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
131.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
130.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
129.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
127.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
124.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
124.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
123.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
121.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
121.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
119.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
118.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
116.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
115.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
112.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
107.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
107.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
106.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
104.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
101.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
100.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
98.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
97.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
87.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
83.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
83.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
81.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
78.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
72.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
71.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD8 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
142.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
275.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
267.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
261.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
245.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
225.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
223.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
221.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
217.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
212.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
207.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
203.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
201.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
201.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
201.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
200.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
200.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
199.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
199.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
199.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
198.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
198.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
197.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
197.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
197.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
197.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
196.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
196.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
195.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
195.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
194.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
194.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
193.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
193.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
193.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
192.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
192.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
191.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
191.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
190.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
189.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
189.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
188.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
187.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
186.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
186.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
186.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
186.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
186.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
185.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
185.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
185.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
184.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
184.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
184.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
184.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
183.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
183.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
183.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
181.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
181.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
181.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
180.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
180.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
180.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
180.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
180.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
179.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
179.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
179.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
179.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
179.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
178.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
177.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
177.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
177.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
177.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
176.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
176.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
176.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
175.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
175.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
175.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
175.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
175.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
174.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
174.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
174.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
174.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
174.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
174.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
173.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
173.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
173.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
172.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
172.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
172.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
172.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
172.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
171.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
171.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
171.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
171.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
171.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
170.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
169.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
169.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
169.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
169.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
168.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
168.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
168.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
168.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
168.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
167.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
167.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
167.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
167.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
167.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
166.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
166.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
166.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
166.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
166.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
166.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
166.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
165.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
165.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
165.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
165.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
164.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
164.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
164.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
164.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
164.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
164.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
164.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
163.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
163.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
163.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
163.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
163.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
163.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
163.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
163.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
162.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
162.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
162.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
162.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
162.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
162.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
161.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
161.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
161.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
160.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
160.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
160.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
160.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
160.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
160.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
160.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
159.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
159.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
159.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
159.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
159.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
159.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
159.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
159.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
159.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
159.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
159.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
158.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
158.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
158.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
158.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
158.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
158.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
157.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
157.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
157.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
156.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
156.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
156.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
156.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
156.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
156.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
156.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
156.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
156.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
156.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
155.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
155.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
155.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
155.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
155.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
155.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
154.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
154.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
154.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
153.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
153.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
153.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
153.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
153.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
153.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
153.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
153.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
153.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
152.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
152.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
152.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
152.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
151.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
151.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
151.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
151.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
151.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
151.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
151.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
150.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
150.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
150.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
150.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
150.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
150.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
150.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
150.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
149.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
149.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
149.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
149.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
149.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
148.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
148.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
148.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
147.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
147.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
147.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
147.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
147.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
146.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
146.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
146.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
146.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
146.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
146.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
146.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
146.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
146.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
145.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
145.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
145.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
145.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
145.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
145.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
144.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
144.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
144.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
144.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
144.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
143.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
143.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
143.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
143.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
143.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
143.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
143.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
143.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
143.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
142.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
142.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
142.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
142.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
141.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
141.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
141.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
141.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
141.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
141.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
140.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
140.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
140.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
140.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
140.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
140.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
140.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
140.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
140.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
140.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
139.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
139.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
139.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
139.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
139.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
139.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
138.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
138.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
138.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
138.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
138.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
138.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
137.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
137.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
137.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
136.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
136.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
136.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
136.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
135.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
135.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
135.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
135.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
135.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
135.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
135.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
135.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
135.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
135.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
134.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
134.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
134.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
134.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
134.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
134.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
134.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
133.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
133.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
133.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
133.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
133.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
133.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
133.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
132.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
132.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
132.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
132.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
132.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
132.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
132.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
131.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
131.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
131.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
131.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
131.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
130.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
130.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
129.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
129.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
128.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
128.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
128.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
128.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
128.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
128.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
128.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
128.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
127.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
127.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
127.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
126.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
126.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
126.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
126.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
126.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
126.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
126.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
126.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
125.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
125.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
125.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
125.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
125.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
125.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
125.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
124.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
124.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
124.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
124.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
124.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
123.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
123.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
123.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
123.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
123.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
122.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
122.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
122.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
122.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
122.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
121.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
121.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
120.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
120.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
120.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
120.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
120.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
120.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
119.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
119.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
119.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
119.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
119.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
118.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
118.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
118.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
118.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
118.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
117.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
117.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
117.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
116.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
116.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
116.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
115.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
115.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
115.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
114.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
114.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
114.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
114.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
114.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
113.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
113.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
112.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
112.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
112.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
111.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
111.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
111.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
110.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
110.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
109.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
109.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
109.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
108.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
108.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
107.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
107.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
106.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
106.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
105.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
105.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
104.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
104.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
104.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
104.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
103.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
103.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
103.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
102.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
102.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
102.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
102.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
102.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
102.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
101.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
101.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
101.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
101.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
101.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
99.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
98.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
97.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
95.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
95.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
94.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
94.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
94.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
93.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
92.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
91.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
91.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
90.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
90.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
89.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
88.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
87.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
86.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
86.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
86.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
86.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
86.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
85.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
84.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
84.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
83.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
83.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
82.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
82.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
81.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
81.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
80.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
80.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
79.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
78.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
78.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
77.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
76.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
76.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
75.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
74.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
73.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
72.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
72.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
70.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
69.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
68.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
68.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
67.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
62.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
59.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
59.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
59.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
58.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
57.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
55.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
52.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
50.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
40.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
34.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD8 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
423.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
229.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
177.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
167.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
163.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
162.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
161.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
159.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
158.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
158.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
156.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
154.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
153.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
152.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
150.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
150.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
149.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
148.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
144.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
142.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
138.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
137.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
137.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
137.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
136.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
132.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
132.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
131.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
131.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
129.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
128.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
128.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
127.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
126.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
125.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
124.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
124.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
124.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
123.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
122.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
121.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
121.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
120.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
120.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
120.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
118.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
118.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
118.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
118.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
117.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
117.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
116.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
115.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
115.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
113.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
113.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
113.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
113.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
112.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
112.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
110.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
109.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
109.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
109.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
109.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
108.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
108.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
107.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
106.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
106.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
106.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
106.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
105.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
105.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
105.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
104.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
104.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
103.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
101.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
101.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
100.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
100.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
100.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
100.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
99.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
98.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
97.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
97.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
97.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
96.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
93.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
93.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
90.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
85.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
84.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
83.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
73.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
72.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
63.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD8 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
308.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
302.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
279.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
262.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
262.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
256.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
252.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
250.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
240.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
234.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
234.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
234.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
231.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
228.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
227.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
224.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
215.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
214.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
213.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
210.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
204.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
197.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
197.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
193.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
190.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
187.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
186.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
183.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
183.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
182.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
180.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
179.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
178.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
175.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
175.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
173.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
172.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
170.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
169.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
168.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
167.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
166.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
165.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
164.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
163.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
162.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
161.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
161.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
160.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
159.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
159.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
159.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
158.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
157.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
157.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
156.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
156.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
154.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
153.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
153.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
152.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
151.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
151.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
151.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
150.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
150.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
150.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
150.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
149.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
148.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
148.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
147.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
146.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
145.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
145.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
144.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
143.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
142.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
142.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
141.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
141.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
139.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
139.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
139.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
139.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
138.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
138.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
137.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
137.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
136.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
136.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
136.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
135.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
135.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
134.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
134.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
133.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
132.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
132.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
131.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
130.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
130.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
130.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
129.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
129.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
128.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
128.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
127.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
126.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
125.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
125.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
125.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
125.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
125.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
124.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
123.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
123.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
123.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
123.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
123.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
122.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
122.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
121.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
121.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
120.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
120.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
120.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
120.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
120.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
120.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
119.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
119.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
118.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
118.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
117.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
116.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
116.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
116.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
116.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
115.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
115.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
114.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
114.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
114.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
114.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
114.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
113.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
113.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
113.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
113.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
112.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
112.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
111.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
110.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
110.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
109.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
109.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
109.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
109.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
109.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
109.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
108.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
108.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
108.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
108.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
108.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
108.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
107.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
107.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
107.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
107.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
106.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
106.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
106.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
105.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
105.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
105.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
105.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
105.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
104.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
104.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
104.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
103.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
103.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
102.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
102.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
102.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
102.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
102.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
101.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
100.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
99.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
99.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
99.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
99.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
98.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
98.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
98.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
97.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
96.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
96.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
96.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
96.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
94.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
94.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
94.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
93.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
93.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
93.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
92.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
91.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
91.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
91.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
91.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
90.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
90.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
89.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
89.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
89.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
88.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
88.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
87.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
87.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
87.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
87.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
86.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
86.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
85.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
84.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
84.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
82.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
82.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
81.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
80.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
79.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
79.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
78.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
78.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
78.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
77.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
77.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
77.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
77.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
76.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
76.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
76.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
75.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
75.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
75.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
74.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
73.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
72.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
71.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
71.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
71.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
71.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
70.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
70.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
70.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
69.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
67.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
67.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
66.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
65.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
64.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
63.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
60.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
59.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
57.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
57.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
57.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
56.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
54.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
53.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
53.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
52.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
46.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
44.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
44.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
43.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
41.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
35.4
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
0.7
CPT0012550003
Tumor
0.6
CPT0088970003
Tumor
0.5
CPT0002270011
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0081880003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0077110003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0023350003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0086360003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0078800003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0009080003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0077320001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0079300001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0020120003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0007320003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0065430003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0089460004
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0025580004
Tumor
-0.4
CPT0015910003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
