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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
324.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
251.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
217.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
213.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
185.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
161.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
154.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
146.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
141.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
135.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
124.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
124.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
121.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
101.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
101.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
96.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
95.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
94.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
71.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
69.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
66.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
63.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
63.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
60.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
59.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
58.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
56.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
49.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
38.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
36.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
35.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
34.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
32.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
32.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
32.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
29.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
28.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
27.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
13.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
11.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
8.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
107.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
566.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
504.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
418.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
401.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
393.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
368.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
362.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
356.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
341.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
340.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
330.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
322.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
319.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
313.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
304.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
300.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
300.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
292.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
286.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
285.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
283.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
282.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
278.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
277.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
274.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
267.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
267.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
262.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
260.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
259.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
256.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
251.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
245.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
243.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
242.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
236.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
234.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
230.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
230.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
230.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
222.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
222.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
219.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
217.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
217.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
208.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
206.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
205.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
203.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
202.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
200.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
199.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
197.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
196.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
193.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
193.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
193.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
193.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
193.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
191.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
190.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
188.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
188.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
185.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
185.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
185.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
183.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
182.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
182.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
181.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
181.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
180.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
179.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
178.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
177.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
176.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
175.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
174.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
172.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
172.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
172.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
172.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
171.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
171.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
171.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
170.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
170.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
169.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
168.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
167.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
165.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
162.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
161.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
161.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
160.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
160.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
159.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
159.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
157.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
156.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
156.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
155.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
155.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
155.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
155.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
155.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
154.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
153.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
153.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
153.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
153.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
152.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
152.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
151.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
151.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
150.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
150.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
150.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
150.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
149.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
149.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
149.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
148.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
148.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
148.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
148.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
146.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
146.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
146.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
146.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
145.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
145.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
144.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
144.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
143.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
143.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
143.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
142.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
142.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
141.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
140.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
140.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
140.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
139.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
139.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
139.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
139.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
137.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
136.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
136.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
135.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
135.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
133.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
133.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
132.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
131.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
130.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
130.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
129.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
129.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
129.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
129.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
129.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
129.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
129.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
127.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
127.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
126.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
125.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
125.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
124.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
124.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
124.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
123.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
123.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
123.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
122.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
122.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
121.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
121.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
120.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
120.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
119.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
119.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
118.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
118.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
117.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
117.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
116.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
115.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
115.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
114.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
114.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
113.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
113.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
113.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
112.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
111.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
111.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
111.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
110.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
110.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
109.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
108.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
108.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
108.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
107.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
107.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
106.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
106.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
106.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
106.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
106.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
104.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
104.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
104.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
104.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
103.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
103.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
103.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
103.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
102.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
102.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
102.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
102.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
102.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
101.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
101.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
101.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
99.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
98.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
98.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
97.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
97.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
97.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
96.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
96.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
96.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
96.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
95.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
95.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
94.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
94.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
93.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
93.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
92.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
92.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
92.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
92.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
91.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
91.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
91.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
91.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
90.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
90.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
90.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
89.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
89.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
89.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
89.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
89.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
89.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
89.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
88.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
88.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
87.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
86.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
86.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
86.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
85.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
85.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
85.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
85.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
85.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
85.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
84.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
84.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
84.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
84.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
84.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
83.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
83.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
83.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
83.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
83.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
82.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
82.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
82.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
82.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
81.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
81.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
81.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
81.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
81.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
80.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
80.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
80.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
79.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
79.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
79.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
79.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
78.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
78.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
78.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
78.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
77.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
77.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
76.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
75.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
75.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
75.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
75.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
75.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
74.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
73.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
73.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
73.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
73.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
73.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
73.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
72.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
72.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
71.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
71.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
70.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
69.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
69.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
69.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
69.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
69.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
68.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
68.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
68.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
68.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
68.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
67.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
67.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
67.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
67.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
67.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
67.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
66.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
66.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
66.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
66.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
65.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
65.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
65.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
64.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
64.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
64.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
64.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
63.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
63.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
63.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
63.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
62.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
62.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
62.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
62.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
62.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
62.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
62.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
61.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
61.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
61.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
61.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
61.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
61.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
60.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
60.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
60.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
59.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
59.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
59.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
58.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
58.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
57.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
57.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
56.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
56.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
55.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
55.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
54.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
54.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
54.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
54.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
53.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
52.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
52.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
52.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
52.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
52.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
51.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
51.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
51.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
51.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
51.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
51.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
50.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
50.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
50.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
50.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
49.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
49.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
49.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
49.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
48.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
48.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
47.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
47.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
47.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
47.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
47.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
47.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
47.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
46.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
45.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
45.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
44.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
44.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
44.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
44.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
43.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
43.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
43.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
43.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
43.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
42.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
42.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
41.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
41.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
40.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
40.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
39.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
38.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
38.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
38.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
38.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
37.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
37.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
35.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
35.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
34.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
33.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
32.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
31.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
31.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
31.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
31.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
30.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
29.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
29.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
29.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
28.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
27.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
26.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
26.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
26.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
23.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
22.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
21.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
21.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
17.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
16.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
8.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
8.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
7.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
6.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
6.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
4.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
4.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
3.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
138.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
593.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
372.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
369.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
358.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
340.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
299.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
292.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
288.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
282.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
278.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
257.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
245.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
235.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
230.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
224.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
211.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
207.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
205.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
198.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
197.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
194.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
180.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
168.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
167.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
166.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
165.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
164.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
164.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
160.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
160.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
159.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
151.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
151.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
150.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
149.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
144.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
141.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
140.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
135.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
134.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
134.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
134.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
128.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
128.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
125.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
124.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
124.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
124.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
123.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
118.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
113.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
112.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
111.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
107.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
107.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
106.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
104.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
104.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
103.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
103.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
99.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
98.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
98.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
98.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
96.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
95.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
95.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
89.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
87.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
86.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
82.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
81.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
79.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
79.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
76.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
73.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
73.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
73.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
70.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
70.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
69.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
66.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
66.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
65.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
62.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
62.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
56.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
52.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
41.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
40.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
23.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCD is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
304.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
267.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
150.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
145.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
144.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
114.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
102.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
101.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
99.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
92.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
89.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
83.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
80.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
79.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
78.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
76.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
75.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
74.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
73.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
72.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
71.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
71.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
66.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
64.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
64.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
63.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
62.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
62.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
61.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
58.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
55.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
55.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
55.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
54.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
53.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
53.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
52.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
52.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
51.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
51.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
50.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
50.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
50.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
50.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
49.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
49.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
46.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
46.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
44.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
44.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
43.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
43.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
43.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
42.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
41.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
41.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
41.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
41.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
40.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
39.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
38.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
38.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
38.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
38.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
38.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
36.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
36.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
35.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
35.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
35.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
35.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
35.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
34.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
34.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
34.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
34.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
32.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
32.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
32.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
31.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
31.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
30.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
29.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
29.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
29.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
27.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
26.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
25.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
24.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
24.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
23.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
23.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
23.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
23.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
22.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
22.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
21.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
21.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
19.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
17.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
14.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
10.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
10.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
8.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
7.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
7.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
6.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
6.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
4.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
3.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
2.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
4.1
CPT0023350003
Tumor
2.1
CPT0088690003
Tumor
1.5
CPT0010160003
Tumor
1.5
CPT0079410003
Tumor
1.2
CPT0025880003
Tumor
1.2
CPT0088970003
Tumor
1.2
CPT0077110003
Tumor
1.1
CPT0019130003
Tumor
1.1
CPT0025230003
Tumor
1.0
CPT0086820003
Tumor
1.0
CPT0015810003
Tumor
1.0
CPT0079270003
Tumor
1.0
CPT0078800003
Tumor
0.9
CPT0085670003
Tumor
0.9
CPT0069160003
Tumor
0.9
CPT0089460004
Tumor
0.9
CPT0025110003
Tumor
0.9
CPT0012080003
Tumor
0.9
CPT0026410003
Tumor
0.8
CPT0014450004
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0079480003
Tumor
0.7
CPT0006900003
Tumor
0.7
CPT0088480003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0078930003
Tumor
0.7
CPT0006630003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0089020003
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0086030003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0063630003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0025050003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0086950003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0077490003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0086360003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0015910003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0075720003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0064370003
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0063320003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0010120001
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0066470004
Tumor
-0.3
CPT0010110003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0006950001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0088710001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0078840001
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0012180003
Tumor
-0.5
CPT0065930003
Tumor
-0.5
CPT0086370003
Normal
-0.5
CPT0069000003
Tumor
-0.6
CPT0025610001
Normal
-0.6
CPT0063330001
Normal
-0.6
CPT0081620001
Normal
-0.6
CPT0077310003
Tumor
-0.6
CPT0025170003
Tumor
-0.6
CPT0006730001
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0023710001
Normal
-0.6
CPT0092800003
Normal
-0.7
CPT0001260009
Tumor
-0.7
CPT0088500001
Normal
-0.7
CPT0063640001
Normal
-0.7
CPT0000660001
Normal
-0.7
CPT0013790003
Normal
-0.7
CPT0001220008
Tumor
-0.7
CPT0065820001
Normal
-0.7
CPT0010170001
Normal
-0.8
CPT0077500001
Normal
-0.8
CPT0092160003
Tumor
-0.8
CPT0078660003
Tumor
-0.8
CPT0001350001
Normal
-0.8
CPT0026420001
Normal
-0.8
CPT0023360001
Normal
-0.9
CPT0088900003
Tumor
-0.9
CPT0078670001
Normal
-0.9
CPT0000790001
Normal
-0.9
CPT0025920001
Normal
-1.0
CPT0017850003
Tumor
-1.0
CPT0001540009
Tumor
-1.0
CPT0002270011
Tumor
-1.1
CPT0001510001
Normal
-1.1
CPT0092740003
Normal
-1.1
CPT0066480003
Tumor
-1.2
CPT0065450001
Normal
-1.2
CPT0001230001
Normal
-1.2
CPT0007470001
Normal
-1.2
CPT0086970003
Normal
-1.2
CPT0092310003
Normal
-1.3
CPT0079510001
Normal
-1.4
CPT0014350001
Normal
-1.4
CPT0066430001
Normal
-1.4
CPT0088920001
Normal
-1.5
CPT0007870001
Normal
-1.5
CPT0012570003
Normal
-1.5
CPT0089040001
Normal
-1.5
CPT0066520001
Normal
-1.5
CPT0012770003
Normal
-1.5
CPT0069190001
Normal
-1.6
CPT0086830003
Normal
-1.6
CPT0092190003
Normal
-1.6
CPT0064400001
Normal
-1.6
CPT0024680001
Normal
-1.6
CPT0001270001
Normal
-1.6
CPT0025060001
Normal
-1.6
CPT0020020001
Normal
-1.7
CPT0012090003
Normal
-1.7
CPT0012290003
Normal
-1.7
CPT0069010001
Normal
-1.7
CPT0079430001
Normal
-1.8
CPT0076350001
Normal
-1.8
CPT0088570001
Normal
-1.9
CPT0019160001
Normal
-1.9
CPT0000890001
Normal
-1.9
CPT0087050003
Normal
-1.9
CPT0014130001
Normal
-1.9
CPT0018250001
Normal
-2.0
CPT0079000001
Normal
-2.0
CPT0075170001
Normal
-2.0
CPT0077140001
Normal
-2.1
CPT0084560003
Tumor
-2.1
CPT0001550001
Normal
-2.1
CPT0079180003
Tumor
-2.2
CPT0012640003
Normal
-2.2
CPT0014470001
Normal
-2.2
CPT0084590001
Normal
-2.4
CPT0077320001
Normal
-2.7
CPT0079300001
Normal
-2.7
CPT0006530001
Normal
-2.9
CPT0012920003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0009080003
Normal
N/A
CPT0009060003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
