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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
78.7
nTPM
GTEx:
78.7
nTPM
FANTOM5:
193.1
Scaled Tags Per Million
Pig:
61.4
nTPM
Mouse:
78.8
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
78.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 78.7
Samples: 105
Max nTPM: 122.9
Min nTPM: 31.3
Std nTPM: 16.1
Median nTPM:
379_1
60 years, male
122.9
162_1
79 years, female
112.7
6_1
73 years, female
110.9
142_1
61 years, female
108.4
115_1
83 years, male
107.9
315_1
62 years, female
106.4
447_1
81 years, male
106.3
17_1
71 years, male
102.8
266_1
85 years, male
101.4
32_1
67 years, male
101.0
265_1
87 years, male
100.8
491_1
89 years, female
99.3
384_1
83 years, male
99.1
120_1
70 years, female
97.2
126_1
63 years, male
96.8
145_1
84 years, male
96.8
42_1
85 years, male
95.7
109_1
81 years, female
95.0
490_1
67 years, female
93.6
396_1
62 years, male
93.5
386_1
76 years, male
92.9
117_1
61 years, male
92.5
9_1
66 years, female
92.4
99_1
64 years, male
91.6
314_1
67 years, male
89.6
324_1
76 years, male
89.2
173_1
67 years, male
88.4
229_1
69 years, female
88.2
375_1
74 years, female
88.2
2_1
77 years, female
88.0
35_1
74 years, female
86.2
348_1
84 years, male
86.1
43_1
64 years, female
85.9
89_1
63 years, male
85.5
149_1
88 years, male
85.1
468_1
89 years, male
84.2
307_1
66 years, female
84.1
18_1
88 years, male
83.9
415_1
77 years, female
83.2
347_1
72 years, male
82.8
218_1
71 years, female
82.7
119_1
70 years, female
81.8
139_1
64 years, female
81.8
313_1
79 years, female
81.7
526_1
61 years, male
81.0
4_1
88 years, female
80.3
503_1
68 years, male
80.0
349_1
83 years, male
79.3
413_1
59 years, female
78.4
177_1
74 years, male
78.3
246_1
77 years, male
78.1
499_1
55 years, female
78.0
237_1
82 years, male
77.7
506_1
65 years, male
77.6
153_1
70 years, female
77.4
414_1
84 years, female
77.1
295_1
61 years, female
76.4
351_1
91 years, male
76.4
243_1
75 years, male
76.2
480_1
63 years, male
76.0
452_1
88 years, female
75.9
317_1
60 years, male
75.7
217_1
76 years, male
75.3
404_1
82 years, female
74.4
254_1
77 years, female
74.3
81_1
67 years, male
74.1
286_1
68 years, female
73.8
354_1
81 years, female
72.5
356_1
87 years, female
72.3
264_1
73 years, female
71.1
350_1
84 years, female
70.1
377_1
82 years, female
69.6
308_1
70 years, female
69.3
189_1
76 years, male
69.2
137_1
83 years, male
69.1
389_1
86 years, female
69.1
318_1
68 years, male
68.9
352_1
62 years, male
68.2
291_1
76 years, male
68.1
172_1
72 years, female
67.6
353_1
82 years, female
66.9
355_1
70 years, female
66.9
292_1
71 years, male
66.5
319_1
81 years, male
66.5
251_1
78 years, male
65.3
518_1
75 years, female
65.2
335_1
73 years, female
64.4
288_1
66 years, female
64.0
316_1
62 years, male
63.8
466_1
57 years, female
63.8
425_1
59 years, female
62.0
321_1
62 years, female
61.4
376_1
75 years, female
60.9
501_1
88 years, male
60.5
163_1
78 years, male
59.1
394_1
75 years, female
58.2
311_1
78 years, male
57.9
517_1
88 years, male
55.6
406_1
79 years, male
55.1
322_1
76 years, male
51.1
405_1
91 years, male
50.9
41_1
94 years, female
49.7
320_1
89 years, female
49.0
293_1
68 years, female
44.8
495_1
57 years, female
31.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
