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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
74.0
nTPM
HPA Brain:
47.8
nTPM
GTEx:
74.0
nTPM
FANTOM5:
266.6
Scaled Tags Per Million
Pig:
68.6
nTPM
Mouse:
20.3
nTPM
Allen mouse:
0.3
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.8
Sample id
Sample description
nTPM
Amygdala nTPM: 47.8
2695
Female, age 67, right hemisphere
63.1
2514
Male, age 75, right hemisphere
51.9
2814
Male, age 76, right hemisphere
47.0
1987
Female, age 91, left hemisphere
40.7
2517
Female, age 94, left hemisphere
36.4
Basal amygdala nTPM: 37.5
2827
Female, age 67, right hemisphere
50.6
2609
Male, age 75, right hemisphere
38.2
1955
Male, age 76, both hemispheres
37.5
2685
Female, age 94, left hemisphere
37.0
2110
Male, age 80, left hemisphere
35.6
2243
Female, age 91, right hemisphere
26.2
Central amygdala nTPM: 45.0
2826
Female, age 94, left hemisphere
59.3
2515
Male, age 75, right hemisphere
50.5
1905
Male, age 76, both hemispheres
42.9
2239
Male, age 80, left hemisphere
38.1
2701
Female, age 91, right hemisphere
34.4
Corticomedial amygdala nTPM: 35.2
2535
Female, age 67, right hemisphere
39.5
2428
Male, age 75, right hemisphere
39.3
2829
Male, age 80, left hemisphere
36.4
2240
Male, age 76, both hemispheres
34.0
2242
Female, age 91, right hemisphere
33.9
2429
Female, age 94, left hemisphere
28.0
Lateral amygdala nTPM: 45.5
2830
Female, age 67, right hemisphere
65.3
2516
Male, age 75, right hemisphere
52.9
2534
Female, age 94, left hemisphere
44.0
1883
Male, age 76, both hemispheres
42.7
2256
Male, age 80, left hemisphere
39.8
2255
Female, age 91, right hemisphere
28.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 74.0
Samples: 152
Max nTPM: 154.2
Min nTPM: 32.3
Std nTPM: 19.8
Median nTPM: 68.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
154.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
141.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
137.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
126.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
124.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
123.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
122.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
116.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
114.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
112.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
110.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
104.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
104.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
103.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
100.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
98.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
98.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
96.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
95.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
92.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
92.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
91.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
90.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
90.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
90.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
89.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
89.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
88.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
88.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
86.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
85.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
84.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
84.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
82.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
82.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
82.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
82.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
81.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
81.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
81.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
80.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
80.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
79.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
79.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
79.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
79.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
78.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
77.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
77.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
77.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
77.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
77.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
76.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
76.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
75.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
74.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
74.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
74.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
74.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
74.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
74.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
74.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
73.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
73.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
72.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
72.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
72.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
71.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
71.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
70.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
70.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
70.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
69.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
69.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
69.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
68.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
68.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
68.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
68.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
68.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
68.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
67.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
67.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
67.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
67.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
66.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
66.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
66.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
66.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
66.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
65.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
65.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
65.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
65.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
65.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
64.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
64.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
64.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
64.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
64.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
64.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
64.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
64.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
63.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
62.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
62.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
61.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
60.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
60.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
60.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
60.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
60.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
60.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
59.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
59.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
59.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
59.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
58.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
58.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
58.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
58.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
58.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
58.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
58.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
58.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
57.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
57.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
57.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
57.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
56.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
56.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
56.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
56.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
54.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
54.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
54.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
54.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
54.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
54.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
54.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
53.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
52.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
52.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
51.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
50.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
50.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
48.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
48.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
34.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
32.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
20.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 20.3
Samples: 4
Max nTPM: 21.8
Min nTPM: 18.2
Sample A
Male
18.2
Sample B
Male
21.1
Sample C
Female
20.0
Sample D
Female
21.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.