HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.6 nTPM
HPA Brain:33.6 nTPM
GTEx:31.6 nTPM
FANTOM5:33.1 Scaled Tags Per Million
Pig:90.9 nTPM
Mouse:97.2 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035450Antibody HPA035451
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
1898 Male, age 80, left hemisphere 30.5
1855 Male, age 76, left hemisphere 29.2
2529 Female, age 94, left hemisphere 28.4
2621 Female, age 67, right hemisphere 28.4
2148 Female, age 91, left hemisphere 28.1
1911 Female, age 85, right hemisphere 26.6
Dentate gyrus
nTPM: 25.9
2010 Male, age 76, both hemispheres 28.9
2530 Female, age 94, left hemisphere 27.7
1927 Female, age 91, both hemispheres 25.9
2531 Female, age 67, both hemispheres 25.4
2246 Female, age 85, both hemispheres 24.9
2528 Male, age 74, both hemispheres 22.5
Entorhinal gyrus
nTPM: 28.2
2764 Male, age 80, right hemisphere 33.1
1938 Female, age 85, left hemisphere 30.2
2686 Male, age 75, right hemisphere 27.8
2613 Female, age 94, left hemisphere 26.8
2117 Female, age 91, right hemisphere 25.9
1787 Male, age 76, left hemisphere 25.6
Hippocampus, CA1
nTPM: 29.4
2045 Male, age 76, both hemispheres 35.0
2749 Male, age 80, left hemisphere 33.7
1873 Female, age 85, both hemispheres 29.4
2527 Male, age 74, both hemispheres 28.9
2082 Female, age 91, right hemisphere 20.1
Hippocampus, CA2
nTPM: 29.5
2249 Male, age 74, both hemispheres 35.6
2437 Female, age 94, left hemisphere 32.1
1963 Male, age 80, left hemisphere 29.2
1892 Male, age 76, both hemispheres 28.5
1940 Female, age 85, left hemisphere 26.0
2113 Female, age 91, right hemisphere 25.4
Hippocampus, CA3
nTPM: 33.6
2436 Male, age 74, both hemispheres 60.2
2137 Male, age 80, left hemisphere 32.2
2620 Female, age 94, left hemisphere 28.8
2861 Female, age 67, both hemispheres 27.1
1891 Female, age 85, both hemispheres 26.9
1867 Male, age 76, both hemispheres 26.6
Parahippocampal cortex
nTPM: 28.3
1850 Male, age 80, both hemispheres 34.0
1933 Female, age 85, both hemispheres 30.5
2018 Male, age 76, both hemispheres 30.5
2250 Female, age 67, right hemisphere 28.9
2692 Male, age 74, both hemispheres 28.6
2622 Female, age 67, right hemisphere 27.8
1990 Female, age 91, right hemisphere 27.3
2532 Female, age 72, left hemisphere 27.1
2245 Female, age 91, both hemispheres 25.1
2693 Female, age 94, both hemispheres 23.1
Perirhinal gyrus
nTPM: 29.8
1794 Male, age 80, right hemisphere 32.5
1841 Female, age 85, right hemisphere 31.7
1847 Female, age 91, left hemisphere 31.1
2521 Female, age 94, right hemisphere 28.1
2848 Male, age 76, right hemisphere 25.4
Subiculum
nTPM: 27.0
2619 Male, age 74, both hemispheres 30.4
2438 Female, age 94, left hemisphere 29.7
1977 Female, age 85, both hemispheres 26.9
2042 Male, age 76, both hemispheres 26.3
1901 Male, age 80, both hemispheres 26.0
2729 Female, age 91, right hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 31.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.6
Samples: 197

Max nTPM: 66.5
Min nTPM: 16.1
Std nTPM: 6.8
Median nTPM: 31.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 59.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 51.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 47.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 45.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 44.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 43.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 43.6
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 42.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 42.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 41.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.1
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 33.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 90.9
Pig sample Sample description nTPM
Subiculum
nTPM: 76.8
Samples: 4

Max nTPM: 95.8
Min nTPM: 66.2
Sample A Female 95.8
Sample B Female 68.8
Sample C Male 76.4
Sample D Male 66.2
Dorsal hippocampus
nTPM: 91.0
Samples: 4

Max nTPM: 117.4
Min nTPM: 73.3
Sample A Female 117.4
Sample B Female 79.9
Sample C Male 93.2
Sample D Male 73.3
Entorhinal cortex
nTPM: 81.5
Samples: 4

Max nTPM: 86.9
Min nTPM: 69.0
Sample A Female 86.0
Sample B Female 86.9
Sample C Male 83.9
Sample D Male 69.0
Ventral hippocampus
nTPM: 85.6
Samples: 4

Max nTPM: 108.4
Min nTPM: 61.0
Sample A Female 84.7
Sample B Female 61.0
Sample C Male 108.4
Sample D Male 88.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 97.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.0
Samples: 4

Max nTPM: 102.0
Min nTPM: 85.6
Sample A Male 92.1
Sample B Male 100.4
Sample C Female 102.0
Sample D Female 85.6
Hippocampal formation
nTPM: 97.2
Samples: 4

Max nTPM: 112.3
Min nTPM: 87.1
Sample A Male 112.3
Sample B Male 87.1
Sample C Female 95.3
Sample D Female 94.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
71662900 Antisense, RP_050927_04_F04, Mouse strain C57BL/6J (56 days, male) 2.2

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