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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4G is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
11.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
5.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
4.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
4.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4G is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
113.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
94.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
64.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
50.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
44.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
37.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
37.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
35.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
34.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
30.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
30.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
30.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
28.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
28.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
28.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
27.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
27.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
27.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
22.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
22.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
22.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
21.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
21.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
20.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
19.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
19.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
12.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
11.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
11.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
11.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
10.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
10.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
10.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
10.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
10.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
9.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
9.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
9.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
9.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
9.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
9.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
8.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
8.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
8.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
8.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
8.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
8.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
8.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
7.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
7.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
7.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
7.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
7.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
7.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
7.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
7.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
7.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
7.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
6.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
5.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
5.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
5.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
5.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
5.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
5.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
5.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
5.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
5.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
5.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
5.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
5.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
4.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
4.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
4.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
4.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
4.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
4.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
4.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
4.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
4.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
4.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
4.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
4.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
3.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
3.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
3.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
3.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
3.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
3.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
2.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
2.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
2.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
2.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
2.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
1.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
1.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
1.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
0.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4G is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
40.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
29.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
24.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
23.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
22.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
14.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
13.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
13.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
12.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
10.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
10.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
9.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
9.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
9.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
9.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
9.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
8.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
8.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
7.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
7.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
7.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
7.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
7.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
7.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
6.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
6.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
6.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
5.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
3.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
3.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
3.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
3.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
3.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
3.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
2.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4G is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
82.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
76.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
64.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
54.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
51.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
49.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
49.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
47.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
46.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
44.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
40.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
40.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
37.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
37.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
37.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
34.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
31.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
30.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
29.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
28.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
28.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
27.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
27.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
27.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
25.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
23.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
23.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
22.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
22.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
22.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
21.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
20.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
18.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
18.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
17.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
17.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
14.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
12.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
11.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
11.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
11.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
10.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
10.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
10.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
9.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
9.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
7.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
7.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
7.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
5.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
4.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
4.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
3.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
3.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
3.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
3.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
