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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM38B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
71.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
62.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
57.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
56.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
52.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
52.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
51.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
50.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
49.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
40.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
28.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
20.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
19.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
18.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
13.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM38B is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
122.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
109.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
103.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
98.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
90.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
85.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
84.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
80.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
79.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
79.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
78.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
75.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
74.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
73.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
72.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
72.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
70.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
69.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
69.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
68.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
68.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
67.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
67.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
66.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
66.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
66.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
66.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
65.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
64.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
63.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
63.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
63.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
63.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
62.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
62.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
60.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
60.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
60.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
60.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
58.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
57.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
57.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
56.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
56.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
56.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
55.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
55.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
55.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
55.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
54.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
54.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
53.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
53.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
52.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
52.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
52.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
52.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
52.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
52.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
51.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
51.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
51.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
50.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
50.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
49.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
48.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
48.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
48.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
48.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
48.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
47.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
47.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
47.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
47.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
47.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
46.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
46.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
46.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
46.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
46.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
45.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
45.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
45.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
45.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
44.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
44.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
43.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
43.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
43.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
43.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
42.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
42.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
42.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
42.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
42.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
42.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
42.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
41.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
41.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
41.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
41.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
41.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
40.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
40.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
40.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
40.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
40.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
40.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
40.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
39.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
39.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
39.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
39.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
39.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
38.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
38.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
38.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
38.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
38.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
38.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
37.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
37.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
37.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
37.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
37.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
37.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
37.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
37.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
36.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
36.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
35.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
35.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
35.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
35.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
35.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
34.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
34.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
33.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
33.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
33.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
33.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
33.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
32.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
32.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
32.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
32.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
32.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
32.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
31.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
31.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
30.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
30.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
30.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
30.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
30.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
30.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
30.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
29.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
29.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
29.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
29.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
29.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
28.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
28.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
27.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
27.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
27.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
27.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
25.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
25.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
24.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
24.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
24.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
23.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
23.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
23.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
23.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
22.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
21.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
21.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
21.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
20.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
19.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
18.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
17.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
12.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
9.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
7.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
7.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
6.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
6.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
5.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
4.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
3.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
3.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
3.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
2.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
2.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM38B is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
94.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
89.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
79.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
73.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
71.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
68.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
66.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
62.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
61.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
59.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
56.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
56.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
53.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
51.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
49.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
48.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
48.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
48.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
46.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
44.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
43.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
43.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
40.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
39.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
38.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
37.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
33.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
33.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
32.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
29.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
29.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
29.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
28.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
28.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
22.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
22.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
20.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
8.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
8.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
7.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
7.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
5.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
5.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
4.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
3.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
3.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM38B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
78.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
60.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
56.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
50.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
49.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
47.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
45.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
44.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
40.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
38.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
36.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
33.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
32.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
32.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
30.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
30.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
30.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
30.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
28.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
28.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
26.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
25.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
23.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
23.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
23.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
23.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
21.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
20.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
20.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
19.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
19.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
19.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
18.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
17.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
15.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
15.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
13.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
13.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
9.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
9.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
8.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
7.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
7.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
7.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
7.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
7.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
7.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
6.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
6.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
6.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
5.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
5.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
5.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
5.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
5.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
5.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
4.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
4.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
4.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
4.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
3.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
3.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
3.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
3.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079270003
Tumor
2.8
CPT0092290003
Tumor
1.4
CPT0082010001
Normal
1.4
CPT0015810003
Tumor
1.3
CPT0079180003
Tumor
1.2
CPT0010170001
Normal
1.2
CPT0078930003
Tumor
1.1
CPT0015730003
Tumor
1.1
CPT0021240003
Tumor
1.0
CPT0012900004
Tumor
1.0
CPT0079000001
Normal
0.9
CPT0078660003
Tumor
0.8
CPT0014350001
Normal
0.8
CPT0092160003
Tumor
0.8
CPT0001230001
Normal
0.8
CPT0019130003
Tumor
0.8
CPT0064400001
Normal
0.7
CPT0089460004
Tumor
0.7
CPT0007870001
Normal
0.7
CPT0002350011
Tumor
0.6
CPT0014370004
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0001510001
Normal
0.5
CPT0000790001
Normal
0.5
CPT0087040003
Tumor
0.5
CPT0001500009
Tumor
0.4
CPT0069190001
Normal
0.4
CPT0007470001
Normal
0.4
CPT0088690003
Tumor
0.4
CPT0026420001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0023710001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0092310003
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0020020001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0092790003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0086370003
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0088710001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0078840001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0023360001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0012370003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0079410003
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0065750003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0081620001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0010160003
Tumor
-0.4
CPT0025050003
Tumor
-0.4
CPT0013790003
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0015910003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0076350001
Normal
-0.5
CPT0012920003
Normal
-0.5
CPT0066470004
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0025610001
Normal
-0.5
CPT0075170001
Normal
-0.6
CPT0025880003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0001260009
Tumor
-0.6
CPT0001540009
Tumor
-0.6
CPT0024680001
Normal
-0.6
CPT0088630003
Tumor
-0.6
CPT0024670003
Tumor
-0.7
CPT0092730003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0086820003
Tumor
-0.8
CPT0001340003
Tumor
-0.8
CPT0020120003
Tumor
-0.8
CPT0000780007
Tumor
-0.8
CPT0000870016
Tumor
-0.8
CPT0086030003
Tumor
-0.8
CPT0088970003
Tumor
-0.8
CPT0092190003
Normal
-0.8
CPT0075130003
Tumor
-0.9
CPT0084560003
Tumor
-0.9
CPT0076330003
Tumor
-1.0
CPT0077490003
Tumor
-1.0
CPT0065430003
Tumor
-1.2
CPT0011240003
Tumor
-1.2
CPT0065690003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0089020003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0011410003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0012090003
Normal
N/A
CPT0078530001
Normal
N/A
CPT0065930003
Tumor
N/A
CPT0012180003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0012290003
Normal
N/A
CPT0088480003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
