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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYL6 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1863.8
Number of samples
349
Samples
Sample
Description
TPM
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
5091.7
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
4755.0
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
4459.5
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
4191.5
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
4176.6
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
4135.8
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
4049.0
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
4012.8
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
3804.6
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
3786.6
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
3772.6
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
3765.9
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
3699.4
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
3663.5
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
3565.2
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
3541.5
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
3466.4
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
3334.9
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
3323.5
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
3286.8
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
3255.1
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
3247.9
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
3238.7
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
3223.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
3210.9
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
3155.8
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
3138.5
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
3128.2
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
3108.2
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
3107.9
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
3074.4
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
3062.7
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
3045.2
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
3039.3
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
3032.2
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
3027.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
3020.8
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2979.4
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
2955.8
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
2900.4
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
2899.2
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
2898.4
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
2893.5
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
2876.0
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
2864.7
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
2863.8
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
2829.6
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
2813.8
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
2806.8
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
2785.2
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
2770.4
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2767.9
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
2764.2
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
2750.6
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
2750.1
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
2714.6
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
2668.1
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
2658.5
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
2658.5
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
2658.3
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
2630.3
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2629.5
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
2566.8
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
2552.3
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
2545.6
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
2530.2
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
2516.3
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
2495.0
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2464.4
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
2457.2
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
2449.9
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
2445.3
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
2443.1
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
2430.4
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
2390.7
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
2381.5
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2377.3
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
2368.4
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2362.9
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
2336.8
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
2319.4
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
2317.8
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
2299.1
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
2297.3
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
2285.5
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2282.2
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
2278.6
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
2271.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2258.9
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
2250.8
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2215.2
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
2199.3
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
2190.4
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
2181.5
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
2166.4
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
2161.7
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
2161.0
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
2157.1
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
2122.0
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
2121.6
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
2116.1
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
2092.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
2091.6
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
2081.0
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
2079.5
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
2077.4
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
2074.1
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2069.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
2067.6
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2056.1
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
2034.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
2029.0
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
2026.6
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2025.3
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1987.7
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1986.9
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
1985.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
1984.2
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1974.8
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1968.3
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1952.2
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1948.0
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1947.8
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1942.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1939.6
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1937.3
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1936.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1917.9
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1912.4
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1908.6
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1906.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
1904.2
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1903.7
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1901.6
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1895.3
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1892.2
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1882.1
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1875.8
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1873.8
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
1873.8
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
1868.6
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1866.2
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1865.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1850.6
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
1849.6
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
1849.4
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1847.1
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1846.9
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1842.0
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1830.3
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1826.3
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
1814.1
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1802.9
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
1801.5
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1800.0
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
1797.4
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1776.5
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1772.0
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1758.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1758.4
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1758.2
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
1744.5
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
1733.7
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1732.8
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1731.7
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1731.3
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1727.4
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1720.5
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1713.2
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1712.4
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1707.3
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1703.2
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1699.3
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1698.2
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1696.0
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1688.0
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
1687.8
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
1687.1
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1684.1
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1682.6
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
1675.4
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
1670.9
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1668.9
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1666.9
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1666.5
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1662.9
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
1661.1
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1655.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
1651.1
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
1646.8
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1643.1
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1640.3
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
1636.2
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
1627.9
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1621.8
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1620.6
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1618.1
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1612.9
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1612.5
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1608.4
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
1606.6
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1595.2
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1584.3
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
1558.8
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1558.3
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1544.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
1531.3
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1522.6
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1518.5
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
1511.2
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1501.6
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1500.0
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1486.2
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1485.5
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
1483.4
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1482.2
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1475.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1473.1
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
1456.0
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1454.0
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1446.7
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1439.9
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
1437.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1424.5
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
1415.7
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1412.9
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1411.7
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1408.7
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1408.3
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1401.5
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1399.2
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1399.1
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1394.9
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1394.4
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1391.2
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1387.7
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1387.5
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1383.4
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
1382.1
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
1369.2
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1366.6
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1366.4
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1356.2
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1350.9
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1345.4
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
1339.7
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1339.4
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1335.9
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1333.1
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
1326.3
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1322.8
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
1319.1
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1315.8
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
1313.6
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1312.3
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1306.2
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1298.8
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1289.5
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1287.9
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1275.0
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
1268.2
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
1262.7
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1260.0
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1258.2
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1252.8
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
1246.4
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
1245.2
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1240.8
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1240.8
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
1239.2
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
1239.0
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1237.7
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
1235.2
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1235.1
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1234.9
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1234.6
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1232.5
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1218.9
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1215.5
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1213.0
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1207.3
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1202.5
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
1190.2
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1188.2
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1183.6
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
1180.9
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1167.1
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1166.8
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1166.0
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1164.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1161.0
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1157.5
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1155.7
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1149.1
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1142.3
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1142.3
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1136.7
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1126.1
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1123.2
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1119.9
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1115.3
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
1108.4
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1103.7
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
1098.7
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
1096.0
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1088.9
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
1079.9
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
1069.3
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1063.5
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
1058.6
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1051.8
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
1044.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1038.9
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1025.1
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1024.8
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
1019.6
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1012.4
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1006.4
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1004.9
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
1001.7
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
965.7
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
956.6
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
953.8
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
952.0
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
946.2
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
941.2
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
929.5
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
927.7
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
924.9
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
916.0
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
912.7
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
896.4
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
855.1
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
853.5
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
847.9
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
847.5
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
840.1
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
819.3
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
818.0
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
798.9
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
797.4
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
788.4
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
786.6
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
771.0
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
731.6
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
709.6
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
657.5
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
636.6
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MYL6 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2111.3
Number of samples
81
Samples
Sample
Description
TPM
DO46453
0 years, female, NA, stage:III, dead, 3294 days
4894.8
DO46333
0 years, female, NA, stage:III, dead, 359 days
4827.8
DO46576
0 years, female, NA, stage:III, alive, 133 days
4174.1
DO46346
0 years, female, NA, stage:III, dead, 1187 days
3715.0
DO46366
0 years, female, NA, stage:III, dead, 2054 days
3651.8
DO46581
0 years, female, NA, stage:III, dead, 408 days
3582.7
DO46392
0 years, female, NA, stage:III, dead, 628 days
3424.3
DO46370
0 years, female, NA, stage:III, dead, 1727 days
3301.4
DO46448
0 years, female, NA, stage:III, dead, 654 days
3244.5
DO46560
0 years, female, NA, stage:IV, dead, 286 days
3161.1
DO46468
0 years, female, NA, stage:III, alive, 2776 days
3160.8
DO46390
0 years, female, NA, stage:III, dead, 374 days
3158.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
3000.7
DO46368
0 years, female, NA, stage:III, dead, 2879 days
2961.8
DO46508
0 years, female, NA, stage:III, dead, 2101 days
2728.5
DO46566
0 years, female, NA, stage:III, dead, 673 days
2685.8
DO46586
0 years, female, NA, stage:III, dead, 1019 days
2660.1
DO46463
0 years, female, NA, stage:III, dead, 2451 days
2650.9
DO46350
0 years, female, NA, stage:III, dead, 886 days
2618.6
DO46380
0 years, female, NA, stage:III, dead, 1423 days
2587.1
DO46372
0 years, female, NA, stage:III, dead, 1326 days
2572.2
DO46412
0 years, female, NA, stage:III, dead, 597 days
2546.5
DO46374
0 years, female, NA, stage:III, dead, 1409 days
2492.8
DO46364
0 years, female, NA, stage:III, dead, 806 days
2417.2
DO46352
0 years, female, NA, stage:III, dead, 677 days
2402.7
DO46386
0 years, female, NA, stage:III, dead, 1162 days
2388.6
DO46342
0 years, female, NA, stage:III, dead, 1398 days
2383.3
DO46551
0 years, female, NA, stage:III, dead, 1055 days
2320.7
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
2295.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
2293.7
DO46611
0 years, female, NA, stage:III, dead, 734 days
2293.0
DO46382
0 years, female, NA, stage:IV, dead, 311 days
2266.9
DO46348
0 years, female, NA, stage:IV, dead, 287 days
2255.4
DO46329
0 years, female, NA, stage:III, dead, 1699 days
2237.3
DO46591
0 years, female, NA, stage:III, dead, 195 days
2145.1
DO46376
0 years, female, NA, stage:III, dead, 1430 days
2135.7
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
2133.0
DO46344
0 years, female, NA, stage:III, dead, 642 days
2088.5
DO46432
0 years, female, NA, stage:III, alive, 2218 days
2072.9
DO46358
0 years, female, NA, stage:III, dead, 423 days
2049.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
2019.9
DO46330
0 years, female, NA, stage:III, dead, 684 days
1959.1
DO46332
0 years, female, NA, stage:III, dead, 689 days
1902.5
DO46378
0 years, female, NA, stage:III, alive, 843 days
1896.2
DO46528
0 years, female, NA, stage:III, alive, 6139 days
1890.2
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1833.8
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1817.6
DO46597
0 years, female, NA, stage:III, dead, 393 days
1790.1
DO46325
0 years, female, NA, stage:III, dead, 477 days
1780.4
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1769.1
DO46568
0 years, female, NA, stage:III, dead, 320 days
1749.7
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
1738.5
DO46606
0 years, female, NA, stage:III, alive, 804 days
1718.3
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1627.4
DO46571
0 years, female, NA, stage:III, dead, 243 days
1623.2
DO46328
0 years, female, NA, stage:III, dead, 972 days
1604.4
DO46402
0 years, female, NA, stage:III, dead, 511 days
1601.9
DO46334
0 years, female, NA, stage:III, dead, 496 days
1584.5
DO46354
0 years, female, NA, stage:III, dead, 843 days
1578.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
1570.0
DO46398
0 years, female, NA, stage:III, alive, 437 days
1566.8
DO46327
0 years, female, NA, stage:III, dead, 184 days
1401.1
DO46336
0 years, female, NA, stage:IV, dead, 664 days
1394.1
DO46561
0 years, female, NA, stage:III, dead, 195 days
1388.2
DO46588
0 years, female, NA, stage:III, dead, 438 days
1385.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
1334.9
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1333.9
DO46396
0 years, female, NA, stage:III, dead, 583 days
1322.8
DO46384
0 years, female, NA, stage:III, dead, 614 days
1262.3
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1220.4
DO46400
0 years, female, NA, stage:III, dead, 719 days
1208.9
DO46404
0 years, female, NA, stage:III, dead, 690 days
1181.7
DO46331
0 years, female, NA, stage:III, dead, 612 days
1099.8
DO46362
0 years, female, NA, stage:III, dead, 1639 days
1085.5
DO46326
0 years, female, NA, stage:III, dead, 701 days
1076.6
DO46408
0 years, female, NA, stage:III, dead, 489 days
1061.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
854.8
DO46436
0 years, female, NA, stage:III, alive, 3193 days
846.7
DO46518
0 years, female, NA, stage:III, alive, 2960 days
707.7
DO46546
0 years, female, NA, stage:III, dead, 1889 days
662.7
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
591.1
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.6
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
1.3
340a3769-3031-41ae-bb08-a2f696_D2
Normal
1.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
1.0
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.9
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.8
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.8
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.8
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.8
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.8
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.8
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.7
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.7
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.7
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.7
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.7
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.6
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.6
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.6
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.6
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.5
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.5
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.5
15524912-685a-47ce-a824-567848_D2
Tumor
0.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.4
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.4
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.4
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.4
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.4
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.4
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.3
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.3
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.3
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.3
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.3
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.3
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.2
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.2
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.2
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.2
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.1
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.1
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.1
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.1
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.1
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.1
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.1
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.0
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.0
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.0
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.0
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.0
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.0
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.0
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.0
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.0
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.0
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.0
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.1
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.1
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.1
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.1
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.1
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.2
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.2
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.2
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.2
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.2
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.2
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.2
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.3
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.3
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.3
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.3
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.4
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.4
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.4
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.4
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.4
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.4
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.4
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.4
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.5
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.5
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.5
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.5
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.5
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.5
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.6
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.6
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.6
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.6
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.6
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.8
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.8
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.0
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.